BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,729,429	G→A	S773S (TCG→TCA)	lhr →	Lhr

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,729,429	0	G	A	100.0%	820.0 / NA	211	S773S (TCG→TCA)	lhr	Lhr
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (124/87); total (124/87)

Only 100 of 212 total aligned reads displayed.

TGACACCGATGGTAAATTGCCCGATGCCGCGATTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCGGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCACTCCGGGCCATCGCACCCCGCTTTGGC  >  NC_000913/1729339‑1729517

 gACACCGATGGTAAATTGCCCGATGCCGCGATTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCa                                                                                       >  2:5603108/1‑93 (MQ=255)

 gACACCGATGGTAAATTGCCCGATGCCGCGATTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCa                                                                                       >  2:2634057/1‑93 (MQ=255)

  acacCGATGGTAAATTGCCCGATGCCGCGATTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCAc                                                                                      <  1:5838325/93‑1 (MQ=255)

  acacCGATGGTAAATTGCCCGATGCCGCGATTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCAc                                                                                      >  1:3451334/1‑93 (MQ=255)

   cacCGATGGTAAATTGCCCGATGCCGCGATTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACt                                                                                     >  2:5997011/1‑93 (MQ=255)

    acCGATGGTAAATTGCCCGATGCCGCGATTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACtt                                                                                    >  2:1822469/1‑93 (MQ=255)

     ccGATGGTAAATTGCCCGATGCCGCGATTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACttt                                                                                   <  1:6022733/93‑1 (MQ=255)

     ccGATGGTAAATTGCCCGATGCCGCGATTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACttt                                                                                   <  1:1495517/93‑1 (MQ=255)

     ccGATGGTAAATTGCCCGATGCCGCGATTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACttt                                                                                   <  1:2382948/93‑1 (MQ=255)

       gATGGTAAATTGCCCGATGCCGCGATTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTc                                                                                 <  1:817773/93‑1 (MQ=255)

       gATGGTAAATTGCCCGATGCCGCGATTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTc                                                                                 >  2:3139114/1‑93 (MQ=255)

       gATGGTAAATTGCCCGATGCCGCGATTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTc                                                                                 <  1:2449535/93‑1 (MQ=255)

          ggTAAATTGCCCGATGCCGCGATTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTcgcc                                                                              >  1:1650831/1‑93 (MQ=255)

            tAAATTGCCCGATGCCGCGATTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTcgccgc                                                                            >  2:3334915/1‑93 (MQ=255)

             aaaTTGCCCGATGCCGCGATTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCgccgcc                                                                           <  2:6515068/93‑1 (MQ=255)

              aaTTGCCCGATGCCGCGATTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGccc                                                                          >  2:5677783/1‑93 (MQ=255)

                ttGCCCGATGCCGCGATTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGt                                                                        >  1:5279228/1‑93 (MQ=255)

                 tGCCCGATGCCGCGATTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGtt                                                                       <  2:1481892/93‑1 (MQ=255)

                  gCCCGATGCCGTGATTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGttt                                                                      >  1:2975580/1‑93 (MQ=255)

                   cccGATGCCGCGATTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGtttt                                                                     <  2:2826303/93‑1 (MQ=255)

                    ccGATGCCGCGATTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTc                                                                    <  1:1371266/93‑1 (MQ=255)

                     cGATGCCGCGATTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTcg                                                                   >  1:3304484/1‑93 (MQ=255)

                      gATGCCGCGATTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTcgc                                                                  <  2:1825924/93‑1 (MQ=255)

                      gATGCCGCGATTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTcgc                                                                  <  2:6374769/93‑1 (MQ=255)

                      gATGCCGCGATTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTcgc                                                                  >  2:6223582/1‑93 (MQ=255)

                       aTGCCGCGATTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTcgcg                                                                 >  1:2614958/1‑93 (MQ=255)

                         gCCGCGATTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGaa                                                               >  2:3204402/1‑93 (MQ=255)

                          ccGCGATTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAAt                                                              <  1:2718558/93‑1 (MQ=255)

                          ccGCGATTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAAt                                                              >  1:6061056/1‑93 (MQ=255)

                            gcgATTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATgc                                                            >  1:3837565/1‑93 (MQ=255)

                             cgATTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATgcg                                                           <  2:186941/93‑1 (MQ=255)

                               aTTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGcgcc                                                         >  1:4921218/1‑93 (MQ=255)

                               aTTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGcgcc                                                         <  1:1043529/93‑1 (MQ=255)

                               aTTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGcgcc                                                         >  1:2536781/1‑93 (MQ=255)

                               aTTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGcgcc                                                         >  2:2380836/1‑93 (MQ=255)

                                tttttttGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGcgccg                                                        >  2:6410057/1‑93 (MQ=255)

                                   ttttGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCcgcgc                                                     <  1:125335/93‑1 (MQ=255)

                                   ttttGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCcgcgc                                                     <  1:4986477/93‑1 (MQ=255)

                                     ttgtttgAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCgg                                                   <  2:4842450/93‑1 (MQ=255)

                                     ttgtttgAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCgg                                                   >  1:5646282/1‑93 (MQ=255)

                                      tgtttgAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCggg                                                  >  2:4247661/1‑93 (MQ=255)

                                      tgtttgAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCggg                                                  >  1:5151601/1‑93 (MQ=255)

                                       gtttgAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGc                                                 >  2:5202287/1‑93 (MQ=255)

                                         ttgAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCat                                               >  2:3641307/1‑93 (MQ=255)

                                           gAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCatta                                             >  2:3515084/1‑93 (MQ=255)

                                           gAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCatta                                             <  1:981799/93‑1 (MQ=255)

                                             aCCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCattatt                                           <  2:1029511/93‑1 (MQ=255)

                                             aCCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCattatt                                           >  1:862205/1‑93 (MQ=255)

                                              ccAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCAttatta                                          >  1:2861921/1‑93 (MQ=255)

                                              ccAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCAttatta                                          >  2:2123181/1‑93 (MQ=255)

                                                aGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAAt                                        >  1:3556849/1‑93 (MQ=255)

                                                aGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAAt                                        <  1:463162/93‑1 (MQ=255)

                                                aGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAAt                                        >  2:3089387/1‑93 (MQ=255)

                                                    aaGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCg                                    <  1:1172010/93‑1 (MQ=255)

                                                     aGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCgg                                   <  2:1214324/93‑1 (MQ=255)

                                                     aGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCgg                                   <  2:5260453/93‑1 (MQ=255)

                                                     aGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCgg                                   <  2:4074383/93‑1 (MQ=255)

                                                       ttGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCgggg                                 >  2:584305/1‑93 (MQ=255)

                                                       ttGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCgggg                                 >  2:1244507/1‑93 (MQ=255)

                                                       ttGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCgggg                                 >  2:228818/1‑93 (MQ=255)

                                                          ctgcAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGgcgc                              <  2:1932593/93‑1 (MQ=255)

                                                          ctgcAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGgcgc                              <  1:5890667/93‑1 (MQ=255)

                                                          ctgcAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGgcgc                              >  1:1532757/1‑93 (MQ=255)

                                                          ctgcAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGgcgc                              <  2:709468/93‑1 (MQ=255)

                                                            gcAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCAc                            >  2:4583142/1‑93 (MQ=255)

                                                            gcAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCAc                            <  2:5408245/93‑1 (MQ=255)

                                                             cAAATTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCACt                           >  2:4369800/1‑93 (MQ=255)

                                                               aaTTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCACTcc                         >  2:380218/1‑93 (MQ=255)

                                                               aaTTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCACTcc                         >  1:4849746/1‑93 (MQ=255)

                                                               aaTTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCACTcc                         <  1:6105433/93‑1 (MQ=255)

                                                               aaTTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCACTcc                         >  1:5406079/1‑93 (MQ=255)

                                                                aTTGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGTGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCACTCCg                        <  2:4663819/93‑1 (MQ=255)

                                                                 ttGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCACTCCgg                       <  2:351697/93‑1 (MQ=255)

                                                                  tGTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCACTCCggg                      <  1:4256439/93‑1 (MQ=255)

                                                                   gTCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCACTCCGGGc                     <  2:2925507/93‑1 (MQ=255)

                                                                    tCCGCGAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCACTCCGGGcc                    <  2:5156442/93‑1 (MQ=255)

                                                                      cgcgAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCACTCCGGGCCAt                  <  2:492185/93‑1 (MQ=255)

                                                                       gcgAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCACTCCGGGCCATc                 >  2:1143114/1‑93 (MQ=255)

                                                                       gcgAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCACTCCGGGCCATc                 <  1:6451754/93‑1 (MQ=255)

                                                                        cgAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCACTCCGGGCCATCg                >  2:2706469/1‑93 (MQ=255)

                                                                         gAGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCACTCCGGGCCATCGc               >  1:656403/1‑93 (MQ=255)

                                                                          aGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCACTCCGGGCCATCGCa              >  1:5218356/1‑93 (MQ=255)

                                                                          aGGCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCACTCCGGGCCATCGCa              <  1:1415965/93‑1 (MQ=255)

                                                                            gCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCACTCCGGGCCATCGCAcc            <  2:4093177/93‑1 (MQ=255)

                                                                            gCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCACTCCGGGCCATCGCAcc            >  2:4212864/1‑93 (MQ=255)

                                                                            gCGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCACTCCGGGCCATCGCAcc            >  2:6640809/1‑93 (MQ=255)

                                                                             cGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCACTCCGGGCCATCGCAccc           <  1:4582689/93‑1 (MQ=255)

                                                                             cGGTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCACTCCGGGCCATCGCAccc           <  2:119640/93‑1 (MQ=255)

                                                                              ggTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCACTCCGGGCCATCGCAcccc          <  2:1453414/93‑1 (MQ=255)

                                                                              ggTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCACTCCGGGCCATCGCAcccc          <  1:2045179/93‑1 (MQ=255)

                                                                               gTAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCACTCCGGGCCATCGCACCCCg         >  2:944768/1‑93 (MQ=255)

                                                                                tAGGCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCACTCCGGGCCATCGCACCCCGc        >  1:6274145/1‑93 (MQ=255)

                                                                                  ggCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCACTCCGGGCCATCGCACCCCGCtt      >  2:5495287/1‑93 (MQ=255)

                                                                                   gCAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCACTCCGGGCCATCGCACCCCGCttt     >  2:4545761/1‑93 (MQ=255)

                                                                                    cAGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCACTCCGGGCCATCGCACCCCGCTTTg    >  2:3660472/1‑93 (MQ=255)

                                                                                     aGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGTCGGGGCGCACTCCGGGCCATCGCACCCCGCTTTgg   >  2:4439165/1‑93 (MQ=255)

                                                                                     aGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCACTCCGGGCCATCGCACCCCGCTTTgg   >  2:2877026/1‑93 (MQ=255)

                                                                                     aGCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCACTCCGGGCCATCGCACCCCGCTTTgg   <  1:4896296/93‑1 (MQ=255)

                                                                                      gCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCACTCCGGGCCATCGCACCCCGCTTTGGc  <  1:4491881/93‑1 (MQ=255)

                                                                                      gCTCAGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCACTCCGGGCCATCGCACCCCGCTTTGGc  >  1:162728/1‑93 (MQ=255)

TGACACCGATGGTAAATTGCCCGATGCCGCGATTTTTTTGTTTGAACCAGAAAAGTTGCTGCAAATTGTCCGCGAGGCGGTAGGCAGCTCGGCACTTTTCGCCGCCCGTTTTCGCGAATGCGCCGCGCGGGCATTATTAATGCCGGGGCGCACTCCGGGCCATCGCACCCCGCTTTGGC  >  NC_000913/1729339‑1729517

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`