BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,447,942	C→T	V478I (GTC→ATC)	tynA ←	copper amine oxidase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,447,942	0	C	T	99.6%	970.1 / NA	249	V478I (GTC→ATC)	tynA	copper amine oxidase
Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (124/124); minor base G (1/0); total (125/124)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 254 total aligned reads displayed.

CGTTTTCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGACGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGGCACGC  >  NC_000913/1447852‑1448031

cGTTTTCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGt                                                                                         >  2:353144/1‑93 (MQ=255)

 gTTTTCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGtt                                                                                        >  1:5149609/1‑93 (MQ=255)

 gTTTTCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGtt                                                                                        <  2:2844987/93‑1 (MQ=255)

 gTTTTCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGtt                                                                                        <  2:1441102/93‑1 (MQ=255)

   tttCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTgg                                                                                      <  2:473112/93‑1 (MQ=255)

     tCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGc                                                                                    <  1:4086954/93‑1 (MQ=255)

     tCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGc                                                                                    <  1:1621534/93‑1 (MQ=255)

      cATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCt                                                                                   >  1:1824944/1‑93 (MQ=255)

       aTGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTg                                                                                  <  1:4062329/93‑1 (MQ=255)

       aTGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTg                                                                                  <  1:899452/93‑1 (MQ=255)

        tGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTgg                                                                                 >  2:3016563/1‑93 (MQ=255)

         ggAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGc                                                                                >  1:1072953/1‑93 (MQ=255)

         ggAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGc                                                                                <  1:6618614/93‑1 (MQ=255)

         ggAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGc                                                                                >  2:5273217/1‑93 (MQ=255)

            aGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCa                                                                             >  2:6058112/1‑93 (MQ=255)

            aGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCa                                                                             >  1:3186416/1‑93 (MQ=255)

             gATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCAt                                                                            <  2:5917335/93‑1 (MQ=255)

              aTCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCAtt                                                                           >  1:6252448/1‑93 (MQ=255)

               tCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCAttt                                                                          >  2:1762572/1‑93 (MQ=255)

               tCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCAttt                                                                          <  2:1203201/93‑1 (MQ=255)

                ccAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCCCCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTc                                                                         <  1:1736561/93‑1 (MQ=255)

                 cAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTcc                                                                        <  2:915790/93‑1 (MQ=255)

                 cAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTcc                                                                        >  2:2415561/1‑93 (MQ=255)

                 cAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTcc                                                                        <  2:2903999/93‑1 (MQ=255)

                  aGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCt                                                                       <  1:2935243/93‑1 (MQ=255)

                  aGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCt                                                                       >  1:198402/1‑93 (MQ=255)

                  aGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCt                                                                       <  1:5822524/93‑1 (MQ=255)

                  aGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCt                                                                       <  1:3036519/93‑1 (MQ=255)

                   gTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTg                                                                      >  2:4102864/1‑93 (MQ=255)

                   gTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTg                                                                      >  1:3417454/1‑93 (MQ=255)

                   gTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTg                                                                      >  2:3142443/1‑93 (MQ=255)

                     cAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGAt                                                                    <  2:1369310/93‑1 (MQ=255)

                        aaaTGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCt                                                                 <  2:3003456/93‑1 (MQ=255)

                         aaTGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCtt                                                                >  1:2709973/1‑93 (MQ=255)

                         aaTGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCtt                                                                <  1:1359428/93‑1 (MQ=255)

                         aaTGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCtt                                                                <  2:2284308/93‑1 (MQ=255)

                          aTGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTta                                                               <  1:22433/93‑1 (MQ=255)

                             tAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATAc                                                            <  1:3401964/93‑1 (MQ=255)

                             tAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATAc                                                            <  1:3807784/93‑1 (MQ=255)

                              aGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACt                                                           >  1:2462003/1‑93 (MQ=255)

                                tCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTcc                                                         >  1:5124737/1‑93 (MQ=255)

                                tCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTcc                                                         <  2:4025536/93‑1 (MQ=255)

                                 cATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTccg                                                        >  2:462653/1‑93 (MQ=255)

                                  aTAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTccgg                                                       <  2:441565/93‑1 (MQ=255)

                                   tAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTccggc                                                      >  2:361249/1‑93 (MQ=255)

                                   tAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTccggc                                                      <  1:6069094/93‑1 (MQ=255)

                                   tAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTccggc                                                      <  1:4235760/93‑1 (MQ=255)

                                   tAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTccggc                                                      >  2:1981063/1‑93 (MQ=255)

                                    aGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTccggcc                                                     <  2:6387074/93‑1 (MQ=255)

                                     gTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTccggccc                                                    >  1:2888506/1‑93 (MQ=255)

                                      ttACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTccggcccg                                                   <  1:3054085/93‑1 (MQ=255)

                                       tACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTccggcccgg                                                  >  1:3464103/1‑93 (MQ=255)

                                        aCCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTccggcccggc                                                 >  2:4208868/1‑93 (MQ=255)

                                        aCCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTccggcccggc                                                 >  1:4718435/1‑93 (MQ=255)

                                         cccACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTACCTGATGCTTATACTCCGGCCCGGCa                                                >  1:5361161/1‑93 (MQ=255)

                                          ccACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCAt                                               >  1:3858891/1‑93 (MQ=255)

                                           cACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATa                                              >  2:129862/1‑93 (MQ=255)

                                           cACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATa                                              >  2:4905162/1‑93 (MQ=255)

                                            aCTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATaa                                             >  2:5376942/1‑93 (MQ=255)

                                              tGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACg                                           >  1:5443652/1‑93 (MQ=255)

                                                tACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGAGGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGtt                                         >  2:4664171/1‑93 (MQ=255)

                                                 aCTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTc                                        >  2:5490208/1‑93 (MQ=255)

                                                   tGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCaa                                      >  1:2547471/1‑93 (MQ=255)

                                                   tGATCCAGCGCACCACTAACTCCCGGAGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCaa                                      >  1:5299589/1‑93 (MQ=255)

                                                    gATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCaaa                                     >  2:6469209/1‑93 (MQ=255)

                                                     aTCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAAt                                    >  1:279163/1‑93 (MQ=255)

                                                     aTCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAAt                                    <  2:3451438/93‑1 (MQ=255)

                                                      tCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATa                                   <  1:4025589/93‑1 (MQ=255)

                                                      tCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATa                                   >  2:5995325/1‑93 (MQ=255)

                                                       ccAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATAc                                  <  1:6001715/93‑1 (MQ=255)

                                                       ccAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATAc                                  <  2:3430527/93‑1 (MQ=255)

                                                       ccAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATAc                                  <  1:6283856/93‑1 (MQ=255)

                                                        cAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATAcc                                 <  2:1000300/93‑1 (MQ=255)

                                                        cAGCGCACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATAcc                                 <  1:2268937/93‑1 (MQ=255)

                                                          gcgcACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACcgc                               <  2:3879900/93‑1 (MQ=255)

                                                          gcgcACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACcgc                               >  2:4234465/1‑93 (MQ=255)

                                                            gcACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGa                             >  2:2186560/1‑93 (MQ=255)

                                                            gcACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGa                             <  2:153768/93‑1 (MQ=255)

                                                            gcACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGa                             <  1:5622254/93‑1 (MQ=255)

                                                            gcACCACTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGa                             >  1:1240088/1‑93 (MQ=255)

                                                             caccacTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGAt                            >  2:5692300/1‑93 (MQ=255)

                                                             caccacTAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGAt                            >  2:2104225/1‑93 (MQ=255)

                                                                   tAACTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGcgcg                      >  2:1348010/1‑93 (MQ=255)

                                                                    aaCTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGa                     >  1:924638/1‑93 (MQ=255)

                                                                     aCTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAg                    <  2:1941852/93‑1 (MQ=255)

                                                                      cTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAgg                   >  2:384593/1‑93 (MQ=255)

                                                                      cTCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAgg                   >  2:1703541/1‑93 (MQ=255)

                                                                       tCCCGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAggg                  <  1:4609906/93‑1 (MQ=255)

                                                                        ccgggCGTCCGGTACTGAGGTTGGGCTGGCCCATTTCCTGATGC‑TATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGAt                <  1:3133977/90‑1 (MQ=255)

                                                                        cccGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGa                 >  2:2611168/1‑93 (MQ=255)

                                                                         ccGGCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATGCCGCGATAGCGCGAGGGAt                <  1:6475615/93‑1 (MQ=255)

                                                                            gCGTTCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGAtctc             <  2:749626/93‑1 (MQ=255)

                                                                              gTTCGGTACTGATGTTGGGCTGGCTCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCa           >  2:5087262/1‑93 (MQ=255)

                                                                               ttCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCAt          >  1:1492553/1‑93 (MQ=255)

                                                                                tCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATc         <  1:258771/93‑1 (MQ=255)

                                                                                tCGGTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATc         <  2:3171304/93‑1 (MQ=255)

                                                                                   gTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGGc      >  2:4753484/1‑93 (MQ=255)

                                                                                   gTACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGGc      <  1:2103746/93‑1 (MQ=255)

                                                                                    tACTGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGGCa     <  1:1012665/93‑1 (MQ=255)

                                                                                       tGATGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGGCACGc  >  2:6586987/1‑93 (MQ=255)

CGTTTTCATGGAAGATCCAGTCAAAAATGTAGTCATAGTTACCCACTGTACTGATCCAGCGCACCACTAACTCCCGGCGTTCGGTACTGACGTTGGGCTGGCCCATTTCCTGATGCTTATACTCCGGCCCGGCATAACGTTCAAATACCGCGATAGCGCGAGGGATCTCCATCGGCACGC  >  NC_000913/1447852‑1448031

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`