BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	485,747	A→G	intergenic (+115/‑13)	acrR → / → aefA	acrAB operon repressor/putative alpha helix protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	485,747	0	A	G	100.0%	1044.9 / NA	283	intergenic (+115/‑13)	acrR/aefA	acrAB operon repressor/putative alpha helix protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (120/163); total (120/163)

Only 100 of 284 total aligned reads displayed.

TCCTGGACATTTTCGTCGTTGCTATTCTGGTTCACTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAACCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTT  >  NC_000913/485657‑485836

tCCTGGACATTTTCGTCGTTGCTATTCTGGTTCACTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGcc                                                                                         <  1:2987260/93‑1 (MQ=255)

 ccTGGACATTTTCGTCGTTGCTATTCTGGTTCACTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCt                                                                                        <  1:4092706/93‑1 (MQ=255)

    ggACATTTTCGTCGTTGCTATTCTGGTTCACTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCttca                                                                                     <  2:421343/93‑1 (MQ=255)

      aCATTTTCGTCGTTGCTATTCTGGTTCACTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCttcatt                                                                                   <  1:5166583/93‑1 (MQ=255)

      aCATTTTCGTCGTTGCTATTCTGGTTCACTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCttcatt                                                                                   >  2:3478153/1‑93 (MQ=255)

       cATTTTCGTCGTTGCTATTCTGGTTCACTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCttcattc                                                                                  >  2:6335403/1‑93 (MQ=255)

       cATTTTCGTCGTTGCTATTCTGGTTCACTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCttcattc                                                                                  >  2:6145526/1‑93 (MQ=255)

       cATTTTCGTCGTTGCTATTCTGGTTCACTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCttcattc                                                                                  <  2:569245/93‑1 (MQ=255)

        aTTTTCGTCGTTGCTATTCTGGTTCACTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCttcattca                                                                                 <  1:3390228/93‑1 (MQ=255)

         ttttCGTCGTTGCTATTCTGGTTCACTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGGTCAGAAGCCTtcattcat                                                                                >  2:4862162/1‑93 (MQ=255)

          tttCGTCGTTGCTATTCTGGTTCACTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATtcatc                                                                               <  1:1106460/93‑1 (MQ=255)

            tcgtcgTTGCTATTCTGGTTCACTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTcatcat                                                                             >  2:4457553/1‑93 (MQ=255)

            tcgtcgTTGCTATTCTGGTTCACTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTcatcat                                                                             <  2:201238/93‑1 (MQ=255)

            tcgtcgTTGCTATTCTGGTTCACTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTcatcat                                                                             <  1:5051618/93‑1 (MQ=255)

              gtcgtTGCTATTCTGGTTCACTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGa                                                                           <  2:5525302/93‑1 (MQ=255)

               tcgtTGCTATTCTGGTTCACTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGAc                                                                          <  2:3141139/93‑1 (MQ=255)

               tcgtTGCTATTCTGGTTCACTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGAc                                                                          <  1:567195/93‑1 (MQ=255)

                  ttGCTATTCTGGTTCACTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTAt                                                                       >  1:6067448/1‑93 (MQ=255)

                  ttGCTATTCTGGTTCACTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTAt                                                                       <  2:915065/93‑1 (MQ=255)

                  ttGCTATTATGGTTCACTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTAt                                                                       >  1:6447927/1‑93 (MQ=255)

                    tcTATTCTGGTTCACTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGt                                                                     <  2:3106530/92‑1 (MQ=255)

                    gCTATTCTGGTTCACTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGt                                                                     <  1:4886197/93‑1 (MQ=255)

                     cTATTCTGGTTCACTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGtt                                                                    <  2:6315803/93‑1 (MQ=255)

                       aTTCTGGTTCACTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTcc                                                                  >  1:1991420/1‑93 (MQ=255)

                        ttCTGGTTCACTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCa                                                                 >  2:3668148/1‑93 (MQ=255)

                        ttCTGGTTCACTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCa                                                                 >  1:3936090/1‑93 (MQ=255)

                        ttCTGGTTCACTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCa                                                                 >  2:208279/1‑93 (MQ=255)

                         tCTGGTTCACTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAg                                                                <  1:718278/93‑1 (MQ=255)

                            gtgtCACTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTAt                                                             <  2:3387525/90‑1 (MQ=255)

                            ggTTCACTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTAt                                                             >  1:2823948/1‑93 (MQ=255)

                             gTTCACTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTAtt                                                            <  2:3286110/93‑1 (MQ=255)

                              ttCACTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTa                                                           >  2:1058394/1‑93 (MQ=255)

                              ttCACTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTa                                                           <  1:4059967/93‑1 (MQ=255)

                               tCACTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTAc                                                          <  2:5423499/93‑1 (MQ=255)

                                cACTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACa                                                         <  1:441634/93‑1 (MQ=255)

                                 ccTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACaa                                                        <  1:5580004/92‑1 (MQ=255)

                                 aCTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACaa                                                        >  1:998804/1‑93 (MQ=255)

                                      gtcgtGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGAt                                                   >  2:4032640/1‑93 (MQ=255)

                                      gtcgtGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGAt                                                   <  1:1237066/93‑1 (MQ=255)

                                      gtcgtGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGAt                                                   >  2:2414285/1‑93 (MQ=255)

                                       tcgtGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATc                                                  <  1:2091013/93‑1 (MQ=255)

                                       tcgtGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATc                                                  >  1:1859916/1‑93 (MQ=255)

                                       tcgtGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATc                                                  <  1:4759274/93‑1 (MQ=255)

                                         gtGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCAc                                                >  2:1118889/1‑93 (MQ=255)

                                          tGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACg                                               <  2:3234622/93‑1 (MQ=255)

                                           gATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACgg                                              <  2:4260422/93‑1 (MQ=255)

                                           gATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACgg                                              >  2:5361636/1‑93 (MQ=255)

                                            atatTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACgga                                             <  1:6382834/93‑2 (MQ=255)

                                             tatTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCa                                            <  1:54181/93‑1 (MQ=255)

                                             tatTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGCTCAGAAGCTTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCa                                            >  2:6569633/1‑93 (MQ=255)

                                               ttCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCAtt                                          >  1:5247659/1‑93 (MQ=255)

                                                tCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCAttt                                         <  2:3801339/93‑1 (MQ=255)

                                                   tGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGt                                      <  1:1468857/93‑1 (MQ=255)

                                                    gCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGtt                                     <  2:2966634/93‑1 (MQ=255)

                                                      ggTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGtttt                                   <  2:2591543/93‑1 (MQ=255)

                                                      ggTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGtttt                                   >  1:4243900/1‑93 (MQ=255)

                                                      ggTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGtttt                                   <  2:6636526/93‑1 (MQ=255)

                                                        tttGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGtttttt                                 <  1:3691512/93‑1 (MQ=255)

                                                         ttGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTc                                <  2:2721947/93‑1 (MQ=255)

                                                          tGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCa                               <  1:4458156/93‑1 (MQ=255)

                                                          tGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCa                               >  1:6285610/1‑93 (MQ=255)

                                                           gACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAg                              >  2:2891961/1‑93 (MQ=255)

                                                           gACTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAg                              >  1:165717/1‑93 (MQ=255)

                                                             cTTTTTCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCa                            <  2:263232/93‑1 (MQ=255)

                                                              tttttCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCAt                           >  1:5345053/1‑93 (MQ=255)

                                                               ttttCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCAtt                          <  2:1410363/93‑1 (MQ=255)

                                                               ttttCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCAtt                          >  1:5141449/1‑93 (MQ=255)

                                                                tttCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCAttt                         <  1:3800417/93‑1 (MQ=255)

                                                                tttCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCAttt                         <  2:3594952/93‑1 (MQ=255)

                                                                  tCAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTAt                       >  1:5966919/1‑93 (MQ=255)

                                                                   cAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTAtt                      <  1:1005922/93‑1 (MQ=255)

                                                                   cAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTAtt                      >  2:3418708/1‑93 (MQ=255)

                                                                   cAGGTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTAtt                      <  2:4634338/93‑1 (MQ=255)

                                                                      gTCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCt                   <  2:1683869/93‑1 (MQ=255)

                                                                       tCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCtt                  <  1:6001178/93‑1 (MQ=255)

                                                                       tCGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCtt                  >  1:3300111/1‑93 (MQ=255)

                                                                        cGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTTAGCATTTATTGCttt                 <  1:2595927/93‑1 (MQ=255)

                                                                        cGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCttt                 <  2:3865527/93‑1 (MQ=255)

                                                                        cGTTCTTCAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCttt                 <  2:4371205/93‑1 (MQ=255)

                                                                           tcttcAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCttttgt              <  2:6294243/93‑1 (MQ=255)

                                                                             ttcAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCttttgttt            <  2:5083245/93‑1 (MQ=255)

                                                                              tcAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCttttgtttt           <  1:156797/93‑1 (MQ=255)

                                                                              tcAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCttttgtttt           >  2:5918234/1‑93 (MQ=255)

                                                                              tcAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCttttgtttt           <  2:1259850/93‑1 (MQ=255)

                                                                               cAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCttttgttttt          <  1:1707045/93‑1 (MQ=255)

                                                                               cAGGTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCttttgttttt          <  1:4567685/93‑1 (MQ=255)

                                                                                 ggTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCttttgtttttgt        >  2:4794242/1‑93 (MQ=255)

                                                                                  gTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTc       <  2:1501598/93‑1 (MQ=255)

                                                                                  gTTCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTc       <  1:2385909/93‑1 (MQ=255)

                                                                                   ttCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCt      <  1:3239739/93‑1 (MQ=255)

                                                                                   ttCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCt      <  1:6573786/93‑1 (MQ=255)

                                                                                    tCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCtt     <  2:743460/93‑1 (MQ=255)

                                                                                    tCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCtt     >  2:1943696/1‑93 (MQ=255)

                                                                                    tCAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCtt     <  2:4089560/93‑1 (MQ=255)

                                                                                    tCAGAAGACTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCtt     >  1:176280/1‑93 (MQ=255)

                                                                                     cAGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTg    <  1:5457551/93‑1 (MQ=255)

                                                                                      aGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGt   >  1:2690860/1‑93 (MQ=255)

                                                                                      aGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGt   <  2:4399052/93‑1 (MQ=255)

                                                                                      aGAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGt   >  2:84837/1‑93 (MQ=255)

                                                                                       gAAGCCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGtt  >  1:1398015/1‑93 (MQ=255)

TCCTGGACATTTTCGTCGTTGCTATTCTGGTTCACTGCGTCGTGATATTCTTGCGGTTTGACTTTTTCAGGTCGTTCTTCAGGTTCAGAAACCTTCATTCATCATGACTATGTTCCAGTATTACAAACGATCACGGCATTTTGTTTTTTCAGCATTTATTGCTTTTGTTTTTGTCTTGTT  >  NC_000913/485657‑485836

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`