| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,008,473 | +G | intergenic (+40/‑193) | b4555 → / → yigM | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,008,472 | 1 | . | G | 97.6% | 582.2 / 5.5 | 165 | intergenic (+39/‑194) | b4555/yigM | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (4/0); new base G (86/75); total (90/75) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.27e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.81e-01 | |||||||||||
Only 100 of 167 total aligned reads displayed.
AACTGGCTACAG‑CTGAAGGATTG‑ATTGCGTT‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑‑GGGAA‑A‑GCTGCATTATGGGCAGTGGCCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑GAAGTGATTGGTACTAATGCCGACGACGCGGTGC > NC_000913/4008399‑4008558 | actgggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATggg < 1:6583209/89‑1 (MQ=255)actgggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATggg < 2:2071073/89‑1 (MQ=255)actgggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATggg < 2:2992138/89‑1 (MQ=255)actgggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATggg > 1:409368/5‑93 (MQ=255) ctgggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGc > 1:2280110/4‑93 (MQ=255) ctgggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGc > 1:4536471/4‑93 (MQ=255) gggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAg < 2:2523121/92‑1 (MQ=255) gggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAg < 1:2402609/92‑1 (MQ=255) gggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAg > 2:3677025/2‑93 (MQ=255) ggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGt > 2:6397383/1‑93 (MQ=255) gCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTg > 2:786339/1‑93 (MQ=255) cTACAGCCTGAAGGATTGTATTGCGTTTGGTGGCGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTgc < 2:1228998/93‑2 (MQ=255) cTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTgc < 2:795572/93‑2 (MQ=255) tACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTgcg > 2:1902341/1‑91 (MQ=255) gccTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGGGAA‑G‑GCTGCATTATGGGCAGTGCgcacc > 1:5931997/3‑93 (MQ=255) gccTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCgcacc > 2:3643001/3‑93 (MQ=255) gccTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCgcacc > 2:5720606/3‑93 (MQ=255) cTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGGGAACG‑GCTGCATTATGGGCAGAGCgcacca > 2:856378/1‑93 (MQ=255) cTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAg < 1:5836693/93‑1 (MQ=255) cTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAg < 1:4041548/93‑1 (MQ=255) tGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGc > 2:2011403/1‑93 (MQ=255) tGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGc < 1:5078385/93‑1 (MQ=255) tGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGc > 1:866450/1‑93 (MQ=255) gAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCg < 2:410613/93‑1 (MQ=255) gAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCg > 1:4902761/1‑93 (MQ=255) gAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCg > 2:3864395/1‑93 (MQ=255) aGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGTCAGTGCGCACCAGCGtt > 1:1197039/1‑92 (MQ=255) tttggtgACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCAt < 2:5152570/89‑1 (MQ=255) tttggtgACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCAt > 2:6403989/5‑93 (MQ=255) tttggtgACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCAt < 1:1056897/89‑1 (MQ=255) ttggtgACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATc < 2:335385/90‑1 (MQ=255) ttggtgACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATc > 2:4167514/4‑93 (MQ=255) tggtgACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGAGCTTCATcc > 2:2521224/3‑93 (MQ=255) tggtgACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATcc < 2:3941578/91‑1 (MQ=255) ggtgACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATccc > 2:4886988/2‑93 (MQ=255) gtgACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCg < 1:921788/93‑1 (MQ=255) tgACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGa > 1:2185073/1‑93 (MQ=255) tgACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATCATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGa > 2:6247931/1‑93 (MQ=255) aCGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGc < 2:1770585/93‑1 (MQ=255) aCGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGc > 2:931356/1‑93 (MQ=255) cGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCt < 1:737491/93‑1 (MQ=255) ggATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑gg > 1:3896910/1‑92 (MQ=255) ggATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑gg > 2:2527060/1‑92 (MQ=255) ggATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑gg > 1:5501570/1‑92 (MQ=255) ggATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑gg > 2:172112/1‑92 (MQ=255) gATGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑gga > 2:5522726/1‑91 (MQ=255) aTGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑ggaa < 1:302638/93‑4 (MQ=255) tGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑ggaag < 1:1068601/93‑5 (MQ=255) tGAACGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑ggaag > 2:2414163/1‑89 (MQ=255) aaCGACGCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTg > 2:2852590/1‑93 (MQ=255) acgacgCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGa < 1:1753517/93‑1 (MQ=255) acgacgCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGa < 2:5431799/93‑1 (MQ=255) cgacgCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGAt < 1:3177658/93‑1 (MQ=255) cgacgCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGAt > 1:5113939/1‑93 (MQ=255) cgacgCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGAt > 2:3203999/1‑93 (MQ=255) gacgCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCCCCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGAtt < 2:6547914/93‑1 (MQ=255) gacgCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGAtt < 2:3756621/93‑1 (MQ=255) gacgCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGAtt < 1:2244435/93‑1 (MQ=255) acgCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTg < 2:4805245/93‑1 (MQ=255) acgCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTg > 2:515563/1‑93 (MQ=255) cgCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTgg < 2:5347832/93‑1 (MQ=255) gCCGAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGt > 1:1206236/1‑93 (MQ=255) gAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACt > 1:1742587/1‑93 (MQ=255) gAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACt > 1:2977761/1‑93 (MQ=255) gAAATGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACt > 2:608246/1‑93 (MQ=255) aaaTGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTa > 2:3050470/1‑93 (MQ=255) aaTGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTaa > 1:535230/1‑93 (MQ=255) aTGCTGTTGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAAt < 2:5670322/93‑1 (MQ=255) aTGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAAt < 2:2542082/93‑1 (MQ=255) aTGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAAt < 2:3317426/93‑1 (MQ=255) tGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATg < 2:5953053/93‑1 (MQ=255) tGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATg < 1:6184572/93‑1 (MQ=255) tGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATg > 2:6099992/1‑93 (MQ=255) tGCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATg > 2:4729384/1‑93 (MQ=255) gCTGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGc < 1:2924265/93‑1 (MQ=255) tGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcg < 2:3704378/93‑1 (MQ=255) tGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcg > 1:6401371/1‑93 (MQ=255) tGTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcg > 1:3625383/1‑93 (MQ=255) gTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcga < 1:3422428/93‑1 (MQ=255) gTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcga < 1:4260896/93‑1 (MQ=255) gTCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcga < 1:5663612/93‑1 (MQ=255) tCGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcgac < 2:3028737/93‑1 (MQ=255) cGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcgacg < 1:3548998/93‑1 (MQ=255) cGATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcgacg > 1:523193/1‑93 (MQ=255) gATGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcgacga > 2:1573723/1‑93 (MQ=255) aTGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCgacgac > 1:168750/1‑93 (MQ=255) aTGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCgacgac > 1:499561/1‑93 (MQ=255) aTGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCgacgac < 2:1135102/93‑1 (MQ=255) aTGGCG‑GGGAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCgacgac > 1:5701826/1‑93 (MQ=255) ggcggggAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGAcgc > 1:4753811/5‑93 (MQ=255) ggcggggAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGAcgc < 1:4408746/89‑1 (MQ=255) gcggggAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGAcgcg > 1:558129/4‑93 (MQ=255) gcggggAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGAcgcg > 2:452360/4‑93 (MQ=255) gcggggAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGAcgcg > 1:1820823/4‑93 (MQ=255) cggggAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCgg > 2:1961610/3‑93 (MQ=255) cggggAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCgg < 2:5793374/91‑1 (MQ=255) ggggAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGt < 1:2670173/92‑1 (MQ=255) ggggAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGt < 2:3844288/92‑1 (MQ=255) ggAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGc > 1:4608500/1‑93 (MQ=255) ggAA‑AGGCTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGc < 2:3052035/93‑1 (MQ=255) | AACTGGCTACAG‑CTGAAGGATTG‑ATTGCGTT‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑‑GGGAA‑A‑GCTGCATTATGGGCAGTGGCCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑GAAGTGATTGGTACTAATGCCGACGACGCGGTGC > NC_000913/4008399‑4008558 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |