| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,499,168 | C→T | intergenic (+11/+503) | yjgZ → / ← yi41 | hypothetical protein/IS4 hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,499,168 | 0 | C | T | 88.0% | 784.4 / 67.8 | 258 | intergenic (+11/+503) | yjgZ/yi41 | hypothetical protein/IS4 hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (19/12); new base T (124/103); total (143/115) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.65e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.67e-01 | |||||||||||
Only 100 of 266 total aligned reads displayed.
GTCCTGACGCGTCTGCCGGAGTGGCCGGAGGAGAGGTTGGCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGCCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAGGAAATGAGCTAGAGCAGTAAACACGCGGGCT > NC_000913/4499077‑4499259 | tCCTGACGCGTCTGCCGGAGTGGCCGGAGGAGAGGTTGGCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCg < 2:6354157/93‑1 (MQ=255) tCCTGACGCGTCTGCCGGAGTGGCCGGAGGAGAGGTTGGCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCg < 2:303189/93‑1 (MQ=255) tCCTGACGCGTCTGCCGGAGTGGCCGGAGGAGAGGTTGGCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCg > 2:2473079/1‑93 (MQ=255) tGACGCGTCTGCCGGAGTGGCCGGAGGAGAGGTTGGCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCa > 2:2042651/1‑93 (MQ=255) tGACGCGTCTGCCGGAGTGGCCGGAGGAGAGGTTGGCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCa > 1:215268/1‑93 (MQ=255) tGACGCGTCTGCCGGAGTGGCCGGAGGAGAGGTTGGCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGCCGTCa < 2:618962/93‑1 (MQ=255) gACGCGTCTGCCGGAGTGGCCGGAGGAGAGGCTGGCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAg > 1:3905060/1‑93 (MQ=255) gcgTCTGCCGGAGTGGCCGGAGGAGAGGTTGGCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGgtg < 1:808943/93‑1 (MQ=255) gcgTCTGCCGGAGTGGCCGGAGGAGAGGTTGGCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGgtg < 2:669425/93‑1 (MQ=255) gcgTCTGCCGGAGTGGCCGGAGGAGAGGTTGGCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGgtg > 2:2230561/1‑93 (MQ=255) cgTCTGCCGGAGTGGCCGGAGGAGAGGTTGGCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGgtgt < 1:1131759/93‑1 (MQ=255) tCTGCCGGAGTGGCCGGAGGAGAGGTTGGCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGttt < 2:6404338/93‑1 (MQ=255) tGCCGGAGTGGCCGGAGGAGAGGTTGGCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGCCGTCAGGTGTTtgt < 1:5206904/93‑1 (MQ=255) gCCGGAGTGGCCGGAGGAGAGGTTGGCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTtgtg > 1:713651/1‑93 (MQ=255) ccGGAGTGGCCGGAGGAGAGGTTGGCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGc < 1:2837595/93‑1 (MQ=255) cGGAGTGGCCGGAGGAGAGGTTGGCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCa < 2:1838028/93‑1 (MQ=255) cGGAGTGGCCGGAGGAGAGGTTGGCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCa > 1:3731621/1‑93 (MQ=255) ggAGTGGCCGGAGGAGAGGTTGGCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCAc < 2:1346642/93‑1 (MQ=255) ggAGTGGCCGGAGGAGAGGTTGGCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCAc < 1:408148/93‑1 (MQ=255) ggAGTGGCCGGAGGAGAGGTTGGCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCAc < 1:4235526/93‑1 (MQ=255) ggCCGGAGGAGAGGTTGGCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGCCGTCAGGTGTTTGTGCACCGGGc > 2:1193575/1‑93 (MQ=255) gCCGGAGGAGAGGTTGGCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGcc > 2:1969025/1‑93 (MQ=255) ccGGAGGAGAGGTTGGCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCa > 2:851448/1‑93 (MQ=255) ccGGAGGAGAGGTTGGCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGGGTTTGTGCACCGGGCCa > 1:2013066/1‑93 (MQ=255) cGGAGGAGAGGTTGGCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCAt < 2:6296012/93‑1 (MQ=255) ggaggaGAGGTTGGCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATa > 2:2879510/1‑93 (MQ=255) ggaggaGAGGTTGGCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATa > 2:5240724/1‑93 (MQ=255) ggaggaGAGGTTGGCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATa > 2:970290/1‑93 (MQ=255) ggaggaGAGGTTGGCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATa > 1:4202386/1‑93 (MQ=255) ggaggaGAGGTTGGCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGCCGTCAGGTGTTTGTGCACCGGGCCATa < 2:3798770/93‑1 (MQ=255) ggagAGGTTGGCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAAcc < 2:6144191/93‑1 (MQ=255) gTTGGCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGt > 2:5056912/1‑93 (MQ=255) tGGCTGAGTTACTGCCTCTTGAGGTCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTg < 2:5624037/93‑1 (MQ=255) tGGCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTg < 2:3388790/93‑1 (MQ=255) ggCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTgg > 1:4426681/1‑93 (MQ=255) ggCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTgg > 1:5867489/1‑93 (MQ=255) ggCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGCCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTgg < 1:1805707/93‑1 (MQ=255) cTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGa < 2:4230143/93‑1 (MQ=255) tGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTTCACCGGGCCATAACCTGCAGTTGGGaa > 2:5869867/1‑93 (MQ=255) tGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGaa < 2:6036073/93‑1 (MQ=255) tGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGaa > 2:2389880/1‑93 (MQ=255) tGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGaa > 2:2348521/1‑93 (MQ=255) tGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGaa < 1:4761064/93‑1 (MQ=255) aGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAAtt < 1:230145/93‑1 (MQ=255) gTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTg > 1:5784368/1‑93 (MQ=255) gTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTg > 1:2828121/1‑93 (MQ=255) ttACTGCCTCTTGAGGGGTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGa < 2:3163840/93‑1 (MQ=255) ttACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGa < 1:248216/93‑1 (MQ=255) ttACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGa < 2:4341934/93‑1 (MQ=255) tACTGCCTCTTGAGGGCTTTGCCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGaa < 1:1117249/93‑1 (MQ=255) tACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGaa < 2:3688427/93‑1 (MQ=255) tGCCTCTTGAGGGCTTTCCCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCTTAACCTGCAGTTGGGAATTGAACGc < 1:144133/93‑1 (MQ=255) gCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGcc > 2:1024584/1‑93 (MQ=255) gCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGcc > 1:1545772/1‑93 (MQ=255) ccTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCt < 1:1873434/93‑1 (MQ=255) ctctTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTg > 2:17516/1‑93 (MQ=255) ctctTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTg > 2:5988111/1‑93 (MQ=255) ctctTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGCGCCATAACCTGCAGTTGGGAATTGAACGCCTg > 1:3337615/1‑93 (MQ=255) tctTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGa > 1:1227550/1‑93 (MQ=255) ttGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGaca > 2:1669827/1‑93 (MQ=255) ttGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGaca > 1:5837171/1‑93 (MQ=255) tGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGacaa > 1:3955969/1‑93 (MQ=255) tGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGacaa > 1:4940245/1‑93 (MQ=255) aGGGCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGacaaca < 1:3813783/93‑1 (MQ=255) gggCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAg < 2:5683255/93‑1 (MQ=255) ggCTTTACGTTCTTCGGGTAAGTGATACCTGTCGTCAGGCGGTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAgg > 1:6499476/1‑93 (MQ=255) gCTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAGGa < 2:2532510/93‑1 (MQ=255) cTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAGGaa < 2:6486451/93‑1 (MQ=255) cTTTACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAGGaa < 2:5834191/93‑1 (MQ=255) tttACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAGGaaa > 1:1030499/1‑93 (MQ=255) tttACCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAGGaaa < 1:6340918/93‑1 (MQ=255) tACCTTCTTCGGGTAAGTGATACCTGCCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAGGAAATg > 2:5160553/1‑93 (MQ=255) aCCTTCTTCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAGGAAATGa < 1:3160098/93‑1 (MQ=255) ccTTCTTCGGGTAAGTGATACCTGCCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAGGAAATGAg > 2:5966536/1‑93 (MQ=255) cttctgCGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAGGAAATGAGc < 1:594129/93‑1 (MQ=255) ctgcttcGGGTAAGTGATACCTGCCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAGGAAATGAGc < 1:1303915/90‑1 (MQ=255) ttcttcGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAGGAAATGAGCt < 1:552636/93‑1 (MQ=255) ttcttcGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAGGAAATGAGCt < 2:5448850/93‑1 (MQ=255) tcttcGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAGGAAATGAGCTa > 1:5443405/1‑93 (MQ=255) ttcGGGTAAGTGATACCTGTCGTCAGTTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAGGAAATGAGCTaga < 1:6266675/93‑1 (MQ=255) ttcGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAGGAAATGAGCTaga > 1:3874412/1‑93 (MQ=255) tcGGGTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAGGAAATGAGCTagag < 2:3188395/93‑1 (MQ=255) tcGGGTAAGTGATACCTGCCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAGGAAATGAGCTagag > 2:575479/1‑93 (MQ=255) gggTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAGGAAATGAGCTAGAGCa < 2:4801219/93‑1 (MQ=255) ggTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAGGAAATGAGCTAGAGCAg > 1:6099446/1‑93 (MQ=255) ggTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAGGAAATGAGCTAGAGCAg < 1:1698861/93‑1 (MQ=255) ggTAAGTGATACCTGCCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAGGAAATGAGCTAGAGCAg > 1:53669/1‑93 (MQ=255) gTAAGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAGGAAATGAGCTAGAGCGGt > 2:5733224/1‑93 (MQ=255) aaGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAGGAAATGAGCTAGAGCAGTaa > 1:4479731/1‑93 (MQ=255) aaGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAGGAAATGAGCTAGAGCAGTaa > 2:652603/1‑93 (MQ=255) aGTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAGGAAATGAGCTAGAGCAGTaaa < 2:4053918/93‑1 (MQ=255) aGTGATACCTGCCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAGGAAATGAGCTAGAGCAGTaaa < 1:3032115/93‑1 (MQ=255) gTGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGACTGACAACAGGAAATGAGCTAGAGCAGTAAac > 2:4706782/1‑93 (MQ=255) tGATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAGGAAATGAGCTAGAGCAGTAAaca < 1:5606247/93‑1 (MQ=255) gATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGACAACGGGAAATGAGCTAGAGCAGTAAacac < 2:451542/93‑1 (MQ=255) gATACCTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAGGAAATGAGCTAGAGCAGTAAacac < 2:807359/93‑1 (MQ=255) cTGTCGTCCGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAGGAAATGAGCTAGAGCAGTAAACACGCggg > 1:6464803/1‑93 (MQ=255) cTGTCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAGGAAATGAGCTAGAGCAGTAAACACGCggg > 1:55942/1‑93 (MQ=255) tGCCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAGGAAATGAGCTAGAGCAGTAAACACGCGGGc > 1:4592068/1‑93 (MQ=255) gCCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAGGAAATGAGCTAGAGCAGTAAACACGCGGGCt > 2:5516093/1‑93 (MQ=255) | GTCCTGACGCGTCTGCCGGAGTGGCCGGAGGAGAGGTTGGCTGAGTTACTGCCTCTTGAGGGCTTTACCTTCTTCGGGTAAGTGATACCTGCCGTCAGGTGTTTGTGCACCGGGCCATAACCTGCAGTTGGGAATTGAACGCCTGACAACAGGAAATGAGCTAGAGCAGTAAACACGCGGGCT > NC_000913/4499077‑4499259 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |