BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,634,770	T→C	I91V (ATC→GTC)	yhiN ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,634,770	0	T	C	87.3%	718.1 / 88.1	268	I91V (ATC→GTC)	yhiN	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (14/20); new base C (93/141); total (107/161)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.49e-01

Only 100 of 272 total aligned reads displayed.

CCCTTCTCGCACTCATCCACCAGCATGTCGACAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGATGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTGCGAGTGCAGACTTACAAAAATGCGGATTCTGGCTCAGATAAGC  >  NC_000913/3634679‑3634860

 ccTTCTCGCACTCATCCACCAGCATGTCGACAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGc                                                                                          >  1:86856/1‑93 (MQ=255)

 ccTTCTCGCACTCATCCACCAGCATGTCGACAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGc                                                                                          >  2:5216117/1‑93 (MQ=255)

 ccTTCTCGCACTCATCCACCAGCATGTCGACAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGc                                                                                          <  2:3964924/93‑1 (MQ=255)

 ccTTCTCGCACTCATCCACCAGCATGTCGACAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGc                                                                                          >  1:1717704/1‑93 (MQ=255)

   ttCTCGCACTCATCCACCAGCATGTCGACAATCTGCTGCGCGGAGTCATCGCAGAAGAGATGCCCTAACGTTTTCTCGTGCCAGGCGACGCCg                                                                                        >  2:863153/1‑93 (MQ=255)

     cccGCACTCATCCACCAGCATGTCGACAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCgtg                                                                                      <  1:4271347/91‑1 (MQ=255)

      tcGCACTCATCCACCAGCATGTCGACAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCgtgt                                                                                     <  2:5190053/93‑1 (MQ=255)

      tcGCACTCATCCACCAGCATGTCGACAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTGTTCTCGTGCCAGGCGATGCCgtgt                                                                                     <  1:2807629/93‑1 (MQ=255)

       cGCACTCATCCACCAGCATGTCGACAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGtt                                                                                    <  2:2580838/93‑1 (MQ=255)

        gCACTCATCCACCAGCATGTCGACAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGATGCCGTGttt                                                                                   >  2:3737620/1‑93 (MQ=255)

        gCACTCATCCACCAGCATGTCGACAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGttt                                                                                   >  1:5407771/1‑93 (MQ=255)

         cACTCATCCACCAGCATGTCGACAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTa                                                                                  <  2:6541685/93‑1 (MQ=255)

           cTCATCCACCAGCATGTCGACAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTAtt                                                                                <  2:6278861/93‑1 (MQ=255)

           cTCATCCACCAGCATGTCGACAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTAtt                                                                                >  2:4943324/1‑93 (MQ=255)

            tCATCCACCAGCATGTCGACAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTg                                                                               <  2:4093921/93‑1 (MQ=255)

             cATCCACCAGCATGTCGACAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGa                                                                              >  2:3349615/1‑93 (MQ=255)

             cATCCACCAGCATGTCGACAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGa                                                                              <  2:4522688/93‑1 (MQ=255)

              aTCCACCAGCATGTCGACAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGAc                                                                             <  1:3255217/93‑1 (MQ=255)

               tCCACCAGCATGTCGACAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGAcc                                                                            >  2:2092052/1‑93 (MQ=255)

               tCCACCAGCATGTCGACAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGAcc                                                                            >  2:4263089/1‑93 (MQ=255)

                ccaccaGCATGTCGACAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCa                                                                           <  2:6470455/93‑1 (MQ=255)

                 caccaGCATGTCGACAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAg                                                                          <  1:414408/93‑1 (MQ=255)

                  accaGCATGTCGATAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGATGCCGTGTTTATTGACCAGa                                                                         <  2:161737/93‑1 (MQ=255)

                  accaGCATGTCGACAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGa                                                                         <  2:6619859/93‑1 (MQ=255)

                    caGCATGTCGACAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATc                                                                       <  1:2182042/93‑1 (MQ=255)

                     aGCATGTCGACAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCa                                                                      >  1:2523313/1‑93 (MQ=255)

                      gCATGTCGACAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCaa                                                                     >  2:5649401/1‑93 (MQ=255)

                       cATGTCGACAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAAt                                                                    <  2:936110/93‑1 (MQ=255)

                       cATGTCGACAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAAt                                                                    >  1:3389838/1‑93 (MQ=255)

                        aTGTCGACAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGATGCCGTGTTTATTGACCAGATCAATg                                                                   >  1:2043096/1‑93 (MQ=255)

                        aTGTCGACAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATg                                                                   <  1:1247660/93‑1 (MQ=255)

                         tGTCGACAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGATGCCGTGTTTATTGACCAGATCAATGa                                                                  >  1:2094066/1‑93 (MQ=255)

                         tGTCGACAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGa                                                                  <  2:2299641/93‑1 (MQ=255)

                           tCGACAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGaaa                                                                >  1:4809910/1‑93 (MQ=255)

                           tCGACAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGaaa                                                                <  2:2805813/93‑1 (MQ=255)

                           tCGACAATATGCGGCGCGGAGTCATCGCAGAAGAGGTGCCCTAACGTATTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGata                                                                <  1:5355674/93‑3 (MQ=255)

                            cGACAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAAt                                                               >  2:1108021/1‑93 (MQ=255)

                              aCAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATcc                                                             <  1:4559512/93‑1 (MQ=255)

                              aCAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATcc                                                             <  2:5276400/93‑1 (MQ=255)

                              aCAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATcc                                                             <  1:1811924/93‑1 (MQ=255)

                              aCAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATcc                                                             <  2:2907719/93‑1 (MQ=255)

                               cAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGATGCCGTGTTTATTGACCAGATCAATGAAATccc                                                            >  1:263745/1‑93 (MQ=255)

                               cAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATccc                                                            <  2:4456215/93‑1 (MQ=255)

                               cAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATccc                                                            <  2:4963786/93‑1 (MQ=255)

                                aaTCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCa                                                           <  1:4881073/93‑1 (MQ=255)

                                 aTCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCAc                                                          >  1:621600/1‑93 (MQ=255)

                                  tCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACt                                                         >  1:3604049/1‑93 (MQ=255)

                                  tCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACt                                                         >  2:4773680/1‑93 (MQ=255)

                                    tgctgcGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTgg                                                       <  2:6311285/93‑1 (MQ=255)

                                     gctgcGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTggg                                                      >  2:3230229/1‑93 (MQ=255)

                                     gctgcGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTggg                                                      <  1:5674675/93‑1 (MQ=255)

                                       tgcGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTa                                                    >  1:1097038/1‑93 (MQ=255)

                                        gcgcGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTaa                                                   >  2:2758496/1‑93 (MQ=255)

                                         cgcgGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTaaa                                                  >  1:420291/1‑93 (MQ=255)

                                          gcgGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGATGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTaaaa                                                 <  1:3989301/93‑1 (MQ=255)

                                          gcgGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTaaaa                                                 >  1:835621/1‑93 (MQ=255)

                                           cgGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTTACCAGATCAATGAAATCCCACTGGGTAAAAc                                                >  1:778266/1‑93 (MQ=255)

                                            ggAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACg                                               >  1:153712/1‑93 (MQ=255)

                                            ggAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACg                                               <  1:1360773/93‑1 (MQ=255)

                                             gAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGt                                              >  1:3960440/1‑93 (MQ=255)

                                             gAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGt                                              >  1:4708249/1‑93 (MQ=255)

                                             gAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGt                                              >  2:1482533/1‑93 (MQ=255)

                                              aGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTg                                             <  1:5989916/93‑1 (MQ=255)

                                              aGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTg                                             <  1:4240402/93‑1 (MQ=255)

                                                tCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTGCg                                           >  1:1187390/1‑93 (MQ=255)

                                                tCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTGCg                                           <  2:4678018/93‑1 (MQ=255)

                                                   tCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTGCGAGt                                        <  1:174640/93‑1 (MQ=255)

                                                   tCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTGCGAGt                                        <  1:6630745/93‑1 (MQ=255)

                                                    cGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTGCGAGTg                                       <  2:1321692/93‑1 (MQ=255)

                                                      cAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTGCGAGTGCa                                     <  1:5819038/93‑1 (MQ=255)

                                                      cAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTGCGAGTGCa                                     >  2:180980/1‑93 (MQ=255)

                                                       agaagaGTTGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTGCGAGTGCAg                                    <  1:2469241/93‑1 (MQ=255)

                                                              ttGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTGCGAGTGCAGACTTACa                             <  2:472904/93‑1 (MQ=255)

                                                               tGCCCTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTGCGAGTGCAGACTTACaa                            <  1:2759651/93‑1 (MQ=255)

                                                                  ccTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTTAAACGTGCGAGTGCAGACTTACaaaaa                         >  1:6070743/1‑93 (MQ=255)

                                                                  ccTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTGCGAGTGCAGACTTACaaaaa                         <  2:218558/93‑1 (MQ=255)

                                                                  ccTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTGCGAGTGCAGACTTACaaaaa                         >  1:4992141/1‑93 (MQ=255)

                                                                   cTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTGCGAGTGCAGACTTACAAAAAt                        >  1:3771107/1‑93 (MQ=255)

                                                                   cTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTGCGAGTGCAGACTTACAAAAAt                        <  2:3425960/93‑1 (MQ=255)

                                                                   cTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTGCGAGTGCAGACTTACAAAAAt                        <  1:5114873/93‑1 (MQ=255)

                                                                   cTAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTGCGAGTGCAGACTTACAAAAAt                        <  2:1176556/93‑1 (MQ=255)

                                                                    tAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTGCGAGTGCAGACTTACAAAAATg                       >  2:5083582/1‑93 (MQ=255)

                                                                    tAACGTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTGCGAGTGCAGACTTACAAAAATg                       >  1:4316493/1‑93 (MQ=255)

                                                                      aCGTTTTCTCGTGCCAGGCGATGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTGCGAGTGCAGACTTACAAAAATGCg                     <  1:3149025/93‑1 (MQ=255)

                                                                      aCGTTTTCTCGTGCCAGGCGATGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTGCGAGTGCAGACTTACAAAAATGCg                     <  1:2335273/93‑1 (MQ=255)

                                                                        gTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTGCGAGTGCAGACTTACAAAAATGCGGa                   <  1:1209943/93‑1 (MQ=255)

                                                                        gTTTTCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTGCGAGTGCAGACTTACAAAAATGCGGa                   >  1:5248126/1‑93 (MQ=255)

                                                                         ttttCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTGCGAGTGCAGACTTACAAAAATGCGGAt                  <  2:4134520/93‑1 (MQ=255)

                                                                         ttttCTCGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTGCGAGTGCAGACTTACAAAAATGCGGAt                  >  1:5267814/1‑93 (MQ=255)

                                                                           ttCTCGTGCCAGGCGATGCCGCGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTGCGAGTGCAGACTTACAAAAATGCGGATTc                <  1:5485469/93‑1 (MQ=255)

                                                                             ctcGTGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTGCGAGTGCAGACTTACAAAAATGCGGATTCTg              <  2:1668155/93‑1 (MQ=255)

                                                                                 tGCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTGCGAGTGCAGACTTACAAAAATGCGGATTCTGGCTc          <  2:516477/93‑1 (MQ=255)

                                                                                 gggcAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTGCGAGTGCAGACTTACAAAAATGCGGATTCTGGCTc          <  2:6069983/90‑1 (MQ=255)

                                                                                  gCCAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTGCGAGTGCAGACTTACAAAAATGCGGATTCTGGCTCa         >  2:5859548/1‑93 (MQ=255)

                                                                                    cAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTGCGAGTGCAGACTTACAAAAATGCGGATTCTGGCTCAGa       <  1:1007156/93‑1 (MQ=255)

                                                                                    cAGGCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTGCGAGTGCAGACTTACAAAAATGCGGATTCTGGCTCAGa       <  2:3750241/93‑1 (MQ=255)

                                                                                       gCGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTGCGAGTGCAGACTTACAAAAATGCGGATTCTGGCTCAGATaa    <  1:3291794/93‑1 (MQ=255)

                                                                                        cGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTGCGAGTGCAGACTTACAAAAATGCGGATTCTGGCTCAGATAAg   <  2:2517814/93‑1 (MQ=255)

                                                                                        cGACGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTGCGAGTGCAGACTTACAAAAATGCGGATTCTGGCTCAGATAAg   <  2:744042/93‑1 (MQ=255)

                                                                                         gATGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTGCGAGTGCAGACTTACAAAAATGCGGATTCTGGCTCAGATAAgc  <  1:4378396/93‑1 (MQ=255)

CCCTTCTCGCACTCATCCACCAGCATGTCGACAATCTGCTGCGCGGAGTCATCGCAGAAGAGTTGCCCTAACGTTTTCTCGTGCCAGGCGATGCCGTGTTTATTGACCAGATCAATGAAATCCCACTGGGTAAAACGTGCGAGTGCAGACTTACAAAAATGCGGATTCTGGCTCAGATAAGC  >  NC_000913/3634679‑3634860

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`