New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3349258 =13 (0.050)303 (1.170) 136/184 0.1 95.9% coding (1403/2331 nt) arcB aerobic respiration sensor‑response protein
?NC_000913 = 3349263 NA (NA)coding (1398/2331 nt) arcB aerobic respiration sensor‑response protein

Only 100 of 292 total aligned reads displayed.

GGTTGAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTC  >  NC_000913/3349173‑3349355
                                                                                          |                                                                                            
acctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGc                                                                                            >  1:1068344‑M1/86‑93 (MQ=255)
acctttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGc                                                                                            >  1:3257852‑M1/86‑93 (MQ=255)
   tttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAgg                                                                                         <  1:5109949‑M1/11‑1 (MQ=255)
   tttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAgg                                                                                         >  2:1013496‑M1/83‑93 (MQ=255)
    ttgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGt                                                                                        >  2:1587011‑M1/82‑93 (MQ=255)
     tgccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGtt                                                                                       >  2:3293837‑M1/81‑93 (MQ=255)
      gccctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGttt                                                                                      <  2:3901805‑M1/14‑1 (MQ=255)
        cctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTAc                                                                                    <  2:2823980‑M1/16‑1 (MQ=255)
        cctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTAc                                                                                    <  1:1541859‑M1/16‑1 (MQ=255)
        cctgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTAc                                                                                    <  1:1019561‑M1/16‑1 (MQ=255)
        ccggttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTAc                                                                                    >  2:2813739‑M1/78‑93 (MQ=255)
          tgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCg                                                                                  <  2:317793‑M1/18‑1 (MQ=255)
          tgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCg                                                                                  <  2:5125241‑M1/18‑1 (MQ=255)
          tgttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCg                                                                                  <  1:2613933‑M1/18‑1 (MQ=255)
           gttcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGc                                                                                 <  1:6274387‑M1/19‑1 (MQ=255)
             tcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCa                                                                               >  2:926511‑M1/73‑93 (MQ=255)
             tcgctggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCa                                                                               >  1:285961‑M1/73‑93 (MQ=255)
                 tggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGAc                                                                           >  1:4523165‑M1/69‑93 (MQ=255)
                  ggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACt                                                                          <  2:117963‑M1/26‑1 (MQ=255)
                  ggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACt                                                                          <  2:2176308‑M1/26‑1 (MQ=255)
                  ggtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACt                                                                          <  1:4572088‑M1/26‑1 (MQ=255)
                   gtaaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTg                                                                         >  2:5962340‑M1/67‑93 (MQ=255)
                     aaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTc                                                                       >  1:932925‑M1/65‑93 (MQ=255)
                     aaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTc                                                                       <  1:5468657‑M1/29‑1 (MQ=255)
                     aaccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTc                                                                       <  2:3997141‑M1/29‑1 (MQ=255)
                      accgtattatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCt                                                                      >  1:5052545‑M1/64‑93 (MQ=255)
                      accgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCt                                                                      >  2:458375‑M1/64‑93 (MQ=255)
                      accgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCt                                                                      >  1:1375862‑M1/64‑93 (MQ=255)
                       ccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCtt                                                                     >  2:176691‑M1/63‑93 (MQ=255)
                       ccgtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCtt                                                                     <  1:2033377‑M1/31‑1 (MQ=255)
                         gtaatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTc                                                                   <  2:4972675‑M1/33‑1 (MQ=255)
                         gtaatatcgccgcccatattgttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTc                                                                   >  1:4821198‑M1/61‑93 (MQ=255)
                          taatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCa                                                                  <  1:2696476‑M1/34‑1 (MQ=255)
                          taatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCa                                                                  >  2:2255184‑M1/60‑93 (MQ=255)
                           aatatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCAc                                                                 <  1:1292499‑M1/35‑1 (MQ=255)
                            atatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCAcc                                                                >  2:6095745‑M1/58‑93 (MQ=255)
                             tatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCt                                                               <  1:3498204‑M1/37‑1 (MQ=255)
                             tatcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCt                                                               >  2:4376186‑M1/57‑93 (MQ=255)
                              atcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTg                                                              >  1:3622203‑M1/56‑93 (MQ=255)
                              atcgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTg                                                              <  2:5798113‑M1/38‑1 (MQ=255)
                                cgccgcccatatttttcgccagactacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGt                                                            >  1:6521479‑M1/54‑93 (MQ=255)
                                cgccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGt                                                            >  2:1953949‑M1/54‑93 (MQ=255)
                                 gccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTa                                                           <  2:3210077‑M1/41‑1 (MQ=255)
                                  ccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTaa                                                          >  1:5860915‑M1/52‑93 (MQ=255)
                                  ccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTaa                                                          >  2:846458‑M1/52‑93 (MQ=255)
                                  ccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTaa                                                          >  1:3129616‑M1/52‑93 (MQ=255)
                                  ccgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTaa                                                          <  2:1467264‑M1/42‑1 (MQ=255)
                                   cgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAAt                                                         <  1:1655762‑M1/43‑1 (MQ=255)
                                   cgcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAAt                                                         <  2:3111049‑M1/43‑1 (MQ=255)
                                    gcccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATa                                                        <  1:5293552‑M1/44‑1 (MQ=255)
                                     cccatatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATAc                                                       <  2:635456‑M1/45‑1 (MQ=255)
                                       catatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACAt                                                     >  1:1208031‑M1/47‑93 (MQ=255)
                                        atatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCGTGACTGTCTTTCACCTGGTAATACATg                                                    >  2:2633480‑M1/46‑93 (MQ=255)
                                        atatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATg                                                    >  1:1137627‑M1/46‑93 (MQ=255)
                                        atatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATg                                                    <  1:890240‑M1/48‑1 (MQ=255)
                                         tatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATgg                                                   <  1:4909048‑M1/49‑1 (MQ=255)
                                         tatttttcgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATgg                                                   >  1:4292196‑M1/45‑93 (MQ=255)
                                                cgccagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAAt                                            >  1:2383494‑M1/38‑93 (MQ=255)
                                                   cagacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAAtttt                                         <  2:1924648‑M1/59‑1 (MQ=255)
                                                    agacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTa                                        >  2:1688554‑M1/34‑93 (MQ=255)
                                                    agacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTa                                        >  2:6630556‑M1/34‑93 (MQ=255)
                                                    agacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTa                                        <  2:2701226‑M1/60‑1 (MQ=255)
                                                     gacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTAt                                       <  2:78917‑M1/61‑1 (MQ=255)
                                                     gacgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTAt                                       >  1:5619926‑M1/33‑93 (MQ=255)
                                                      acgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATc                                      >  2:4225503‑M1/32‑93 (MQ=255)
                                                      acgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATc                                      >  2:4474557‑M1/32‑93 (MQ=255)
                                                      acgacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATc                                      >  2:4805845‑M1/32‑93 (MQ=255)
                                                        gacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCa                                    >  1:3984013‑M1/30‑93 (MQ=255)
                                                        gacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCa                                    >  1:407895‑M1/30‑93 (MQ=255)
                                                        gacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCa                                    <  1:6367554‑M1/64‑1 (MQ=255)
                                                        gacgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCa                                    >  1:4434622‑M1/30‑93 (MQ=255)
                                                         acgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTACTACATGGCGAAAATTTTATCCAg                                   <  1:4187925‑M1/65‑1 (MQ=255)
                                                         acgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAg                                   <  2:64705‑M1/65‑1 (MQ=255)
                                                          cgagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGc                                  >  1:2638685‑M1/28‑93 (MQ=255)
                                                           gagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCt                                 <  2:2522450‑M1/67‑1 (MQ=255)
                                                           gagaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCt                                 <  2:753681‑M1/67‑1 (MQ=255)
                                                             gaaacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCa                               >  1:1868532‑M1/25‑93 (MQ=255)
                                                               aacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATc                             >  2:5530764‑M1/23‑93 (MQ=255)
                                                               aacggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATc                             <  1:811199‑M1/71‑1 (MQ=255)
                                                                 cggccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCt                           >  2:2452557‑M1/21‑93 (MQ=255)
                                                                    ccagaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCg                        >  1:3007250‑M1/18‑93 (MQ=255)
                                                                      agaccaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGa                      <  2:6450800‑M1/78‑1 (MQ=255)
                                                                      agaccaataccggtgCCGGTGGCAGGGTTACCCCCATGACTGTTTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGa                      <  1:5385089‑M1/78‑1 (MQ=255)
                                                                        accaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAAt                    >  1:126159‑M1/14‑93 (MQ=255)
                                                                        accaataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAAt                    >  2:3831669‑M1/14‑93 (MQ=255)
                                                                          caataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGc                  >  2:2931527‑M1/12‑93 (MQ=255)
                                                                           aataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGcc                 >  2:2281203‑M1/11‑93 (MQ=255)
                                                                            ataccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCg                <  1:6074948‑M1/84‑1 (MQ=255)
                                                                            ataccggtgCCGGTGGCAGGTTTACCACCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCg                >  1:5355860‑M1/10‑93 (MQ=255)
                                                                             taccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGa               >  2:5392658‑M1/9‑93 (MQ=255)
                                                                             taccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGa               >  1:4442437‑M1/9‑93 (MQ=255)
                                                                              accggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGAt              >  1:1687141‑M1/8‑93 (MQ=255)
                                                                               ccggtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATa             >  2:1318479‑M1/7‑93 (MQ=255)
                                                                                  gtgCCGGTGTCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCa          >  2:5358800‑M1/4‑93 (MQ=255)
                                                                                  gtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCa          >  1:2193371‑M1/4‑93 (MQ=255)
                                                                                  gtgCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCa          >  1:5814163‑M1/4‑93 (MQ=255)
                                                                                    gCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCaga        <  1:2473157‑M1/92‑1 (MQ=255)
                                                                                    gCCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCaga        <  1:3816287‑M1/92‑1 (MQ=255)
                                                                                       ggTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTc     >  2:409450/1‑93 (MQ=255)
                                                                                          ggCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTCCGGAATGCCGATACCAGAGTCTTc  >  1:697349/1‑93 (MQ=255)
                                                                                          |                                                                                            
GGTTGAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAATACCGGTGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTC  >  NC_000913/3349173‑3349355

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.