Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 274,462 T→C intergenic (‑121/‑87) trs51 ← / → ykfD IS5 transposase/putative amino acid/amine transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913274,4620TC88.3% 674.3 / 70.4 239intergenic (‑121/‑87)trs51/ykfDIS5 transposase/putative amino acid/amine transport protein
Reads supporting (aligned to +/- strand):  ref base T (14/14);  new base C (104/107);  total (118/121)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.31e-01

Only 100 of 245 total aligned reads displayed.

TCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAGGTTATATG  >  NC_000913/274371‑274551
                                                                                           |                                                                                         
tCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTg                                                                                          <  2:2536045/93‑1 (MQ=255)
   ggAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAg                                                                                       >  2:6005773/1‑93 (MQ=255)
    gAGTCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAgg                                                                                      <  1:2665303/93‑1 (MQ=255)
      ggCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGt                                                                                    >  2:118869/1‑93 (MQ=255)
       gCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGtt                                                                                   <  2:3046886/93‑1 (MQ=255)
            aTGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACtt                                                                              <  1:2914241/93‑1 (MQ=255)
               aGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGc                                                                           >  2:3276814/1‑93 (MQ=255)
                gCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCa                                                                          <  2:5524414/93‑1 (MQ=255)
                gCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCa                                                                          >  2:3722638/1‑93 (MQ=255)
                 cTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCAt                                                                         >  1:5886276/1‑93 (MQ=255)
                   ggcggcCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGGCTTTGCATTc                                                                       >  1:3650522/1‑93 (MQ=255)
                   ggcggcCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTc                                                                       <  2:1895154/93‑1 (MQ=255)
                   ggcggcCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTc                                                                       <  1:3428507/93‑1 (MQ=255)
                    gcggcCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCt                                                                      <  1:1019017/93‑1 (MQ=255)
                     cggcCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTg                                                                     >  2:2734360/1‑93 (MQ=255)
                      ggcCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGt                                                                    <  1:82400/93‑1 (MQ=255)
                       gcCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGtt                                                                   >  1:3440044/1‑93 (MQ=255)
                        cccTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTa                                                                  >  1:2555614/1‑93 (MQ=255)
                         ccTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTaa                                                                 >  1:4252143/1‑93 (MQ=255)
                           tttttGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACa                                                               >  1:6192495/1‑93 (MQ=255)
                             tttGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACaaa                                                             >  1:4124971/1‑93 (MQ=255)
                              ttGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAAc                                                            <  2:104005/93‑1 (MQ=255)
                               tGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAAcg                                                           >  2:4321847/1‑93 (MQ=255)
                                gTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAAcgc                                                          <  2:6540262/93‑1 (MQ=255)
                                gTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAAcgc                                                          >  1:3212093/1‑93 (MQ=255)
                                 tATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAAcgcg                                                         >  2:830200/1‑93 (MQ=255)
                                  aTCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCgg                                                        >  1:5213313/1‑93 (MQ=255)
                                  aTCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCgg                                                        <  1:5805102/93‑1 (MQ=255)
                                   tCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGt                                                       <  2:4226011/93‑1 (MQ=255)
                                   tCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGt                                                       <  1:1747248/93‑1 (MQ=255)
                                    cTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGta                                                      <  2:1974555/93‑1 (MQ=255)
                                    cTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGta                                                      <  1:250174/93‑1 (MQ=255)
                                    cTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGta                                                      <  1:3379278/93‑1 (MQ=255)
                                     tGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGtat                                                     >  2:4436503/1‑93 (MQ=255)
                                        ttattaATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGATGACTGTGCATTCTGTTAACAAACGCGGTATAAc                                                  >  2:3330715/1‑93 (MQ=255)
                                         tattaATCCCCGCCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACa                                                 <  1:5400972/93‑1 (MQ=255)
                                         tattaATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACa                                                 <  2:2390995/93‑1 (MQ=255)
                                          attaATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACaa                                                >  1:5425902/1‑93 (MQ=255)
                                           ttaATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACaaa                                               <  1:5565108/93‑1 (MQ=255)
                                           ttaATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACaaa                                               <  2:2621839/93‑1 (MQ=255)
                                            taATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAAc                                              >  2:2969221/1‑93 (MQ=255)
                                             aaTCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAAcc                                             >  2:5195218/1‑93 (MQ=255)
                                             aaTCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAAcc                                             <  1:5593544/93‑1 (MQ=255)
                                             aaTCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAAcc                                             <  1:1380415/93‑1 (MQ=255)
                                             aaTCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAAcc                                             <  2:3136367/93‑1 (MQ=255)
                                              aTCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACct                                            >  1:4059015/1‑93 (MQ=255)
                                              aTCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACct                                            >  2:1544410/1‑93 (MQ=255)
                                               tCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACctt                                           >  2:159932/1‑93 (MQ=255)
                                                ccccACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACcttc                                          <  2:5912856/93‑1 (MQ=255)
                                                ccccACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACcttc                                          >  2:1812051/1‑93 (MQ=255)
                                                ccccACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACcttc                                          <  2:1460193/93‑1 (MQ=255)
                                                ccccACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACcttc                                          <  2:6281588/93‑1 (MQ=255)
                                                 cccACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACcttct                                         >  2:5119748/1‑93 (MQ=255)
                                                 cccACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACcttct                                         <  1:377065/93‑1 (MQ=255)
                                                  ccACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACcttctt                                        <  2:5717656/93‑1 (MQ=255)
                                                   cACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCttt                                       >  2:155850/1‑93 (MQ=255)
                                                   cACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCttt                                       >  1:4022579/1‑93 (MQ=255)
                                                    aCCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTg                                      >  2:69307/1‑93 (MQ=255)
                                                    aCCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTg                                      >  1:6490653/1‑93 (MQ=255)
                                                     cccGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTgg                                     <  2:4641339/93‑1 (MQ=255)
                                                     cccGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTgg                                     >  2:3433793/1‑93 (MQ=255)
                                                     cccGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTgg                                     <  2:5759364/93‑1 (MQ=255)
                                                     cccGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTgg                                     >  1:2378339/1‑93 (MQ=255)
                                                        gCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATg                                  >  1:5092966/1‑93 (MQ=255)
                                                         cTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGt                                 >  1:483067/1‑93 (MQ=255)
                                                         cTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGt                                 >  1:6253393/1‑93 (MQ=255)
                                                          tATTAAGCGCCCGGCGCGGGCATGTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGtt                                <  1:2238151/93‑1 (MQ=255)
                                                          tATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGtt                                >  2:3102292/1‑93 (MQ=255)
                                                          tATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGtt                                <  2:6136728/93‑1 (MQ=255)
                                                          tATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGtt                                >  2:2076316/1‑93 (MQ=255)
                                                            ttAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTa                              <  2:3609374/93‑1 (MQ=255)
                                                             tAAGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAg                             <  1:5745994/93‑1 (MQ=255)
                                                               aGCGCCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGAt                           >  1:6598773/1‑93 (MQ=255)
                                                                gcgcCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATg                          >  1:3279200/1‑93 (MQ=255)
                                                                gcgcCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAAACTTCTTTGGATGTTTAGATg                          >  2:4967410/1‑93 (MQ=255)
                                                                 cgcCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGt                         >  1:3592078/1‑93 (MQ=255)
                                                                 cgcCCGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGt                         <  1:4462740/93‑1 (MQ=255)
                                                                   cccGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTcc                       <  1:6102914/93‑1 (MQ=255)
                                                                   cccGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTcc                       >  2:3682423/1‑93 (MQ=255)
                                                                    ccGGCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCa                      <  2:3770836/93‑1 (MQ=255)
                                                                     cGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCAt                     <  1:4300280/93‑1 (MQ=255)
                                                                      ggCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATa                    >  1:2770714/1‑93 (MQ=255)
                                                                      ggCGCGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAATCTTCTTTGGATGTTTAGATGTCCATa                    <  2:3959157/93‑1 (MQ=255)
                                                                       gcgcGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATAc                   <  2:1145365/93‑1 (MQ=255)
                                                                       gcgcGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATAc                   >  1:5168467/1‑93 (MQ=255)
                                                                       gcgcGGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATAc                   <  1:1719266/93‑1 (MQ=255)
                                                                          cgGGCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGtt                <  2:1348948/93‑1 (MQ=255)
                                                                           gggCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGttt               <  2:2136519/93‑1 (MQ=255)
                                                                            ggCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTa              <  1:5980787/93‑1 (MQ=255)
                                                                            ggCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTa              <  1:3387037/93‑1 (MQ=255)
                                                                             gCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAg             <  1:959669/93‑1 (MQ=255)
                                                                             gCATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAg             >  1:1252675/1‑93 (MQ=255)
                                                                              cATCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGa            <  2:4848451/93‑1 (MQ=255)
                                                                               aTCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGaa           >  2:1651387/1‑93 (MQ=255)
                                                                                tCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAg          <  2:9384/93‑1 (MQ=255)
                                                                                tCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAg          >  2:2942876/1‑93 (MQ=255)
                                                                                tCTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAg          <  1:4625803/93‑1 (MQ=255)
                                                                                 cTGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAgg         <  1:1165270/93‑1 (MQ=255)
                                                                                  tGCGTCTGGCGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAGGt        <  1:1493814/93‑1 (MQ=255)
                                                                                      tCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAGGTtata    <  2:4579480/93‑1 (MQ=255)
                                                                                           |                                                                                         
TCCGGAGGCGTTATGAGCTGGCGGCCCTTTTTGTATCTGATTATTAATCCCCACCCGCTATTAAGCGCCCGGCGCGGGCATCTGCGTCTGGTGCAGGGTTGACTTTGCATTCTGTTAACAAACGCGGTATAACAAACCTTCTTTGGATGTTTAGATGTCCATACGTTTAGAAGGTTATATG  >  NC_000913/274371‑274551

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: