BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,815,038	T→C	Q41R (CAG→CGG)	ydjC ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,815,038	0	T	C	100.0%	747.7 / NA	206	Q41R (CAG→CGG)	ydjC	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (92/114); total (92/114)

Only 100 of 211 total aligned reads displayed.

GTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAA  >  NC_000913/1814948‑1815127

gTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGc                                                                                         >  1:852236/1‑93 (MQ=255)

 tCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGcc                                                                                        >  2:3227621/1‑93 (MQ=255)

      ggCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTc                                                                                   >  1:4907919/1‑93 (MQ=255)

      ggCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTc                                                                                   <  1:3794159/93‑1 (MQ=255)

         ttACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCAcc                                                                                <  2:2457745/93‑1 (MQ=255)

          tACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCa                                                                               <  2:4028935/93‑1 (MQ=255)

           aCCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAg                                                                              <  2:1060025/93‑1 (MQ=255)

                 aGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGTTCAATAGCCCGCCCATTCACCAGCGCcgt                                                                        <  2:3872200/93‑1 (MQ=255)

                 aGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCcgt                                                                        <  2:5141858/93‑1 (MQ=255)

                 aGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCcgt                                                                        <  1:3020593/93‑1 (MQ=255)

                  gTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCcgtc                                                                       >  2:4472202/1‑93 (MQ=255)

                  gTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCcgtc                                                                       <  1:6034976/93‑1 (MQ=255)

                  gTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCcgtc                                                                       >  1:2937563/1‑93 (MQ=255)

                   tAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCcgtcg                                                                      <  2:2116059/93‑1 (MQ=255)

                    aaGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCcgtcgt                                                                     <  2:5824506/93‑1 (MQ=255)

                      ggACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGtcgtcg                                                                   >  2:4979251/1‑93 (MQ=255)

                       gACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGa                                                                  <  2:4099678/93‑1 (MQ=255)

                       gACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGa                                                                  >  2:1145582/1‑93 (MQ=255)

                       gACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGa                                                                  <  2:3602300/93‑1 (MQ=255)

                       gACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGa                                                                  <  2:2192381/93‑1 (MQ=255)

                         cAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACg                                                                >  2:3055088/1‑93 (MQ=255)

                           aaGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTg                                                              >  1:6631134/1‑93 (MQ=255)

                                cATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAAt                                                         <  1:4958439/93‑1 (MQ=255)

                                 aTCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATc                                                        >  2:3268734/1‑93 (MQ=255)

                                 aTCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATc                                                        >  2:3392141/1‑93 (MQ=255)

                                  tCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATcc                                                       <  1:5836758/93‑1 (MQ=255)

                                  tCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATcc                                                       >  1:4377390/1‑93 (MQ=255)

                                     cTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCAt                                                    >  2:659928/1‑93 (MQ=255)

                                     cTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCAt                                                    <  2:5440097/93‑1 (MQ=255)

                                     cTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCAt                                                    <  2:1712027/93‑1 (MQ=255)

                                      tATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCAtt                                                   <  1:6622183/93‑1 (MQ=255)

                                      tATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCAtt                                                   >  2:323645/1‑93 (MQ=255)

                                         ggCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCg                                                >  2:3636270/1‑93 (MQ=255)

                                           ccAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGAc                                              <  2:6642071/93‑1 (MQ=255)

                                            cAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACa                                             >  1:1298204/1‑93 (MQ=255)

                                            cAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACa                                             >  1:3144883/1‑93 (MQ=255)

                                             aGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAg                                            <  1:5435936/93‑1 (MQ=255)

                                             aGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAg                                            <  2:1570232/93‑1 (MQ=255)

                                              gACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAgg                                           >  2:1942103/1‑93 (MQ=255)

                                              gACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAgg                                           >  1:2582439/1‑93 (MQ=255)

                                              gACTCGGGTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGAGACAgg                                           >  1:4414441/1‑93 (MQ=255)

                                               aCTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGc                                          <  1:4116825/93‑1 (MQ=255)

                                                cTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGcc                                         >  2:1913299/1‑93 (MQ=255)

                                                cTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGcc                                         <  1:1139032/93‑1 (MQ=255)

                                                cTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGcc                                         <  1:2697794/93‑1 (MQ=255)

                                                 tCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCt                                        <  2:670898/93‑1 (MQ=255)

                                                  cGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTc                                       <  2:834398/93‑1 (MQ=255)

                                                  cGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTc                                       <  1:3188839/93‑1 (MQ=255)

                                                   ggTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCg                                      <  1:2778933/93‑1 (MQ=255)

                                                    gTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGa                                     <  1:94920/93‑1 (MQ=255)

                                                    gTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGa                                     >  2:4253200/1‑93 (MQ=255)

                                                     ttCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGCCAATCCCATTGCGACAGGCCTCGAt                                    <  1:4748083/93‑1 (MQ=255)

                                                     ttCATCACGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGAt                                    <  2:2979200/93‑1 (MQ=255)

                                                      tcatcaCGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATa                                   <  1:6131200/93‑1 (MQ=255)

                                                       catcaCGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATaa                                  >  1:2113592/1‑93 (MQ=255)

                                                       catcaCGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATaa                                  >  2:5715066/1‑93 (MQ=255)

                                                        atcaCGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAAt                                 >  1:4486210/1‑93 (MQ=255)

                                                         tcaCGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATg                                >  1:6575882/1‑93 (MQ=255)

                                                          caCGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGc                               <  2:5964007/93‑1 (MQ=255)

                                                           aCGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGcc                              <  2:6261569/93‑1 (MQ=255)

                                                           aCGACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGcc                              >  2:4691430/1‑93 (MQ=255)

                                                             gACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGt                            >  2:1348487/1‑93 (MQ=255)

                                                             gACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGt                            <  2:540478/93‑1 (MQ=255)

                                                             gACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGt                            >  2:1232053/1‑93 (MQ=255)

                                                             gACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGt                            <  2:6141016/93‑1 (MQ=255)

                                                             gACTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGt                            <  1:4138033/93‑1 (MQ=255)

                                                              aCTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTa                           >  1:2870801/1‑93 (MQ=255)

                                                              aCTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTa                           <  2:4562072/93‑1 (MQ=255)

                                                              aCTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTa                           >  2:2593296/1‑93 (MQ=255)

                                                              aCTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTa                           <  1:646341/93‑1 (MQ=255)

                                                              aCTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTa                           >  2:852405/1‑93 (MQ=255)

                                                               cTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAg                          >  2:791959/1‑93 (MQ=255)

                                                               cTCAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAg                          <  1:2456991/93‑1 (MQ=255)

                                                                 cAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGtt                        >  2:2408898/1‑93 (MQ=255)

                                                                 cAACTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGtt                        >  2:6467763/1‑93 (MQ=255)

                                                                   aCTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCt                      >  2:6345667/1‑93 (MQ=255)

                                                                   aCTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCt                      <  1:893717/93‑1 (MQ=255)

                                                                   aCTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCt                      <  1:6510661/93‑1 (MQ=255)

                                                                    cTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTg                     >  2:1338894/1‑93 (MQ=255)

                                                                    cTGCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTg                     >  1:4811606/1‑93 (MQ=255)

                                                                      gCACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGAc                   <  2:5498575/93‑1 (MQ=255)

                                                                       cACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGAcc                  <  1:2254228/93‑1 (MQ=255)

                                                                       cACCGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGAcc                  <  1:2419757/93‑1 (MQ=255)

                                                                        gccGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCt                 <  2:3976613/92‑1 (MQ=255)

                                                                         ccGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCtt                <  2:1668225/93‑1 (MQ=255)

                                                                         ccGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCtt                >  1:6161286/1‑93 (MQ=255)

                                                                         ccGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCtt                >  2:2213486/1‑93 (MQ=255)

                                                                          cGCATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCttt               <  1:4637531/93‑1 (MQ=255)

                                                                            cATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCtttac             <  2:3211346/93‑3 (MQ=255)

                                                                            cATGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGc             >  1:1787866/1‑93 (MQ=255)

                                                                              tGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCtt           >  1:3972204/1‑93 (MQ=255)

                                                                              tGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCtt           >  1:2304578/1‑93 (MQ=255)

                                                                              tGGTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCtt           >  2:4414242/1‑93 (MQ=255)

                                                                               ggTCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTa          <  2:4870664/93‑1 (MQ=255)

                                                                                 tCAATAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAg        <  1:1490704/93‑1 (MQ=255)

                                                                                    aTAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCa     <  1:1104219/93‑1 (MQ=255)

                                                                                    aTAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCa     >  2:3526834/1‑93 (MQ=255)

                                                                                     tAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCaa    <  1:4542328/93‑1 (MQ=255)

                                                                                     tAGCCCGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCaa    <  1:5118196/93‑1 (MQ=255)

                                                                                       gcccgcccATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCaaaa  <  2:5988958/93‑1 (MQ=255)

GTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAA  >  NC_000913/1814948‑1815127

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`