Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,391,634 A→G V478A (GTG→GCG)  nuoL ← NADH dehydrogenase I chain L

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,391,6340AG85.9% 564.1 / 75.4 220V478A (GTG→GCG) nuoLNADH dehydrogenase I chain L
Reads supporting (aligned to +/- strand):  ref base A (10/21);  new base G (58/131);  total (68/152)
Fisher's exact test for biased strand distribution p-value = 8.37e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.67e-01

Only 100 of 226 total aligned reads displayed.

CCAGCAGAATGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGAGTTACCCCTTTC  >  NC_000913/2391545‑2391723
                                                                                         |                                                                                         
ccAGCAGAATGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAgcgcgc                                                                                        >  1:5319041/1‑93 (MQ=255)
 cagcagAATGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGcc                                                                                       <  1:1264049/93‑1 (MQ=255)
  agcagAATGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGccc                                                                                      <  2:1309431/93‑1 (MQ=255)
  agcagAATGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGccc                                                                                      <  1:3684245/93‑1 (MQ=255)
  agcagAATGCCAACCACCGCTACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGccc                                                                                      <  1:2971586/93‑1 (MQ=255)
   gcagAATGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCt                                                                                     >  2:2715956/1‑93 (MQ=255)
     agAATGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGc                                                                                   >  2:6000644/1‑93 (MQ=255)
     agAATGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGc                                                                                   <  1:558550/93‑1 (MQ=255)
      gAATGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCa                                                                                  >  2:4292226/1‑93 (MQ=255)
      gAATGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCCCCCTGCa                                                                                  >  1:4214828/1‑93 (MQ=255)
       aaTGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAg                                                                                 <  2:1006362/93‑1 (MQ=255)
       aaTGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAg                                                                                 <  1:1614443/93‑1 (MQ=255)
       aaTGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAg                                                                                 <  2:4604870/93‑1 (MQ=255)
         tGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAgcg                                                                               <  2:5361584/93‑1 (MQ=255)
          gCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCTCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAgcgg                                                                              <  2:5454611/93‑1 (MQ=255)
           ccGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAgcggc                                                                             <  1:101691/93‑1 (MQ=255)
           ccGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAgcggc                                                                             >  1:3080920/1‑93 (MQ=255)
           ccGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAgcggc                                                                             <  1:2647681/93‑1 (MQ=255)
           ccGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGACCTGCAgcggc                                                                             >  1:4462058/1‑93 (MQ=255)
             gACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGcggcgg                                                                           >  1:3572027/1‑93 (MQ=255)
                caccGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTAc                                                                        <  2:4445778/93‑1 (MQ=255)
                caccGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTAc                                                                        <  2:5915655/93‑1 (MQ=255)
                caccGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTAc                                                                        <  2:5319786/93‑1 (MQ=255)
                caccGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTAc                                                                        >  1:2377606/1‑93 (MQ=255)
                 accGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACa                                                                       >  1:456604/1‑93 (MQ=255)
                  ccGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACaa                                                                      >  2:169785/1‑93 (MQ=255)
                   cgcgACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAAt                                                                     <  1:6134308/93‑1 (MQ=255)
                    gcgACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATc                                                                    <  1:19920/93‑1 (MQ=255)
                     cgACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCa                                                                   >  2:3823858/1‑93 (MQ=255)
                       aCCACGCCATAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGt                                                                 <  2:147323/93‑1 (MQ=255)
                       aCCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGTAGCACGCCCTGCAGCGGCGGTACAATCAGt                                                                 >  1:5093163/1‑93 (MQ=255)
                       aCCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGt                                                                 >  1:889245/1‑93 (MQ=255)
                       aCCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGt                                                                 >  1:184396/1‑93 (MQ=255)
                        ccACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTg                                                                <  1:6075705/93‑1 (MQ=255)
                         cACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTgc                                                               <  1:3839440/93‑1 (MQ=255)
                         cACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTgc                                                               <  1:6245121/93‑1 (MQ=255)
                           cGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTgcgc                                                             >  1:4956497/1‑93 (MQ=255)
                            gCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCCGCGGTACAATCAGCGCGcc                                                            >  1:1499471/1‑93 (MQ=255)
                             ccAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCa                                                           >  1:1821545/1‑93 (MQ=255)
                             ccAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCa                                                           >  1:3229575/1‑93 (MQ=255)
                              cAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCaa                                                          >  2:1780137/1‑93 (MQ=255)
                               agagGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAAc                                                         <  1:694444/93‑1 (MQ=255)
                                gagGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACg                                                        <  1:6434468/93‑1 (MQ=255)
                                  ggTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGaa                                                      >  1:4025513/1‑93 (MQ=255)
                                  ggTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGaa                                                      <  1:4844668/93‑1 (MQ=255)
                                  ggTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGaa                                                      <  1:2047840/93‑1 (MQ=255)
                                  agTAATTTCCAGGATCAACATGCTGCCGTGCGACAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGaa                                                      <  2:4911280/92‑1 (MQ=255)
                                    tAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAgg                                                    <  1:2889742/93‑1 (MQ=255)
                                    tAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAgg                                                    <  1:6023042/93‑1 (MQ=255)
                                      aTTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTg                                                  <  1:1085902/93‑1 (MQ=255)
                                       tttCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTgg                                                 <  1:3712761/93‑1 (MQ=255)
                                       tttCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTgg                                                 <  1:3823913/93‑1 (MQ=255)
                                           cAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAg                                             <  2:558412/93‑1 (MQ=255)
                                             gggTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGGAAGGGGAAAGGa                                           >  1:3318010/1‑93 (MQ=255)
                                             gggTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGa                                           <  2:2281115/93‑1 (MQ=255)
                                             gggTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGa                                           <  1:2685676/93‑1 (MQ=255)
                                             gggTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGa                                           <  2:3697846/93‑1 (MQ=255)
                                               gTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATc                                         <  2:5552470/93‑1 (MQ=255)
                                                tCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATca                                        <  1:2074470/93‑1 (MQ=255)
                                                tCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATca                                        <  2:3142866/93‑1 (MQ=255)
                                                tCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATca                                        <  1:4124025/93‑1 (MQ=255)
                                                tCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATca                                        <  1:5202305/93‑1 (MQ=255)
                                                tCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATca                                        <  2:2420748/93‑1 (MQ=255)
                                                 cAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATcag                                       <  2:2849693/93‑1 (MQ=255)
                                                  aaCATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATcagc                                      >  2:6501066/1‑93 (MQ=255)
                                                  aaCATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATcagc                                      <  2:4491183/93‑1 (MQ=255)
                                                   aCATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATcagca                                     >  2:6602076/1‑93 (MQ=255)
                                                      tgctgcCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAgcagca                                  <  2:2216805/93‑1 (MQ=255)
                                                       gctgcCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGcac                                 <  1:2192768/93‑1 (MQ=255)
                                                         tgcCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACaa                               <  2:561215/93‑1 (MQ=255)
                                                         tgcCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACaa                               >  1:1733095/1‑93 (MQ=255)
                                                          gcCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAAt                              <  1:4697534/93‑1 (MQ=255)
                                                          gcCGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCACTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAAt                              >  2:3295230/1‑93 (MQ=255)
                                                          gcCGTGCGCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAAt                              <  2:2618822/93‑1 (MQ=255)
                                                           ccGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATc                             >  1:4256540/1‑93 (MQ=255)
                                                            cGTGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCa                            <  2:5031493/93‑1 (MQ=255)
                                                            cGTGCGCCAGTTCCGTCGTTTGCGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAg                           <  2:2379683/93‑1 (MQ=255)
                                                              tGCGCCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGc                          <  2:3467890/93‑1 (MQ=255)
                                                                cgcCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCgg                        <  2:5183441/93‑1 (MQ=255)
                                                                 gcCAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGc                       >  1:4872521/1‑93 (MQ=255)
                                                                   cAGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAg                     <  1:2269937/93‑1 (MQ=255)
                                                                    aGTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAgg                    <  2:3055946/93‑1 (MQ=255)
                                                                     gTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGc                   <  2:626325/93‑1 (MQ=255)
                                                                     gTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGc                   <  2:399874/93‑1 (MQ=255)
                                                                     gTTCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGc                   <  2:4398281/93‑1 (MQ=255)
                                                                      ttCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCt                  <  1:2632420/93‑1 (MQ=255)
                                                                      ttCCGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCt                  <  1:2489694/93‑1 (MQ=255)
                                                                      ttCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCt                  <  1:4505909/93‑1 (MQ=255)
                                                                      ttCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCt                  <  1:4382626/93‑1 (MQ=255)
                                                                      ttCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCt                  <  2:6240340/93‑1 (MQ=255)
                                                                        ccGTCGTTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCtgt                >  1:192459/1‑93 (MQ=255)
                                                                          gtcgtTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCtgtgg              >  1:6169696/1‑92 (MQ=255)
                                                                          gtcgtTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGa              <  2:689772/93‑1 (MQ=255)
                                                                          gtcgtTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGa              >  2:4920338/1‑93 (MQ=255)
                                                                             gtTTGCGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGAGtt           <  1:6554458/93‑1 (MQ=255)
                                                                                  cGGAAGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGAGTTAcccc      <  2:2875595/93‑1 (MQ=255)
                                                                                    gAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGAGTTACCCCtt    >  1:2770262/1‑93 (MQ=255)
                                                                                     aaGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGAGTTACCCCttt   <  2:4551651/93‑1 (MQ=255)
                                                                                     aaGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGAGTTACCCCttt   <  1:530072/93‑1 (MQ=255)
                                                                                      aGCGCGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGAGTTACCCCTTTc  <  1:3141026/93‑1 (MQ=255)
                                                                                         |                                                                                         
CCAGCAGAATGCCGACCACCGCGACCACGCCAGAGGTAATTTCCAGGGTCAACATGCTGCCGTGCGCCAGTTCCGTCGTTTGCGGAAGCACGCCCTGCAGCGGCGGTACAATCAGTGCGCCAACGAAGGTGGAAAGGATCAGCAGCACAATCAGCGGCAGGCTGTGAGTTACCCCTTTC  >  NC_000913/2391545‑2391723

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: