BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,472,030	G→A	R54C (CGT→TGT)	rpsL ←	30S ribosomal subunit protein S12

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,472,030	0	G	A	100.0%	1276.3 / NA	324	R54C (CGT→TGT)	rpsL	30S ribosomal subunit protein S12
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (162/162); total (162/162)

Only 100 of 332 total aligned reads displayed.

CACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCA  >  NC_000913/3471940‑3472119

 aCGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCa                                                                                        >  1:6015523/1‑93 (MQ=255)

 aCGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCa                                                                                        >  1:963709/1‑93 (MQ=255)

     atcaggatcaCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACt                                                                                    >  1:5206142/1‑93 (MQ=255)

     atcaggatcaCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACt                                                                                    >  2:5237894/1‑93 (MQ=255)

      tcaggatcaCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACtt                                                                                   >  1:343084/1‑93 (MQ=255)

       caggatcaGGGAGTGCTCCCGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACttt                                                                                  >  1:6442810/1‑93 (MQ=255)

       caggatcaCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACttt                                                                                  >  2:4873350/1‑93 (MQ=255)

          gatcaCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACg                                                                               >  2:1930172/1‑93 (MQ=255)

           atcaCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGc                                                                              >  2:538841/1‑93 (MQ=255)

            tcaCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCa                                                                             <  2:6111666/93‑1 (MQ=255)

            tcaCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCa                                                                             <  2:5316596/93‑1 (MQ=255)

              aCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAgc                                                                           <  2:645156/93‑1 (MQ=255)

              aCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAgc                                                                           <  1:2794002/93‑1 (MQ=255)

              aCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAgc                                                                           <  2:2100411/93‑1 (MQ=255)

              aCGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAgc                                                                           <  1:1525999/93‑1 (MQ=255)

               cGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATCCTTTACGCAgcg                                                                          <  1:1512721/93‑1 (MQ=255)

                ggAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAgcgc                                                                         <  1:3941144/93‑1 (MQ=255)

                ggAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAgcgc                                                                         >  1:3810054/1‑93 (MQ=255)

                 gAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGcgcg                                                                        >  1:2878500/1‑93 (MQ=255)

                 gAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGcgcg                                                                        >  1:2972323/1‑93 (MQ=255)

                 gAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGcgcg                                                                        <  2:6325498/93‑1 (MQ=255)

                  aGTGCTCCTGCAGGTTGGGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGCCGAACACAGCCTCCTTTACGCAGCGCgg                                                                       >  2:4235324/1‑93 (MQ=255)

                    tGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAg                                                                     <  1:127632/93‑1 (MQ=255)

                     gCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGt                                                                    <  1:5264159/93‑1 (MQ=255)

                       tCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGttg                                                                  >  2:6297013/1‑92 (MQ=255)

                       tCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTc                                                                  >  2:5820224/1‑93 (MQ=255)

                         cTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCgg                                                                >  2:3286374/1‑93 (MQ=255)

                         cTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCgg                                                                <  2:1426720/93‑1 (MQ=255)

                          tGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGt                                                               >  2:1052924/1‑93 (MQ=255)

                          tGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGt                                                               >  2:3812182/1‑93 (MQ=255)

                           gCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGtt                                                              <  1:4457162/93‑1 (MQ=255)

                           gCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGtt                                                              >  2:6622942/1‑93 (MQ=255)

                             aGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGtttt                                                            >  2:358352/1‑93 (MQ=255)

                               gTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGtttttt                                                          <  2:1605922/93‑1 (MQ=255)

                                ttGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTa                                                         <  1:4094486/93‑1 (MQ=255)

                                 tgtgACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAg                                                        <  2:5963255/93‑1 (MQ=255)

                                  gtgACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAgg                                                       <  2:4961243/93‑1 (MQ=255)

                                   tgACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGa                                                      >  1:772373/1‑93 (MQ=255)

                                   tgACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGa                                                      <  1:573453/93‑1 (MQ=255)

                                    gACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAg                                                     <  2:1193194/93‑1 (MQ=255)

                                    gACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAg                                                     <  2:3234537/93‑1 (MQ=255)

                                     aCCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGt                                                    <  1:880725/93‑1 (MQ=255)

                                      ccTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTg                                                   >  1:385943/1‑93 (MQ=255)

                                      ccTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTg                                                   <  1:1935284/93‑1 (MQ=255)

                                        ttCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGgt                                                 >  2:3682116/1‑93 (MQ=255)

                                         tCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGgta                                                <  1:3008245/93‑1 (MQ=255)

                                         tCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGgta                                                <  1:72114/93‑1 (MQ=255)

                                          caccacCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGgtag                                               <  1:4884236/93‑1 (MQ=255)

                                           accaccGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGgtagt                                              <  1:1777456/93‑1 (MQ=255)

                                            ccaccGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGgtagta                                             <  2:4000256/93‑1 (MQ=255)

                                            ccaccGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGgtagta                                             >  2:4720971/1‑93 (MQ=255)

                                             caccGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGtat                                            >  1:3470221/1‑93 (MQ=255)

                                              accGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGtata                                           >  1:6226778/1‑93 (MQ=255)

                                              accGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGtata                                           <  1:5556155/93‑1 (MQ=255)

                                                cGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGtatata                                         <  2:702269/93‑1 (MQ=255)

                                                 gATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATac                                        <  2:1577473/93‑1 (MQ=255)

                                                 gATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATac                                        <  1:4702269/93‑1 (MQ=255)

                                                  aTGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATaca                                       <  2:3078479/93‑1 (MQ=255)

                                                   tGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATacac                                      >  2:3351673/1‑93 (MQ=255)

                                                   tGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATacac                                      <  1:49449/93‑1 (MQ=255)

                                                        gAAGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTa                                 >  2:5732967/1‑93 (MQ=255)

                                                         aaGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTAc                                >  2:3006160/1‑93 (MQ=255)

                                                         aaGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTAc                                <  2:4596006/93‑1 (MQ=255)

                                                         aaGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTAc                                <  1:2382598/93‑1 (MQ=255)

                                                          aGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACa                               >  2:3161475/1‑93 (MQ=255)

                                                          aGTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACa                               >  1:3647588/1‑93 (MQ=255)

                                                           gTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACAt                              >  1:5093474/1‑93 (MQ=255)

                                                           gTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACAt                              <  1:2447405/93‑1 (MQ=255)

                                                           gTCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACAt                              <  1:3532243/93‑1 (MQ=255)

                                                            tCACTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATa                             <  2:4512883/93‑1 (MQ=255)

                                                               cTTCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGc                          >  1:1149909/1‑93 (MQ=255)

                                                                ttCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGcc                         >  1:420212/1‑93 (MQ=255)

                                                                 tCGAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCa                        >  1:6580975/1‑93 (MQ=255)

                                                                   gAAACCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACg                      >  1:2684694/1‑93 (MQ=255)

                                                                    aaaCCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGt                     >  1:2629561/1‑93 (MQ=255)

                                                                     aaCCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGtt                    >  2:4809737/1‑93 (MQ=255)

                                                                      aCCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGttt                   >  1:3031779/1‑93 (MQ=255)

                                                                      aCCGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGttt                   <  2:1661027/93‑1 (MQ=255)

                                                                       ccGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGtttt                  <  2:3748643/93‑1 (MQ=255)

                                                                        cGTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTTGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGttttt                 <  1:6654175/93‑1 (MQ=255)

                                                                         gTTAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTg                >  1:5505583/1‑93 (MQ=255)

                                                                          ttAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGc               <  1:4846784/93‑1 (MQ=255)

                                                                          ttAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGc               >  1:6421775/1‑93 (MQ=255)

                                                                          ttAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGc               <  2:800948/93‑1 (MQ=255)

                                                                           tAGTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCg              <  2:6563808/93‑1 (MQ=255)

                                                                             gTCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCggg            >  2:1793789/1‑93 (MQ=255)

                                                                              tCAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGc           <  1:2535354/93‑1 (MQ=255)

                                                                               cAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCa          <  2:937966/93‑1 (MQ=255)

                                                                               cAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCa          <  1:220729/93‑1 (MQ=255)

                                                                               cAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCa          >  2:2354036/1‑93 (MQ=255)

                                                                               cAGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCa          <  2:1261983/93‑1 (MQ=255)

                                                                                aGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCAt         >  2:2445074/1‑93 (MQ=255)

                                                                                aGACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCAt         >  1:4575144/1‑93 (MQ=255)

                                                                                 gACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATg        <  1:4065120/93‑1 (MQ=255)

                                                                                 gACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATg        >  1:4018012/1‑93 (MQ=255)

                                                                                 gACGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTGAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATg        >  2:3548567/1‑93 (MQ=255)

                                                                                   cGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCt      >  2:5532061/1‑93 (MQ=255)

                                                                                   cGAACACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCt      <  2:2779611/93‑1 (MQ=255)

                                                                                     aaCACAGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTc    >  2:5041800/1‑93 (MQ=255)

                                                                                       cacaGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCa  >  1:1898080/1‑93 (MQ=255)

CACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATACGCCACGTTTTTGCGGGCATGCTTCCA  >  NC_000913/3471940‑3472119

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`