BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,786,195	T→C	L243L (TTG→CTG)	ydiA →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,786,195	0	T	C	83.1%	503.1 / 89.7	207	L243L (TTG→CTG)	ydiA	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (23/12); new base C (96/76); total (119/88)
Fisher's exact test for biased strand distribution p-value = 3.49e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.88e-01

Only 100 of 213 total aligned reads displayed.

ACGTCTGGCGGCGATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGATATCATGGGCCTTAG  >  NC_000913/1786104‑1786286

aCGTCTGGCGGCGATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCtt                                                                                            >  2:400775/1‑93 (MQ=255)

  gTCTGGCGGCGATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGt                                                                                          >  1:761523/1‑93 (MQ=255)

  gTCTGGCGGCGATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGt                                                                                          >  2:2288173/1‑93 (MQ=255)

   tCTGGCGGCGATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTa                                                                                         >  2:5652477/1‑93 (MQ=255)

    cTGGCGGCGATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTAc                                                                                        >  1:5821687/1‑93 (MQ=255)

      ggcggcGATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCg                                                                                      >  2:1007781/1‑93 (MQ=255)

       gcggcgATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGt                                                                                     >  2:3415697/1‑93 (MQ=255)

       gcggcgATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGt                                                                                     >  2:6585257/1‑93 (MQ=255)

        cggcgATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTa                                                                                    >  2:4574970/1‑93 (MQ=255)

         ggcgATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTaa                                                                                   >  1:110555/1‑93 (MQ=255)

         ggcgATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTaa                                                                                   <  1:1157467/93‑1 (MQ=255)

          gcgATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTAGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTaaa                                                                                  >  2:4311655/1‑93 (MQ=255)

            gATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTaaaaa                                                                                >  2:3814409/1‑93 (MQ=255)

             aTTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAAt                                                                               >  2:4967656/1‑93 (MQ=255)

              ttCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCTCGGAAGTGGAAGCCTTGTACCGTAAAAATc                                                                              >  1:364928/1‑93 (MQ=255)

                cgcgAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAg                                                                            <  2:2002911/93‑1 (MQ=255)

                 gcgAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGa                                                                           <  1:791975/93‑1 (MQ=255)

                 gcgAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGa                                                                           <  1:2345309/93‑1 (MQ=255)

                 gcgAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGa                                                                           >  1:6514061/1‑93 (MQ=255)

                  cgAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTAAAAATCAGAt                                                                          >  2:3328884/1‑93 (MQ=255)

                   gAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATc                                                                         <  1:14039/93‑1 (MQ=255)

                   gAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATc                                                                         >  1:1727746/1‑93 (MQ=255)

                   gAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATc                                                                         >  2:1294960/1‑93 (MQ=255)

                   gAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATc                                                                         <  2:3157403/93‑1 (MQ=255)

                   gAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATc                                                                         <  2:2563157/93‑1 (MQ=255)

                   gAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATc                                                                         >  1:1953291/1‑93 (MQ=255)

                    gggAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATcc                                                                        <  1:4917765/92‑1 (MQ=255)

                    aGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTAAAAATCAGATcc                                                                        >  2:4245263/1‑93 (MQ=255)

                    aGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATcc                                                                        <  2:3054632/93‑1 (MQ=255)

                       aaCGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTAAAAATCAGATCCCGt                                                                     <  1:6579447/93‑1 (MQ=255)

                        aCGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTg                                                                    >  2:3076809/1‑93 (MQ=255)

                           tCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATAAGATCCCGTGGAt                                                                 >  1:2852826/1‑93 (MQ=255)

                            cGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGAtt                                                                <  2:3028925/93‑1 (MQ=255)

                            cGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGAtt                                                                >  1:3296874/1‑93 (MQ=255)

                            cGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGAtt                                                                <  2:6448318/93‑1 (MQ=255)

                             gggAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTa                                                               >  2:3673114/1‑93 (MQ=255)

                              ggAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTaa                                                              >  1:5800130/1‑93 (MQ=255)

                                 gaACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTACAAATCAGATCCCGTGGATTAACAg                                                           >  2:3758701/1‑93 (MQ=255)

                                 gaACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAg                                                           >  2:1966723/1‑93 (MQ=255)

                                 gaACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAg                                                           >  2:6280813/1‑93 (MQ=255)

                                  aaCAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGt                                                          >  2:940460/1‑93 (MQ=255)

                                   aCAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTa                                                         <  2:6497854/93‑1 (MQ=255)

                                    cAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTAc                                                        <  1:4547473/93‑1 (MQ=255)

                                      gTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCa                                                      >  2:2861715/1‑93 (MQ=255)

                                      gTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCa                                                      >  1:459192/1‑93 (MQ=255)

                                       tCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCaa                                                     <  1:6212275/93‑1 (MQ=255)

                                        cGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAat                                                    <  1:5728892/93‑1 (MQ=255)

                                          cTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAatta                                                  <  2:1394406/93‑1 (MQ=255)

                                          cTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAatta                                                  >  1:735135/1‑93 (MQ=255)

                                           tATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAattat                                                 >  2:6196678/1‑93 (MQ=255)

                                            aTGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAattatt                                                >  1:2154791/1‑93 (MQ=255)

                                             tGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTc                                               >  2:112394/1‑93 (MQ=255)

                                              gCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCg                                              <  1:5568987/93‑1 (MQ=255)

                                               ccTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCgg                                             <  1:3679367/93‑1 (MQ=255)

                                                gtCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGt                                            >  1:6382193/2‑93 (MQ=255)

                                                cTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGt                                            <  1:5685216/93‑1 (MQ=255)

                                                cTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGt                                            >  2:1570970/1‑93 (MQ=255)

                                                cTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGt                                            <  2:6557584/93‑1 (MQ=255)

                                                 tCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTa                                           <  2:219600/93‑1 (MQ=255)

                                                 tCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTa                                           >  2:1629812/1‑93 (MQ=255)

                                                   gCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTaga                                         <  2:147522/93‑1 (MQ=255)

                                                     ttCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTagaag                                       >  1:3494521/1‑93 (MQ=255)

                                                      tCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTAGAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTagaaga                                      >  1:4271767/1‑93 (MQ=255)

                                                      tCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTagaaga                                      <  2:3995021/93‑1 (MQ=255)

                                                      tCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTagaaga                                      <  1:6069747/93‑1 (MQ=255)

                                                       tgTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAagag                                     <  2:2087172/92‑1 (MQ=255)

                                                       cGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAagag                                     <  1:4791274/93‑1 (MQ=255)

                                                        gTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAgaga                                    <  2:5236841/93‑1 (MQ=255)

                                                         tCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGAt                                   <  1:4509439/93‑1 (MQ=255)

                                                          cAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGAtt                                  >  1:4010673/1‑93 (MQ=255)

                                                           aGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTg                                 >  1:2708335/1‑93 (MQ=255)

                                                           aGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTg                                 >  2:6006451/1‑93 (MQ=255)

                                                           aGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTg                                 >  2:4068624/1‑93 (MQ=255)

                                                               cAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGccac                             >  2:4754225/1‑93 (MQ=255)

                                                               cAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGccac                             >  2:3469814/1‑93 (MQ=255)

                                                                aGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGccacc                            <  1:1249749/93‑1 (MQ=255)

                                                                aGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGccacc                            >  2:6075553/1‑93 (MQ=255)

                                                                aGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGccacc                            <  2:5600504/93‑1 (MQ=255)

                                                                aGGATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGccacc                            <  1:4362173/93‑1 (MQ=255)

                                                                 ggATGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGccccca                           >  1:3815200/1‑93 (MQ=255)

                                                                    tGGAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGa                        <  1:4461227/93‑1 (MQ=255)

                                                                      gAAGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATc                      <  2:1550470/93‑1 (MQ=255)

                                                                       aaGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATcc                     >  2:798236/1‑93 (MQ=255)

                                                                        aGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCt                    <  2:5949292/93‑1 (MQ=255)

                                                                        aGTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCt                    <  1:2042108/93‑1 (MQ=255)

                                                                         gTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTc                   >  1:1496539/1‑93 (MQ=255)

                                                                         gTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTc                   >  1:1549143/1‑93 (MQ=255)

                                                                         gTCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTc                   >  2:5748977/1‑93 (MQ=255)

                                                                          tCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCg                  >  1:3584002/1‑93 (MQ=255)

                                                                          tCGCGGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCg                  >  2:5355233/1‑93 (MQ=255)

                                                                            gcgGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGat                >  1:4146602/1‑93 (MQ=255)

                                                                            gcgGAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGat                <  2:5418024/93‑1 (MQ=255)

                                                                              ggAAGTGGAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGatat              >  2:2685330/1‑93 (MQ=255)

                                                                               gAAGTGGAAGCCTTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGATATc             >  1:3043020/1‑93 (MQ=255)

                                                                                    ggAAGCCCTGTACCGTAAAAATCAGATCTCGTGGATTAACAGTACCAATTATTCGGTCGAAGAGACTGCCACCAAGATCCTCGATATCATagg        >  2:2762249/1‑93 (MQ=255)

                                                                                    agAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGATATCATggg        >  2:2343184/2‑93 (MQ=255)

                                                                                     gAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGATATCATGGGc       >  2:2264062/1‑93 (MQ=255)

                                                                                     gAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGATATCATGGGc       >  2:2942955/1‑93 (MQ=255)

                                                                                     gAAGCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGATATCATGGGc       >  2:865538/1‑93 (MQ=255)

                                                                                        gCCCTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGATATCATGGGCCtt    >  1:240142/1‑93 (MQ=255)

ACGTCTGGCGGCGATTCGCGAGGAACGTCGGGAGAACAGTCGCTATGCCTCGCTTCGTCAGTGCAGGATGGAAGTCGCGGAAGTGGAAGCCTTGTACCGTAAAAATCAGATCCCGTGGATTAACAGTACCAATTATTCGGTAGAAGAGATTGCCACCAAGATCCTCGATATCATGGGCCTTAG  >  NC_000913/1786104‑1786286

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`