BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,324,623	T→C	G618G (GGT→GGC)	yciQ →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,324,623	0	T	C	82.5%	456.8 / 92.5	200	G618G (GGT→GGC)	yciQ	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (13/22); new base C (78/87); total (91/109)
Fisher's exact test for biased strand distribution p-value = 3.51e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.81e-01

Only 100 of 221 total aligned reads displayed.

ATTGCCCGTAACGGCGTTTTATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGT  >  NC_000913/1324531‑1324714

aTTGCCCGTAACGGCGTTTTATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCggtggtggt                                                                                             <  1:4842946/93‑1 (MQ=255)

  tGCCCGTAACGGCGTTTTATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGgcgc                                                                                           <  1:5061616/93‑1 (MQ=255)

   gCCCGTAACGGCGTTTTATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCt                                                                                          <  1:4519411/93‑1 (MQ=255)

     ccGTAACGGCGTTTTATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTgg                                                                                        <  1:637242/93‑1 (MQ=255)

        tAACGGCGTTTTATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGCTggcgg                                                                                     <  2:4153243/93‑1 (MQ=255)

        tAACGGCGTTTTATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTggcgg                                                                                     >  1:1022413/1‑93 (MQ=255)

         aaCGGCGTTTTATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTggcggc                                                                                    <  1:3378939/93‑1 (MQ=255)

             gCGTTTTATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGgcggcggcg                                                                                >  2:6509733/1‑93 (MQ=255)

              cGTTTTATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGgcgc                                                                               <  1:548989/93‑1 (MQ=255)

                ttttATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCgg                                                                             >  1:1210042/1‑93 (MQ=255)

                ttttATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCgg                                                                             >  2:319818/1‑93 (MQ=255)

                ttttATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCgg                                                                             >  2:4943354/1‑93 (MQ=255)

                 tttATTCTCATTACAGACGCACCTAAGTTGCGGGGCTAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCggg                                                                            <  2:5231218/93‑1 (MQ=255)

                 tttATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCggg                                                                            >  1:914301/1‑93 (MQ=255)

                 tttATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCggg                                                                            <  1:6567190/93‑1 (MQ=255)

                  ttATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGt                                                                           <  1:2896242/93‑1 (MQ=255)

                   tATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTg                                                                          <  1:2963566/93‑1 (MQ=255)

                   tATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTg                                                                          <  2:2762759/93‑1 (MQ=255)

                    aTTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTgg                                                                         <  2:267549/93‑1 (MQ=255)

                     ttCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGc                                                                        >  2:2004517/1‑93 (MQ=255)

                     ttCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGc                                                                        <  2:6284976/93‑1 (MQ=255)

                     ttCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGc                                                                        <  2:3154260/93‑1 (MQ=255)

                       ctcATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCgg                                                                      >  1:3015421/1‑93 (MQ=255)

                       ctcATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCgg                                                                      >  2:5806703/1‑93 (MQ=255)

                       ctcATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCgg                                                                      >  1:3846511/1‑93 (MQ=255)

                        tcATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCggg                                                                     >  1:3463001/1‑92 (MQ=255)

                         cATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAg                                                                    >  1:4870155/1‑93 (MQ=255)

                         cATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAg                                                                    <  1:2337083/93‑1 (MQ=255)

                          aTTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAgg                                                                   <  2:5908092/93‑1 (MQ=255)

                           ttACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGc                                                                  >  1:4258442/1‑93 (MQ=255)

                           ttACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGc                                                                  <  2:2879809/93‑1 (MQ=255)

                           ttACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGc                                                                  >  1:2736023/1‑93 (MQ=255)

                           ttACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGGGGCGGAggg                                                                  >  2:4596274/1‑92 (MQ=255)

                             aCAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCgg                                                                <  1:1628379/93‑1 (MQ=255)

                             aCAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCgg                                                                <  2:4686417/93‑1 (MQ=255)

                             aCAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCgg                                                                <  1:988962/93‑1 (MQ=255)

                              cAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCggg                                                               >  1:5994488/1‑92 (MQ=255)

                               aGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCggtg                                                              >  1:4732662/1‑93 (MQ=255)

                                gACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCggtgg                                                             >  1:4415596/1‑93 (MQ=255)

                                gACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCggtgg                                                             >  1:2136489/1‑93 (MQ=255)

                                gACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCggtgg                                                             >  2:2149929/1‑93 (MQ=255)

                                 aCGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGAGGGTGGCGGAGGCggtggt                                                            <  1:4128931/93‑1 (MQ=255)

                                   gCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGtggtgg                                                          <  2:1375731/93‑1 (MQ=255)

                                   gCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGtggtgg                                                          <  1:4324433/93‑1 (MQ=255)

                                    cACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGtgggggg                                                         >  1:4954641/1‑92 (MQ=255)

                                    cACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGGGGGGGc                                                         >  2:4394950/1‑93 (MQ=255)

                                     aCCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCt                                                        <  1:1236090/93‑1 (MQ=255)

                                      ccTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGAGGCGGAGGCGGTGGTGGCTg                                                       >  2:5489061/1‑93 (MQ=255)

                                       cTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGGGGTGGCTgg                                                      >  2:3829858/1‑93 (MQ=255)

                                        tAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGGGGGGGCTGGt                                                     >  2:3571083/1‑93 (MQ=255)

                                         aaGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTa                                                    <  1:2454239/93‑1 (MQ=255)

                                              gCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGGGGGGGCTGGTAATTaa                                               >  2:3540091/1‑93 (MQ=255)

                                               cGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAg                                              <  2:1550010/93‑1 (MQ=255)

                                               cGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAg                                              <  2:881338/93‑1 (MQ=255)

                                               cGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAg                                              <  1:4573921/93‑1 (MQ=255)

                                                ggggCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGc                                             <  1:3708928/93‑1 (MQ=255)

                                                 gggCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCt                                            >  1:5836491/1‑93 (MQ=255)

                                                   gCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGa                                          <  2:4758614/93‑1 (MQ=255)

                                                   gCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGa                                          >  2:1312529/1‑93 (MQ=255)

                                                   gCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGa                                          <  1:6087869/93‑1 (MQ=255)

                                                    ccAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGAt                                         <  2:6065864/93‑1 (MQ=255)

                                                     cAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATg                                        >  1:1255129/1‑93 (MQ=255)

                                                      aaTACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGt                                       >  1:2194088/1‑93 (MQ=255)

                                                      aaTACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGt                                       >  1:787559/1‑93 (MQ=255)

                                                      aaTACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGt                                       <  2:2413632/93‑1 (MQ=255)

                                                      aaTACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGt                                       >  1:5347540/1‑93 (MQ=255)

                                                       aTACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGtt                                      <  2:2264598/93‑1 (MQ=255)

                                                       aTACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGtt                                      <  2:6190688/93‑1 (MQ=255)

                                                       aTACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGtt                                      >  1:3557613/1‑93 (MQ=255)

                                                        tACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTa                                     >  1:4113684/1‑93 (MQ=255)

                                                         aCCAGTTTGTTGGGGCGAAGTTATTTCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTaa                                    >  1:2697563/1‑93 (MQ=255)

                                                          ccAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAAt                                   <  1:4966881/93‑1 (MQ=255)

                                                          ccAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAAt                                   >  1:4046142/1‑93 (MQ=255)

                                                             gTTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGa                                >  1:1363376/1‑93 (MQ=255)

                                                              tttGTTGGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAAATAAGCTGATGTTAATCGaa                               >  1:2522899/1‑93 (MQ=255)

                                                              tttGTTGGGGAGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGaa                               <  1:1602167/93‑1 (MQ=255)

                                                               ttgttgGGGCGAAGTTATTCCGGTGGTGGCGATGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGaaa                              >  1:4180416/1‑93 (MQ=255)

                                                                 gttgGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACa                            <  2:5353129/93‑1 (MQ=255)

                                                                 gttgGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACa                            >  1:3874612/1‑93 (MQ=255)

                                                                 gttgGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACa                            <  2:3058306/93‑1 (MQ=255)

                                                                  ttgGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACaa                           <  1:6531137/93‑1 (MQ=255)

                                                                  ttgGGGCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACaa                           <  1:1752976/93‑1 (MQ=255)

                                                                       gCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCttt                      >  2:553857/1‑93 (MQ=255)

                                                                       gCGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCttt                      <  2:724465/93‑1 (MQ=255)

                                                                        cGAAGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTa                     <  2:2623416/93‑1 (MQ=255)

                                                                         gAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTaa                    <  1:1970817/93‑1 (MQ=255)

                                                                          aaGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAAc                   >  1:104492/1‑93 (MQ=255)

                                                                           aGTTATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAAcc                  <  2:2781453/93‑1 (MQ=255)

                                                                             ttATTGCGGTGGTGGCGGTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCAt                <  2:1073292/93‑1 (MQ=255)

                                                                             ttATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCAt                >  1:1917436/1‑93 (MQ=255)

                                                                             ttATTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCAt                >  2:3367238/1‑93 (MQ=255)

                                                                              tATTCCGGTGGTGGCGATGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATa               <  2:1498733/93‑1 (MQ=255)

                                                                               aTTCCGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATaa              <  1:3282741/93‑1 (MQ=255)

                                                                                  ccGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGa           >  2:5574342/1‑93 (MQ=255)

                                                                                  ccGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGa           <  2:1752646/93‑1 (MQ=255)

                                                                                  ccGGTGGTGGCGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGa           <  1:757401/93‑1 (MQ=255)

                                                                                     gtggtggtgCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAg        >  1:5297597/1‑93 (MQ=255)

                                                                                     gtggtggtgCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAg        <  2:6610430/93‑1 (MQ=255)

                                                                                      tggtggcgCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAgt       <  1:3078970/93‑1 (MQ=255)

                                                                                       ggtggtgCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAgtg      <  2:1841516/93‑1 (MQ=255)

ATTGCCCGTAACGGCGTTTTATTCTCATTACAGACGCACCTAAGTTGCGGGGCCAATACCAGTTTGTTGGGGCGAAGTTATTCCGGTGGTGGTGCTGGCGGCGGCGCGGGTGGCGGAGGCGGTGGTGGCTGGTAATTAAGCTGATGTTAATCGAAACAAGCTTTAACCATAAAGATAGTGTAGT  >  NC_000913/1324531‑1324714

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`