BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,563,766	A→G	V380A (GTG→GCG)	b2451 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,563,766	0	A	G	86.0%	665.7 / 93.4	257	V380A (GTG→GCG)	b2451	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (18/18); new base G (103/118); total (121/136)
Fisher's exact test for biased strand distribution p-value = 7.22e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.35e-01

Only 100 of 273 total aligned reads displayed.

CCGGCCACCACCAGCAGGGGATGCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCACAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAGCTGAATCAGCGCCTGTTGCCAGGCCCCCACC  >  NC_000913/2563676‑2563855

 cGGCCACCACCAGCAGGGGATGCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAg                                                                                        <  1:1817507/93‑1 (MQ=255)

   gCCACCACCAGCAGGGGATGCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGc                                                                                      <  2:5210821/93‑1 (MQ=255)

    ccaccaccaGCAGGGGATGCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGCTGACCGTCAGTACCGCGGCGTAACGCACAGGCa                                                                                     >  1:5140074/1‑93 (MQ=255)

    ccaccaccaGCAGGGGATGCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCACAGGCa                                                                                     >  2:5700471/1‑93 (MQ=255)

      accaccaGCAGGGGATGCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGc                                                                                   >  2:2903552/1‑93 (MQ=255)

       ccaccaGCAGGGGATGCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCg                                                                                  <  1:921299/93‑1 (MQ=255)

        caccaGCAGGGGATGCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGa                                                                                 <  2:3170190/93‑1 (MQ=255)

         accaGCAGGGGATGCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAg                                                                                <  2:1811426/93‑1 (MQ=255)

          ccaGCAGGGGATGCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAgg                                                                               <  1:5850509/93‑1 (MQ=255)

           cagcagGGGATGCGGATTCGTAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGc                                                                              >  2:360621/1‑93 (MQ=255)

           cagcagGGGATGCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGc                                                                              <  1:1031991/93‑1 (MQ=255)

           cagcagGGGATGCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGc                                                                              <  2:1129300/93‑1 (MQ=255)

            agcagGGGATGCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCg                                                                             >  1:2019960/1‑93 (MQ=255)

            agcagGGGATGCGGATTCGGAAAACGCGCGACGAAAGCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCg                                                                             <  2:3008413/93‑1 (MQ=255)

                ggggATGCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGaa                                                                         <  1:4993245/93‑1 (MQ=255)

                ggggATGCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCACAGGCAGCGAGGCGGGaa                                                                         <  1:2480714/93‑1 (MQ=255)

                 gggATGCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAg                                                                        <  2:1721223/93‑1 (MQ=255)

                 gggATGCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAg                                                                        <  2:3083009/93‑1 (MQ=255)

                  ggATGCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAgc                                                                       >  1:3513727/1‑93 (MQ=255)

                   gATGCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAgcg                                                                      <  2:5564222/93‑1 (MQ=255)

                    aTGCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAgcgc                                                                     <  2:4720550/93‑1 (MQ=255)

                      gCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCa                                                                   <  1:4561398/93‑1 (MQ=255)

                      gCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCa                                                                   >  1:3415239/1‑93 (MQ=255)

                      gCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCa                                                                   >  2:870495/1‑93 (MQ=255)

                       cGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCACAGGCAGCGAGGCGGGAAGCGCCAg                                                                  <  2:4900649/93‑1 (MQ=255)

                        ggATTCGGCAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGc                                                                 >  1:6487199/1‑93 (MQ=255)

                        ggATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCACAGGCAGCGAGGCGGGAAGCGCCAGc                                                                 <  2:746506/93‑1 (MQ=255)

                          aTTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCAc                                                               <  2:2021418/93‑1 (MQ=255)

                          aTTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCACAGGCAGCGAGGCGGGAAGCGCCAGCAc                                                               >  1:3443995/1‑93 (MQ=255)

                             cgtaaaaCTGGCGACGAAAGCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTa                                                            <  1:5019693/90‑1 (MQ=255)

                             cGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTa                                                            >  1:2576588/1‑93 (MQ=255)

                             cGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTa                                                            >  1:303258/1‑93 (MQ=255)

                             cGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTa                                                            <  1:2936562/93‑1 (MQ=255)

                               gAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTAcg                                                          >  2:3245932/1‑93 (MQ=255)

                               gAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTAcg                                                          <  2:3798644/93‑1 (MQ=255)

                                aaaaCGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGGAGCGCCAGCACGTAcgc                                                         >  1:5713722/1‑93 (MQ=255)

                                aaaaCGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTAcgc                                                         >  2:2841712/1‑93 (MQ=255)

                                   aCGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTc                                                      >  2:3431363/1‑93 (MQ=255)

                                   aCGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTc                                                      <  2:6416732/93‑1 (MQ=255)

                                   aCGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTc                                                      <  2:6191362/93‑1 (MQ=255)

                                     gcgcgACGTAATGGACCAACGCGTTGATGCCCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAg                                                    <  1:2390864/93‑1 (MQ=255)

                                       ccgacgaAATCGACCAACGCGTTGATGCCCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGtt                                                  <  2:4090311/92‑1 (MQ=255)

                                        cgacgaAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGttt                                                 >  1:481250/1‑93 (MQ=255)

                                          acgaAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTg                                               >  1:4894869/1‑93 (MQ=255)

                                            gaAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTggg                                             >  1:5091324/1‑93 (MQ=255)

                                             aaaTCGACCAGCGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGa                                            <  2:3945662/93‑1 (MQ=255)

                                             aaaTCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGa                                            <  2:757190/93‑1 (MQ=255)

                                              aaTCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGAt                                           >  2:3323322/1‑93 (MQ=255)

                                              aaTCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGAt                                           <  1:55766/93‑1 (MQ=255)

                                               aTCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATc                                          >  1:1899437/1‑93 (MQ=255)

                                                tCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCa                                         <  1:3335169/93‑1 (MQ=255)

                                                 cGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCaa                                        <  1:5449875/93‑1 (MQ=255)

                                                    ccAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGAt                                     >  1:133441/1‑93 (MQ=255)

                                                     cAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATc                                    <  2:4491924/93‑1 (MQ=255)

                                                     cAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATc                                    <  1:3765081/93‑1 (MQ=255)

                                                      aaCGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATcc                                   <  1:2295556/93‑1 (MQ=255)

                                                      aaCGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATcc                                   <  1:4626740/93‑1 (MQ=255)

                                                      aaCGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATcc                                   >  1:2867147/1‑93 (MQ=255)

                                                      aaCGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATcc                                   >  1:40951/1‑93 (MQ=255)

                                                       aCGCGTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCa                                  <  2:715551/93‑1 (MQ=255)

                                                        cgcgTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAg                                 <  2:1515687/93‑1 (MQ=255)

                                                         gcgTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAGc                                <  2:6285581/93‑1 (MQ=255)

                                                          cgTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAGCt                               <  1:684078/93‑1 (MQ=255)

                                                           gTTGATGACCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAGCTg                              >  2:4962836/1‑93 (MQ=255)

                                                           gTTGATGACCGCCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGGTTTGGGATCAAGATCCAGCTg                              >  1:6012085/1‑93 (MQ=255)

                                                              gatgaCCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAGCTGAAt                           <  2:4043705/93‑1 (MQ=255)

                                                               atgaCCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAGCTGAATc                          >  2:2590577/1‑93 (MQ=255)

                                                               atgaCCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAGCTGAATc                          <  2:4751523/93‑1 (MQ=255)

                                                               atgaCCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAGCTGAATc                          >  1:1445471/1‑93 (MQ=255)

                                                                tgaCCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAGCTGAATCa                         <  1:1633047/93‑1 (MQ=255)

                                                                tgaCCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAGCTGAATCa                         >  1:6165861/1‑93 (MQ=255)

                                                                 gaCCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAGCTGAATCAg                        <  2:160421/93‑1 (MQ=255)

                                                                 gaCCGTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAGCTGAATCAg                        <  2:5719807/93‑1 (MQ=255)

                                                                 gaCCGTCAGTACCGCGGCGTAACGCACAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAGCTGAATCAg                        <  2:6533690/93‑1 (MQ=255)

                                                                     gTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAGCTGAATCAGCGcc                    <  2:19663/93‑1 (MQ=255)

                                                                     gTCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAGCTGAATCAGCGcc                    <  1:2803117/93‑1 (MQ=255)

                                                                     ctCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCGCGTACGCGTCAGTTTTGGGATCAAGATCCAGCTGAATCAGCGcc                    <  1:6263226/92‑1 (MQ=255)

                                                                      tCAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAGCTGAATCAGCGCCt                   >  1:3139104/1‑93 (MQ=255)

                                                                       cAGTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAGCTGAATCAGCGCCTg                  <  2:5423095/93‑1 (MQ=255)

                                                                         gTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAGCTGAATCAGCGCCTGtt                >  1:2200545/1‑93 (MQ=255)

                                                                         gTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAGCTGAATCAGCGCCTGtt                >  1:4348560/1‑93 (MQ=255)

                                                                         gTACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAACATCCAGCTGAATCAGCGCCTGtt                >  2:5853501/1‑93 (MQ=255)

                                                                          tACCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAGCTGAATCAGCGCCTGTTg               >  1:6560616/1‑93 (MQ=255)

                                                                           aCCGCGGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAGCTGAATCAGCGCCTGTTGc              <  2:2294776/93‑1 (MQ=255)

                                                                            ccGCGGCGTAACGCACAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAGCTGAATCAGCGCCTGTTGcc             >  2:2765111/1‑93 (MQ=255)

                                                                             cgcgGCGTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAGCTGAATCAGCGCCTGTTGCCa            <  1:5341586/93‑1 (MQ=255)

                                                                             cgcgGCGTAACGCACAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAGCTGAATCAGCGCCTGTTGCCa            <  1:1492693/93‑1 (MQ=255)

                                                                                 gcgTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAGCTGAATCAGCGCCTGTTGCCAGGcc        >  1:3630700/1‑93 (MQ=255)

                                                                                  cgTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAGCTGAATCAGCGCCTGTTGCCAGGccc       <  1:2706718/93‑1 (MQ=255)

                                                                                   gTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAGCTGAATCAGCGCCTGTTGCCAGGcccc      <  2:5363483/93‑1 (MQ=255)

                                                                                   gTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAGCTGAATCAGCGCCTGTTGCCAGGcccc      >  2:3820972/1‑93 (MQ=255)

                                                                                   gTAACGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAGCTGAATCAGCGCCTGTTGCCAGGcccc      >  2:252355/1‑93 (MQ=255)

                                                                                    tAACGCACAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAGCTGAATCAGCGCCTGTTGCCAGGccccc     >  1:5418944/1‑93 (MQ=255)

                                                                                      aCGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAGCTGAATCAGCGCCTGTTGCCAGGCCCccac   <  2:1364334/93‑1 (MQ=255)

                                                                                      aCGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAGCTGAATCAGCGCCTGTTGCCAGGCCCccac   <  2:5919442/93‑1 (MQ=255)

                                                                                      aCGCGCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAGCTGAATCAGCGCCTGTTGCCAGGCCCccac   <  1:3981204/93‑1 (MQ=255)

                                                                                       cgcgCAGGCAGCGGGGCGGGAAGCGCCAGCACGTACACGTCAGTTTAGGGATCAAGATCCAGCTGAAACAGCGCCTGTTGCCAGGCCCccacc  <  1:6651397/93‑1 (MQ=255)

                                                                                       cgcgCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAGCTGAATCAGCGCCTGTTGCCAGGCCCccacc  <  1:6323855/93‑1 (MQ=255)

                                                                                       cgcgCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAGCTGAATCAGCGCCTGTTGCCAGGCCCccacc  <  1:5635219/93‑1 (MQ=255)

                                                                                       cgcgCAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAGCTGAATCAGCGCCTGTTGCCAGGCCCccacc  <  1:1122869/93‑1 (MQ=255)

CCGGCCACCACCAGCAGGGGATGCGGATTCGGAAAACGCGCGACGAAATCGACCAACGCGTTGATGACCGTCAGTACCGCGGCGTAACGCACAGGCAGCGAGGCGGGAAGCGCCAGCACGTACGCGTCAGTTTTGGGATCAAGATCCAGCTGAATCAGCGCCTGTTGCCAGGCCCCCACC  >  NC_000913/2563676‑2563855

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`