BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,130,334	A→G	V30V (GTT→GTC)	b2983 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,130,334	0	A	G	100.0%	713.7 / NA	192	V30V (GTT→GTC)	b2983	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (90/102); total (90/102)

Only 100 of 210 total aligned reads displayed.

CGATTGCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACAACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGCCA  >  NC_000913/3130244‑3130422

cGATTGCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCacgac                                                                                        >  2:4094837/1‑93 (MQ=255)

cGATTGCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCacgac                                                                                        <  1:467420/93‑1 (MQ=255)

cGATTGCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCacgac                                                                                        <  2:5532152/93‑1 (MQ=255)

 gATTGCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTA‑CCGGCACACGAGAGCGCCAACAGACACCGCAAAGCGCTCacaaca                                                                                       >  1:216445/1‑93 (MQ=255)

  aTTGCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTA‑CCCGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACAt                                                                                      >  2:2140947/1‑93 (MQ=255)

  aTTGCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTA‑CCCGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACAt                                                                                      >  2:636846/1‑93 (MQ=255)

     gCACAATCCCCAGTACGCAAAACGTGGCGGGCGTCATCCCTTTA‑CCGGCACACGAGAGCACCAACAGACCCAGCAAGGCGCTCACGACATTAc                                                                                   <  2:4890343/93‑1 (MQ=255)

     gCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTA‑CCGGCACACGAGAGCGCCAACAGACCCACCAAGGCGCTCACGACATTAc                                                                                   >  1:5452757/1‑93 (MQ=255)

      cacaATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACt                                                                                  <  1:1029381/93‑1 (MQ=255)

       acaATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTA‑CCCGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTg                                                                                 >  1:2769870/1‑93 (MQ=255)

        caATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTgg                                                                                <  2:2075710/93‑1 (MQ=255)

         aaTCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGa                                                                               <  1:1004663/93‑1 (MQ=255)

          aTCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTA‑CCGGCACACGAGAGCGCCCACAGACCCAGCAAGGCGCTCACGACATTACTCGAg                                                                              >  2:2627056/1‑93 (MQ=255)

          aTCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAg                                                                              <  1:753768/93‑1 (MQ=255)

          aTCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTA‑CCGGCACACGAGAGCGCCAACAGAACCAGCAAGGCGCTCACGACATTACTGGAg                                                                              >  1:1175556/1‑93 (MQ=255)

           tCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGc                                                                             <  2:5339223/93‑1 (MQ=255)

           tCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGAGCTCACGACATTACTGGAGc                                                                             <  1:6399327/93‑1 (MQ=255)

            cACCAGTACGCAAAACATGGCGGGCGTCATCCCTTTA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGcc                                                                            <  2:3731516/93‑1 (MQ=255)

             aCCAGTACGCAAAACATGGCGGGCGTCATCCCTTTA‑CCGGCACACGAGAGCGCCAACAGCCCCAGCAAGGCGCTCACGACATTACTGGAGCCt                                                                           <  2:4016390/93‑1 (MQ=255)

              ccAGTACGCCAAACATGGCGGGCGTCATCCCTTTA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTa                                                                          <  1:2982709/93‑1 (MQ=255)

              ccAGTACGCCAAACATGGCGGGCGGCATCCCTTTA‑CCGGCACACGCGAGCGGCAAAAGACCCCACAAAGAGCTCCCGACATTACTGGGGccga                                                                          >  2:4224391/1‑91 (MQ=255)

                 gTACGCCAAACATGGCGGGCGTCATCCCTTTA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAAcc                                                                       >  1:3002506/1‑93 (MQ=255)

                   cccccAAACGGGGGGCGCGTCCCCCTTTTC‑CCGCCACCGGAGCGCCCCAAAGGCCCCAGAAAGGCCCCCACGACATTACTGGAGCCTAACCAg                                                                     <  2:114003/90‑1 (MQ=255)

                   aCGCCAAACATGGCGGGCGTCATCCCTTTA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAg                                                                     <  2:3108201/93‑1 (MQ=255)

                   aCGCCAAACATGGCGGGCGTCATCCCTTTA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAg                                                                     >  1:5416962/1‑93 (MQ=255)

                    cGCCAAACATGGCGGGCGTCATCCCTTTA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAgg                                                                    <  2:2872975/93‑1 (MQ=255)

                      ccAAACATGGCGGGCGTCATCCCTTTA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGgcg                                                                  >  1:5618909/1‑93 (MQ=255)

                       cAAACATGGCGGGCGTCATCCCTTTA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGgcgc                                                                 >  2:6345489/1‑93 (MQ=255)

                       cAAACATGGCGGGCGTCATCCCTTTA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGgcgc                                                                 >  2:483831/1‑93 (MQ=255)

                        aaaCATGGCGGGCGTCATCCCTTTA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCt                                                                <  1:4387183/93‑1 (MQ=255)

                        aaaCATGGCGGGCGTCATCCCTTTA‑CCGGCACACGAGAGCGCCAAAAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCt                                                                >  2:4308448/1‑93 (MQ=255)

                         aaCATGGCGGGCGTCATCCCTTTA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTa                                                               <  1:3046349/93‑1 (MQ=255)

                            aTGGCGGGCGTCATCCCTTTA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTg                                                            <  1:953051/93‑1 (MQ=255)

                             tGGCGGGCGTCATCCCTTTA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGc                                                           <  1:3244502/93‑1 (MQ=255)

                             gggcgggcgTCACCCCTTTC‑CCGCCACACGAGAGCCCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGc                                                           <  1:1463185/92‑1 (MQ=255)

                               gcgggcgTCATCCCTTTA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGa                                                         <  1:2810388/93‑1 (MQ=255)

                               gcgggcgCCACCCCTTTC‑CCGGCACACGAGAGCGCAAACAGCCCCAGAAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGa                                                         <  1:2573433/93‑1 (MQ=255)

                                   gcgTCATCCCTTTA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGaataa                                                     >  2:4857181/1‑93 (MQ=255)

                                   gcgTCATCCCTTTA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGaataa                                                     >  1:6414453/1‑93 (MQ=255)

                                     gTCATCCCTTTA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATg                                                   <  2:606329/93‑1 (MQ=255)

                                     gTCATCCCTTTA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATg                                                   <  1:638368/93‑1 (MQ=255)

                                     cctctCCCTTTCCCCGGCACAGGAGAGCCCCAAAAGCCCCGGAAGGCCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGaataat                                                    <  1:2484962/89‑1 (MQ=255)

                                      tCATCCCTTTA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATgg                                                  >  2:766824/1‑93 (MQ=255)

                                      tCATCCCTTTA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATgg                                                  <  2:2100468/93‑1 (MQ=255)

                                      tCATCCCTTTA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATgg                                                  >  2:5192199/1‑93 (MQ=255)

                                       cATCCCTTTC‑CCGCCACACGAGAGCGCCAACAGCCCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGt                                                 <  2:234061/93‑1 (MQ=255)

                                        aTCCCTTTA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTg                                                >  1:6364356/1‑93 (MQ=255)

                                        aTCCCTTTA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTg                                                >  1:5187497/1‑93 (MQ=255)

                                         tCCCTTTA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGc                                               >  2:3542572/1‑93 (MQ=255)

                                         ccccTTTA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGc                                               <  2:2817506/92‑1 (MQ=255)

                                          cccTTTC‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCg                                              <  1:4181825/93‑1 (MQ=255)

                                             tttA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGaaa                                           >  1:1539640/1‑93 (MQ=255)

                                              ttA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAGGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAAc                                          <  2:4057910/93‑1 (MQ=255)

                                              ttA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAAc                                          <  2:897061/93‑1 (MQ=255)

                                               tA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAAcg                                         <  2:3222868/93‑1 (MQ=255)

                                                  cggccacaCGAGAGCGCAAAAAGACCCAGCAGGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAAcgcg                                       <  2:5923205/89‑1 (MQ=255)

                                                       acacGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATc                                  <  1:1656075/93‑1 (MQ=255)

                                                       acacGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATc                                  >  1:3996591/1‑93 (MQ=255)

                                                       acacGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATc                                  >  1:2002917/1‑93 (MQ=255)

                                                        cacGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCt                                 <  1:4431549/93‑1 (MQ=255)

                                                         acGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTg                                >  1:6189584/1‑93 (MQ=255)

                                                          cGAGAGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGc                               >  2:6623218/1‑93 (MQ=255)

                                                           gagaGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCa                              >  1:1772413/1‑93 (MQ=255)

                                                           gagaGCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCa                              >  2:2227294/1‑93 (MQ=255)

                                                            agagCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCaa                             <  2:643669/93‑1 (MQ=255)

                                                            agagCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCaa                             >  2:4169644/1‑93 (MQ=255)

                                                             gagCGCCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCaaa                            <  2:6244026/93‑1 (MQ=255)

                                                                cgcCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCa                         <  1:6607143/93‑1 (MQ=255)

                                                                 gcCAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCaa                        <  2:2676454/93‑1 (MQ=255)

                                                                  ccAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAAt                       >  1:837889/1‑93 (MQ=255)

                                                                  ccAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAAt                       <  2:6562299/93‑1 (MQ=255)

                                                                  ccAACAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAAt                       >  1:5595840/1‑93 (MQ=255)

                                                                   cAACAGACCGAGAAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATg                      <  1:3637054/93‑1 (MQ=255)

                                                                    aaCAGCCCCAGCAGGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGt                     <  2:2488669/93‑1 (MQ=255)

                                                                    aaCAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGt                     >  2:4572749/1‑93 (MQ=255)

                                                                     aCAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGtt                    >  1:3427296/1‑93 (MQ=255)

                                                                     aCAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGtt                    <  1:6152600/93‑1 (MQ=255)

                                                                     aCAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGtt                    >  2:3347709/1‑93 (MQ=255)

                                                                     aCAGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGtt                    <  2:2968111/93‑1 (MQ=255)

                                                                       aGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACTAATGTTTg                  >  2:1821636/1‑93 (MQ=255)

                                                                       aGACCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTg                  >  2:2544690/1‑93 (MQ=255)

                                                                        aaCCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGa                 <  2:4205017/92‑1 (MQ=255)

                                                                         aCCCAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGAt                >  1:5084471/1‑93 (MQ=255)

                                                                            cAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGtt             >  2:3634778/1‑93 (MQ=255)

                                                                            cAGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGtt             >  1:1488659/1‑93 (MQ=255)

                                                                             aGCAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTa            >  2:1726737/1‑93 (MQ=255)

                                                                               cAAGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTaaa          <  1:1826709/93‑1 (MQ=255)

                                                                                aaGGCACTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTaaaa         <  2:4768890/93‑1 (MQ=255)

                                                                                 aGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAAc        >  1:3900517/1‑93 (MQ=255)

                                                                                 aGGCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAAc        >  2:4156853/1‑93 (MQ=255)

                                                                                  ggCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAAcc       >  1:677499/1‑93 (MQ=255)

                                                                                  ggCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAAcc       >  2:4264106/1‑93 (MQ=255)

                                                                                  ggCGCTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAAcc       >  2:1883635/1‑93 (MQ=255)

                                                                                   gcgcTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAAccc      <  2:1501917/93‑1 (MQ=255)

                                                                                     gcTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGc    >  1:913422/1‑93 (MQ=255)

                                                                                      cTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGcc   <  2:5044030/93‑1 (MQ=255)

                                                                                      cTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGcc   >  1:5907500/1‑93 (MQ=255)

                                                                                      cTCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGcc   <  2:1433456/93‑1 (MQ=255)

                                                                                       tCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGCCa  >  2:5140019/1‑93 (MQ=255)

                                                                                       tCACGACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGCCa  >  1:433232/1‑93 (MQ=255)

CGATTGCACAATCACCAGTACGCCAAACATGGCGGGCGTCATCCCTTTA‑CCGGCACACGAGAGCGCCAACAGACCCAGCAAGGCGCTCACAACATTACTGGAGCCTAACCAGGCGCTATTGCGAATAATGGTGCGAAACGCGCCATCTGCAAACCAATGTTTGATGTTAAAACCCGCCA  >  NC_000913/3130244‑3130422

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`