BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,908,853	T→C	G87G (GGA→GGG)	chpA ←	ChpA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,908,853	0	T	C	100.0%	1035.9 / NA	282	G87G (GGA→GGG)	chpA	ChpA
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (139/143); total (139/143)

Only 100 of 295 total aligned reads displayed.

AGTGAGTTAGTAACACTACCCAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCTCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAAACAACTTCGAACGGATA  >  NC_000913/2908763‑2908942

  tGAGTTAGTAACACTACCCAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGcccctc                                                                                       >  1:4869112/1‑93 (MQ=255)

   gAGTTAGTAACACTACCCAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCctct                                                                                      >  1:1093336/1‑93 (MQ=255)

   gAGTTAGTAACACTACCCAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCctct                                                                                      <  2:3928575/93‑1 (MQ=255)

   gAGTTAGTAACACTACCCAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCctct                                                                                      <  2:2502495/93‑1 (MQ=255)

   gAGTTAGTAACACTACCCAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCctct                                                                                      <  2:2190089/93‑1 (MQ=255)

    aGTTAGTAACACTACCCAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCtt                                                                                     >  1:2907554/1‑93 (MQ=255)

     gTTAGTAACACTACCCAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTg                                                                                    >  1:5225462/1‑93 (MQ=255)

      ttAGTAACACTACCCAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGc                                                                                   <  2:6528802/93‑1 (MQ=255)

      ttAGTAACACTACCCAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGc                                                                                   >  2:2613663/1‑93 (MQ=255)

       tAGTAACACTACCCAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGcc                                                                                  >  2:956233/1‑93 (MQ=255)

           aaCACTACCCAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGcc                                                                              >  2:3611747/1‑93 (MQ=255)

             cacTACCCAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAg                                                                            >  1:6044847/1‑93 (MQ=255)

             cacTACCCAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAg                                                                            <  2:4372717/93‑1 (MQ=255)

             cacTACCCAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAg                                                                            <  2:696937/93‑1 (MQ=255)

              acTACCCAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAgg                                                                           <  2:347698/93‑1 (MQ=255)

               cTACCCAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGc                                                                          >  1:2030455/1‑93 (MQ=255)

               cTACCCAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGc                                                                          >  1:3700205/1‑93 (MQ=255)

                tACCCAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCg                                                                         <  1:3736635/93‑1 (MQ=255)

                 aCCCAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGa                                                                        <  1:5963686/93‑1 (MQ=255)

                  cccAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGAt                                                                       >  1:5600996/1‑93 (MQ=255)

                  cccAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGAt                                                                       <  2:1532010/93‑1 (MQ=255)

                   ccAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATa                                                                      >  1:5367283/1‑93 (MQ=255)

                    cAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATAc                                                                     >  1:1921601/1‑93 (MQ=255)

                       tCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACttt                                                                  >  1:3079809/1‑93 (MQ=255)

                        cAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACtttt                                                                 <  1:3531637/93‑1 (MQ=255)

                        cAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACtttt                                                                 <  1:719988/93‑1 (MQ=255)

                         aGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACttttt                                                                <  2:3110286/93‑1 (MQ=255)

                         aGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACttttt                                                                <  2:5861250/93‑1 (MQ=255)

                          gTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTa                                                               >  1:4689868/1‑93 (MQ=255)

                          gTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTa                                                               >  2:45451/1‑93 (MQ=255)

                          gTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTa                                                               >  1:1023968/1‑93 (MQ=255)

                           tACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTAc                                                              <  2:780486/93‑1 (MQ=255)

                            aCGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTAcc                                                             <  2:3864262/93‑1 (MQ=255)

                             cGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCt                                                            <  1:5626408/93‑1 (MQ=255)

                              gTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTg                                                           >  2:5257510/1‑93 (MQ=255)

                              gTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTg                                                           <  2:6255835/93‑1 (MQ=255)

                              gTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTg                                                           <  1:4542653/93‑1 (MQ=255)

                               ttAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGa                                                          <  2:3261026/93‑1 (MQ=255)

                                tAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGAt                                                         <  2:421723/93‑1 (MQ=255)

                                tAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGAt                                                         <  2:5198749/93‑1 (MQ=255)

                                  aTTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCa                                                       >  2:4996904/1‑93 (MQ=255)

                                   ttttGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAg                                                      >  1:1294652/1‑93 (MQ=255)

                                     ttGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCt                                                    <  1:3243771/93‑1 (MQ=255)

                                     ttGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCt                                                    >  2:2829785/1‑93 (MQ=255)

                                     ttGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCt                                                    <  1:3907636/93‑1 (MQ=255)

                                       ggCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTaa                                                  >  1:4107046/1‑93 (MQ=255)

                                        gCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAAc                                                 <  1:5858062/93‑1 (MQ=255)

                                         cTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACg                                                >  1:2557563/1‑93 (MQ=255)

                                          tttAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGc                                               >  1:4195630/1‑93 (MQ=255)

                                          tttAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGc                                               <  2:286536/93‑1 (MQ=255)

                                            tAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTa                                             >  2:3192191/1‑93 (MQ=255)

                                            tAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTa                                             >  2:2121708/1‑93 (MQ=255)

                                             aaTGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTAc                                            <  1:6446008/93‑1 (MQ=255)

                                               tGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGc                                          >  2:3498164/1‑93 (MQ=255)

                                                  gTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCAt                                       <  1:2462725/93‑1 (MQ=255)

                                                   ttGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATc                                      <  1:3661945/93‑1 (MQ=255)

                                                     ttAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCATGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCAc                                    <  2:1723404/92‑1 (MQ=255)

                                                     gTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCAc                                    >  2:2994109/1‑93 (MQ=255)

                                                     gTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCAc                                    <  2:6391323/93‑1 (MQ=255)

                                                     gTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCAc                                    >  1:2590520/1‑93 (MQ=255)

                                                      tAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACg                                   >  1:575408/1‑93 (MQ=255)

                                                       aaTTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGt                                  <  1:1381478/93‑1 (MQ=255)

                                                        aTTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGtt                                 >  2:5971240/1‑93 (MQ=255)

                                                        aTTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGtt                                 <  2:1151283/93‑1 (MQ=255)

                                                         ttCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTc                                >  2:2658744/1‑93 (MQ=255)

                                                         ttCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTc                                >  1:803262/1‑93 (MQ=255)

                                                         ttCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTc                                <  2:2714903/93‑1 (MQ=255)

                                                          tCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTcc                               <  2:16780/93‑1 (MQ=255)

                                                          tCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTcc                               >  2:5081732/1‑93 (MQ=255)

                                                             tctGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGa                            >  2:1115063/1‑93 (MQ=255)

                                                              ctGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGAc                           <  2:1026955/93‑1 (MQ=255)

                                                               tGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGAcc                          >  2:897820/1‑93 (MQ=255)

                                                               tGGGGCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGAcc                          <  2:2003179/93‑1 (MQ=255)

                                                                ggggCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCg                         <  1:5466260/93‑1 (MQ=255)

                                                                ggggCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCg                         <  2:4103332/93‑1 (MQ=255)

                                                                   gCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGAt                      >  2:1927103/1‑93 (MQ=255)

                                                                   gCAACTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGAt                      <  2:6079318/93‑1 (MQ=255)

                                                                     aaCTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATaa                    >  2:4639360/1‑93 (MQ=255)

                                                                      aCTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATaaa                   <  2:1353482/93‑1 (MQ=255)

                                                                       cTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATaaaa                  <  2:12234/93‑1 (MQ=255)

                                                                       cTGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATaaaa                  <  2:3845492/93‑1 (MQ=255)

                                                                        tGTTCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAaac                 <  1:5008869/93‑1 (MQ=255)

                                                                          ttCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAaacaa               >  2:3741454/1‑93 (MQ=255)

                                                                           tCCTTTCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAaacaac              >  1:2776946/1‑93 (MQ=255)

                                                                              tttCTTCGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAAACAACTTc           <  2:4063725/93‑1 (MQ=255)

                                                                               ttcttcGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAAACAACTTCg          <  1:2285116/93‑1 (MQ=255)

                                                                                tcttcGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAAACAACTTCGa         <  1:3207042/93‑1 (MQ=255)

                                                                                 cttcGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAAACAACTTCGaa        >  1:6142488/1‑93 (MQ=255)

                                                                                 cttcGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAAACAACTTCGaa        <  1:2108497/93‑1 (MQ=255)

                                                                                 cttcGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAAACAACTTCGaa        >  1:953231/1‑93 (MQ=255)

                                                                                  ttcGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAAACAACTTCGAAc       <  2:5666268/93‑1 (MQ=255)

                                                                                  ttcGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAAACAACTTCGAAc       >  1:6227887/1‑93 (MQ=255)

                                                                                  ttcGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAAACAACTTCGAAc       <  1:6426838/93‑1 (MQ=255)

                                                                                  ttcGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAAACAACTTCGAAc       <  1:358937/93‑1 (MQ=255)

                                                                                   tcGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAAACAACTTCGAACg      <  2:6363782/93‑1 (MQ=255)

                                                                                   tcGTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAAACAACTTCGAACg      >  1:145240/1‑93 (MQ=255)

                                                                                     gTTGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAAACAACTTCGAACGGa    >  2:6215415/1‑93 (MQ=255)

                                                                                      ttGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAAACAACTTCGAACGGat   >  2:4538985/1‑93 (MQ=255)

                                                                                      ttGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAAACAACTTCGAACGGat   <  1:4386278/93‑1 (MQ=255)

                                                                                       tGCCCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAAACAACTTCGAACGGata  <  1:5106741/93‑1 (MQ=255)

AGTGAGTTAGTAACACTACCCAATCAGTACGTTAATTTTGGCTTTAATGAGTTGTAATTCCTCTGGGGCAACTGTTCCTTTCTTCGTTGCTCCTCTTGCCCGCCAGGCGATACTTTTTACCTGATCAGCTAACGCTACGCCATCACGTTCCTGACCGGATAAAACAACTTCGAACGGATA  >  NC_000913/2908763‑2908942

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`