Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,138,885 T→C E139E (GAA→GAG hybD ← putative processing element for hydrogenase‑2

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,138,8850TC87.2% 752.1 / 81.0 274E139E (GAA→GAGhybDputative processing element for hydrogenase‑2
Reads supporting (aligned to +/- strand):  ref base T (18/17);  new base C (127/112);  total (145/129)
Fisher's exact test for biased strand distribution p-value = 8.58e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 277 total aligned reads displayed.

CCTGCTATCTCTTCAGTCATGAATCGCCTCCCGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGTTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGATCACGCCGACCAGGGTCAGCTTTTTCGGAAACTC  >  NC_000913/3138795‑3138977
                                                                                          |                                                                                            
ccTGCTATCTCTTCAGTCATGAATCGCCTCCCGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTc                                                                                            >  1:741098/1‑93 (MQ=255)
 cTGCTATCTCTTCAGTCATGAATCGCCTCCCGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCa                                                                                           <  2:1343116/93‑1 (MQ=255)
 cTGCTATCTCTTCAGTCATGAATCGCCTCCCGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCa                                                                                           <  1:3463180/93‑1 (MQ=255)
 cTGCTATCTCTTCAGTCATGAATCGCCTCCCGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCa                                                                                           >  2:5259827/1‑93 (MQ=255)
  tGCTATCTCTTCAGTCATGAATCGCCTCCCGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGTTCaa                                                                                          <  2:632669/93‑1 (MQ=255)
  tGCTATCTCTTCAGTCATGAATCGCCTCCCGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCaa                                                                                          >  2:3824413/1‑93 (MQ=255)
  tGCTATCTCTTCAGTCATGAATCGCCTCCCGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCaa                                                                                          <  1:1901785/93‑1 (MQ=255)
   gCTATCTCTTCAGTCATGAATCGCCTCCCGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAAt                                                                                         <  2:4131984/93‑1 (MQ=255)
   gCTATCTCTTCAGTCATGAATCGCCTCCCGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAAt                                                                                         >  2:4643879/1‑93 (MQ=255)
    cTATCTCTTCAGTCATGAATCGCCTCCCGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATc                                                                                        <  1:1000801/93‑1 (MQ=255)
     tATCTCTTCAGTCATGAATCGCCTCCCGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCa                                                                                       <  1:431424/93‑1 (MQ=255)
      aTCTCTTCAGTCATGAATCGCCTCCCGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCAt                                                                                      <  2:1049136/93‑1 (MQ=255)
      aTCTCTTCAGTCATGAATCGCCTCCCGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCAt                                                                                      <  1:1272656/93‑1 (MQ=255)
       tctcTTCAGTCATGAATCGCCTCCCGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCAtt                                                                                     >  1:748635/1‑93 (MQ=255)
        ctctTCAGTCATGAATCGCCTCCCGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTg                                                                                    >  2:6428415/1‑93 (MQ=255)
          ctTCAGTCATGAATCGCCTCCCGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCt                                                                                  <  2:210057/93‑1 (MQ=255)
            tCAGTCATGAATCGCCTCCCGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTc                                                                                >  1:1331380/1‑93 (MQ=255)
             cAGTCATGAATCGCCTCCCGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCa                                                                               >  2:5744312/1‑93 (MQ=255)
              aGTCATGAATCGCCTCCCGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCaa                                                                              >  1:3348828/1‑93 (MQ=255)
               gTCATGAATCGCCTCCCGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGTTCAATCATTGCTTCAAc                                                                             >  2:2508901/1‑93 (MQ=255)
                tCATGAATCGCCTCCCGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAAcc                                                                            <  2:3362279/93‑1 (MQ=255)
                 cATGAATCGCCTCCCGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCg                                                                           >  2:1680597/1‑93 (MQ=255)
                 cATGAATCGCCTCCCGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCg                                                                           <  2:6107605/93‑1 (MQ=255)
                  aTGAATCGCCTCCCGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGt                                                                          >  2:3971670/1‑93 (MQ=255)
                   tGAATCGCCTCCCGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTc                                                                         <  2:586719/93‑1 (MQ=255)
                    gAATCGCCTCCCGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCACAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCGACCGTCg                                                                        >  2:3186322/1‑93 (MQ=255)
                      aTCGCCTCCCGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGc                                                                      >  2:461636/1‑93 (MQ=255)
                       tCGCCTCCCGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCg                                                                     >  1:5608845/1‑93 (MQ=255)
                        cGCCTCCCGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGt                                                                    <  1:5783619/93‑1 (MQ=255)
                         gCCTCCCGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGtt                                                                   <  1:3099412/93‑1 (MQ=255)
                         gCCTCCCGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGtt                                                                   >  1:4653488/1‑93 (MQ=255)
                          ccTCCCGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTa                                                                  <  1:4824617/93‑1 (MQ=255)
                           cTCCCGTGGGATGGCTTCCCCGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTaa                                                                 >  1:6496576/1‑93 (MQ=255)
                           cTCCCGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTaa                                                                 >  1:1438452/1‑93 (MQ=255)
                            tCCCGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAg                                                                <  2:374923/93‑1 (MQ=255)
                             cccGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGc                                                               <  2:3517407/93‑1 (MQ=255)
                              ccGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGcc                                                              <  2:848901/93‑1 (MQ=255)
                                gTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGa                                                            >  1:5089175/1‑93 (MQ=255)
                                  gggATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGAtg                                                          >  2:6130913/1‑93 (MQ=255)
                                   ggATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGAtgt                                                         <  2:3464013/93‑1 (MQ=255)
                                   ggATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGAtgt                                                         >  1:6468883/1‑93 (MQ=255)
                                    gATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGAtgtg                                                        >  1:1570810/1‑93 (MQ=255)
                                     aTGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGAtgtgt                                                       <  1:4164609/93‑1 (MQ=255)
                                      tGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGAtgtgtg                                                      >  1:5569101/1‑93 (MQ=255)
                                       ggCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGTTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTgg                                                     >  2:314540/1‑93 (MQ=255)
                                         cTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGTTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCt                                                   >  2:4967586/1‑93 (MQ=255)
                                         cTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCt                                                   >  1:1709466/1‑93 (MQ=255)
                                         cTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCt                                                   <  2:2232538/93‑1 (MQ=255)
                                          ttCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGTTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTc                                                  <  1:6628574/93‑1 (MQ=255)
                                           tCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTcc                                                 <  2:1494662/93‑1 (MQ=255)
                                           tCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTcc                                                 <  1:1022780/93‑1 (MQ=255)
                                              aCGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGc                                              <  2:302943/93‑1 (MQ=255)
                                                gCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGa                                            <  1:1092847/93‑1 (MQ=255)
                                                gCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGa                                            <  1:4521229/93‑1 (MQ=255)
                                                 ccAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGAt                                           <  2:5918628/93‑1 (MQ=255)
                                                  cAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGAtt                                          >  2:657253/1‑93 (MQ=255)
                                                   aGATTCACGCAGCGCAGCCAGAACCTGTTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTc                                         <  1:5314522/93‑1 (MQ=255)
                                                   aGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTc                                         >  2:4862156/1‑93 (MQ=255)
                                                    gATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTcc                                        <  2:1462983/93‑1 (MQ=255)
                                                    gATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTcc                                        >  1:2032411/1‑93 (MQ=255)
                                                    gATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTcc                                        <  1:4223619/93‑1 (MQ=255)
                                                    gATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTcc                                        <  1:2224204/93‑1 (MQ=255)
                                                      ttCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCgg                                      <  1:3615263/93‑1 (MQ=255)
                                                        cACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGa                                    >  1:2572129/1‑93 (MQ=255)
                                                         ccgcagcgcagCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGAt                                   <  2:5816916/92‑1 (MQ=255)
                                                         aCGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGAt                                   <  1:3745400/93‑1 (MQ=255)
                                                           gcagcgcagcCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGATCa                                 >  1:5956287/1‑93 (MQ=255)
                                                           gcagcgcagcCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGATCa                                 <  1:4372094/93‑1 (MQ=255)
                                                           gcagcgcagcCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGATCa                                 <  1:897400/93‑1 (MQ=255)
                                                             agcgcagcCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGATCACg                               >  2:77921/1‑93 (MQ=255)
                                                              gcgcagcCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGATCACGc                              >  1:5873178/1‑93 (MQ=255)
                                                              gcgcagcCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGATCACGc                              <  2:5574579/93‑1 (MQ=255)
                                                               cgcagcCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGATCACGcc                             <  2:2290282/93‑1 (MQ=255)
                                                                gcagcCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGATCACGCCg                            <  1:2882511/93‑1 (MQ=255)
                                                                gcagcCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGATCACGCCg                            <  2:4296054/93‑1 (MQ=255)
                                                                gcagcCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGATCACGCCg                            >  1:2853708/1‑93 (MQ=255)
                                                                 cagcCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGATCACGCCGa                           <  2:2734716/93‑1 (MQ=255)
                                                                   gcCAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGATCACGCCGAcc                         >  1:3149699/1‑93 (MQ=255)
                                                                   accAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTCAAGCCGATGTGTGGCTCCAGCGATTCCGGGATCACGCCGAcc                         <  2:3557074/92‑1 (MQ=255)
                                                                    ccAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGATCACGCCGACCa                        <  1:2437464/93‑1 (MQ=255)
                                                                     cAGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGATCACGCCGACCAg                       >  1:3937307/1‑93 (MQ=255)
                                                                      aGAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGATCACGCCGACCAgg                      >  2:719763/1‑93 (MQ=255)
                                                                       gAACCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGATCACGCCGACCAggg                     >  2:1737410/1‑93 (MQ=255)
                                                                        aaCCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGATCACGCCGACCAGGGt                    <  2:6651846/93‑1 (MQ=255)
                                                                        aaCCTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGATCACGCCGACCAGGGt                    <  1:3240681/93‑1 (MQ=255)
                                                                          ccTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGATCACGCCGACCAGGGTCa                  <  2:3782587/93‑1 (MQ=255)
                                                                          ccTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGATCACGCCGACCAGGGTCa                  <  2:1713894/93‑1 (MQ=255)
                                                                           cTGCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGATCACGCCGACCAGGGTCAg                 <  1:4615344/93‑1 (MQ=255)
                                                                             gCTCAAGCGCAGGTTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGATCACGCCGACCAGGGTCAGCt               <  1:710029/93‑1 (MQ=255)
                                                                             gCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGATCACGCCGACCAGGGTCAGCt               >  1:5987596/1‑93 (MQ=255)
                                                                             gCTCAAGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGATCACGCCGACCAGGGTCAGCt               >  1:630346/1‑93 (MQ=255)
                                                                                 aaGCGCAGTCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGATCACGCCGACCAGGGTCAGCttttt           <  2:946096/93‑1 (MQ=255)
                                                                                  aGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGATCACGCCGACCAGGGTCAGCTTTTTc          >  2:4411931/1‑93 (MQ=255)
                                                                                  aGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGATCACGCCGACCAGGGTCAGCTTTTTc          >  1:6057862/1‑93 (MQ=255)
                                                                                  aGCGCAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGATCACGCCGACCAGGGTCAGCTTTTTc          >  1:4756163/1‑93 (MQ=255)
                                                                                     gcAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGATCACGCCGACCAGGGTCAGCTTTTTCGGa       >  2:4368487/1‑93 (MQ=255)
                                                                                      cAGGCTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGATCACGCCGACCAGGGTCAGCTTTTTCGGaa      >  2:1245231/1‑93 (MQ=255)
                                                                                       aGGTTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGATCACGCCGACCAGGGTCAGCTTTTTCGGaaa     <  1:969727/93‑1 (MQ=255)
                                                                                        ggTTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGATCACGCCGACCAGGGTCAGCTTTTTCGGAAAc    <  1:5462963/93‑1 (MQ=255)
                                                                                         gTTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGATCACGCCGACCAGGGTCAGCTTTTTCGGAAACt   <  2:2839534/93‑1 (MQ=255)
                                                                                          |                                                                                            
CCTGCTATCTCTTCAGTCATGAATCGCCTCCCGTGGGATGGCTTCCACGCCAGATTCACGCAGCGCAGCCAGAACCTGCTCAAGCGCAGGTTCAATCATTGCTTCAACCGTCGGCGTTAAGCCGATGTGTGGCTCCAGCGATTCCGGGATCACGCCGACCAGGGTCAGCTTTTTCGGAAACTC  >  NC_000913/3138795‑3138977

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: