BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	725,321	T→C	T313T (ACA→ACG)	kdpB ←	KdpB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	725,321	0	T	C	90.7%	730.6 / 48.3	247	T313T (ACA→ACG)	kdpB	KdpB
Reads supporting (aligned to +/- strand): ref base T (10/13); new base C (108/116); total (118/129)
Fisher's exact test for biased strand distribution p-value = 8.27e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 259 total aligned reads displayed.

CAGCCAGCGAAGCCAGTTGTGCGGCGTCAGCCAGCGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGTGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCTGCCGCTTCAACTGCACGTCCGCTGGTGGCAATCACATTCGCGCCT  >  NC_000913/725230‑725411

  gccagcGAAGCCAGTTGTGCGGCGTCAGCCAGCGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGcgtg                                                                                         >  1:6076392/1‑93 (MQ=255)

   ccagcGAAGCCAGTTGTGCGGCGTCAGCCAGCGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGa                                                                                        <  1:4684486/93‑1 (MQ=255)

    cagcGAAGCCAGTTGTGCGGCGTCAGCCAGCGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGAt                                                                                       >  2:4563620/1‑93 (MQ=255)

     agcGAAGCCAGTTGTGCGGCGTCAGCCAGCGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATg                                                                                      <  2:5674710/93‑1 (MQ=255)

     agcGAAGCCAGTTGTGCGGCGTCAGCCAGCGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATg                                                                                      <  2:528553/93‑1 (MQ=255)

     agcGAAGCCAGTTGTGCGGCGTCAGCCAGCGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATg                                                                                      >  2:2456653/1‑93 (MQ=255)

       ggAAGCCAGTTGTGCGGCGTCAGCCAGCGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGTGTGATGGt                                                                                    <  1:1171853/92‑1 (MQ=255)

       cGAAGCCAGTTGTGCGGCGTCAGCCAGCGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGt                                                                                    <  2:3707077/93‑1 (MQ=255)

       cGAAGCCAGTTGTGCGGCGTCAGCCAGCGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGt                                                                                    <  1:3655175/93‑1 (MQ=255)

       cGAAGCCAGTTGTGCGGCGTCAGCCAGCGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGt                                                                                    <  1:5351403/93‑1 (MQ=255)

        gAAGCCAGTTGTGCGGCGTCAGCCAGCGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTg                                                                                   >  2:5825945/1‑93 (MQ=255)

         aaGCCAGTTGTGCGGCGTCAGCCAGCGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGc                                                                                  >  2:4918142/1‑93 (MQ=255)

         aaGCCAGTTGTGCGGCGTCAGCCAGCGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGc                                                                                  <  2:3634469/93‑1 (MQ=255)

         aaGCCAGTTGTGCGGCGTCAGCCAGCGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGc                                                                                  >  2:5423331/1‑93 (MQ=255)

         aaGCCAGTTGTGCGGCGTCAGCCAGCGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGc                                                                                  >  1:4793371/1‑93 (MQ=255)

         aaGCCAGTTGTGCGGCGTCAGCCAGCGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGc                                                                                  >  1:3122720/1‑93 (MQ=255)

          aGCCAGTTGTGCGGCGTCAGCCAGCGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGcc                                                                                 <  2:2336890/93‑1 (MQ=255)

          aGCCAGTTGTGCGGCGTCAGCCAGCGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGcc                                                                                 >  2:6237883/1‑93 (MQ=255)

          aGCCAGTTGTGCGGCGTCAGCCAGCGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGcc                                                                                 <  1:4368746/93‑1 (MQ=255)

           gCCAGTTGTGCGGCGTCAGCCAGCGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCg                                                                                >  1:1663907/1‑93 (MQ=255)

            ccAGTTGTGCGGCGTCAGCCAGCGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCgg                                                                               <  2:3798961/93‑1 (MQ=255)

            ccAGTTGTGCGGCGTCAGCCAGCGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCgg                                                                               <  1:3910136/93‑1 (MQ=255)

                     cggcgTCAGCCAGCGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGTGTGATGGTGCCGGTTTTATCCa                                                                      <  1:3825798/93‑1 (MQ=255)

                     cggcgTCAGCCAGCGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCa                                                                      <  2:833804/93‑1 (MQ=255)

                      ggcgTCAGCCAGCGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAg                                                                     <  1:1047734/93‑1 (MQ=255)

                       gcgTCAGCCAGCGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGt                                                                    <  1:141485/93‑1 (MQ=255)

                       gcgTCAGCCAGCGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGCGCCGGTTTTATCCAGt                                                                    >  1:2667328/1‑93 (MQ=255)

                        cgTCAGCCAGCGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTa                                                                   <  1:1861390/93‑1 (MQ=255)

                        cgTCAGCCAGCGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTa                                                                   >  2:121547/1‑93 (MQ=255)

                        cgTCAGCCAGCGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTa                                                                   >  1:4620472/1‑93 (MQ=255)

                         gTCAGCCAGCGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAg                                                                  >  1:1508364/1‑93 (MQ=255)

                          tCAGCCAGCGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGTGTGATGGTGCCGGTTTTATCCAGTAGc                                                                 >  2:6069127/1‑93 (MQ=255)

                          tCAGCCAGCGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGTGTGATGGTGCCGGTTTTATCCAGTAGc                                                                 >  1:5440017/1‑93 (MQ=255)

                          tCAGCCAGCGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGc                                                                 <  2:4353876/93‑1 (MQ=255)

                          tCAGCCAGCGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGc                                                                 >  1:5649271/1‑93 (MQ=255)

                           cagccagcGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCa                                                                >  2:5108256/1‑93 (MQ=255)

                            agccagcGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAg                                                               <  2:301072/93‑1 (MQ=255)

                            agccagcGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCAAGTAGCAg                                                               <  1:6455519/93‑1 (MQ=255)

                             gccagcGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTTCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGa                                                              >  1:3552810/1‑93 (MQ=255)

                             gccagcGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGa                                                              <  2:6126637/93‑1 (MQ=255)

                              ccagcGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGTGTGATGGTGCCGGTTTTATCCAGTAGCAGaa                                                             <  1:291041/93‑1 (MQ=255)

                              ccagcGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGaa                                                             <  1:5511666/93‑1 (MQ=255)

                               cagcGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGaac                                                            >  1:3701287/1‑93 (MQ=255)

                                agcGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGaacg                                                           >  2:2567258/1‑93 (MQ=255)

                                 gcGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGTGTGATGGTGCCGGTTTTATCCAGTAGCAGaacgt                                                          >  1:5145299/1‑93 (MQ=255)

                                  cGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGaacgtc                                                         <  1:2738424/93‑1 (MQ=255)

                                  cGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGaacgtc                                                         >  1:4773873/1‑93 (MQ=255)

                                  cGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGGGCCGGTTTTATCCAGTAGCAGaacgtc                                                         >  1:2834101/1‑93 (MQ=255)

                                    ttttttCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGTGTGATGGTGCCGGTTTTATCCAGTAGCAGaacgtcaa                                                       <  1:2472218/93‑1 (MQ=255)

                                    ttttttCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGaacgtcaa                                                       <  1:3937895/93‑1 (MQ=255)

                                    ttttttCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGaacgtcaa                                                       >  2:800548/1‑93 (MQ=255)

                                    ttttttCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGaacgtcaa                                                       >  1:5805795/1‑93 (MQ=255)

                                     tttttCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGaacgtcaac                                                      <  2:4106730/93‑1 (MQ=255)

                                     tttttCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGaacgtcaac                                                      <  2:4205163/93‑1 (MQ=255)

                                      ttttCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGaacgtcaacg                                                     <  1:1135673/93‑1 (MQ=255)

                                       tttCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGaacgtcaacgt                                                    <  1:2177038/93‑1 (MQ=255)

                                        ttCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGaacgtcaacgtc                                                   >  1:2130935/1‑93 (MQ=255)

                                          cATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCAc                                                 <  1:4163931/93‑1 (MQ=255)

                                          cATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCAc                                                 >  1:4012173/1‑93 (MQ=255)

                                           aTCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGTGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCAcc                                                <  1:5541490/93‑1 (MQ=255)

                                           aTCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCAcc                                                >  2:5973995/1‑93 (MQ=255)

                                            tCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCt                                               <  2:5762013/93‑1 (MQ=255)

                                            tCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCt                                               <  2:6492914/93‑1 (MQ=255)

                                            tCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCt                                               >  1:6629658/1‑93 (MQ=255)

                                            tCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCt                                               >  1:3012704/1‑93 (MQ=255)

                                              cACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCTGc                                             >  2:2916325/1‑93 (MQ=255)

                                               aCGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCTGcc                                            <  2:6372845/93‑1 (MQ=255)

                                                 gCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCTGCCGc                                          <  2:1926232/93‑1 (MQ=255)

                                                  cccTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCTGCCGCt                                         >  1:5189714/1‑93 (MQ=255)

                                                    cTGCGCGGGGATAACCTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCTGCCGCTTc                                       <  1:5455538/93‑1 (MQ=255)

                                                     tGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCTGCCGCTTCa                                      >  2:2276969/1‑93 (MQ=255)

                                                      gcgcGGGGATAAACTCCGACGCCTGACGGTTACCGAGTGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCTGCCGCTTCac                                     >  1:870442/1‑92 (MQ=255)

                                                        gcgGGGATAAACTCCGACGCCTGACGGTTCCCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCTGCCGCTTCAACt                                   <  1:3269096/93‑1 (MQ=255)

                                                           gggATAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCTGCCGCTTCAACTGCa                                <  2:753153/93‑1 (MQ=255)

                                                            ggATAAACTCCGACGCCTGACGGTTACCGAGTGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCTGCCGCTTCAACTGCAc                               <  2:3152525/93‑1 (MQ=255)

                                                               tAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCTGCCGCTTCAACTGCACGTc                            <  2:2713477/93‑1 (MQ=255)

                                                               tAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCTGCCGCTTCAACTGCACGTc                            <  2:1769302/93‑1 (MQ=255)

                                                               tAAACTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCTGCCGCTTCAACTGCACGTc                            <  2:1449584/93‑1 (MQ=255)

                                                                aaaCTCCGACGCCTGACGGTTACCGAGTGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCTGCCGCTTCAACTGCACGTcc                           <  2:5574852/93‑1 (MQ=255)

                                                                 aaCTCCGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCTGCCGCTTCAACTGCACCTCCg                          >  1:1012422/1‑93 (MQ=255)

                                                                      cGACGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCTGCCGCTTCAACTGCACGTCCGCtggt                     <  2:2546040/93‑1 (MQ=255)

                                                                        aCGCCGGACGGTTCCCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCACAACGTAAACGTCACCTGCCGCTTCAACTGCACGTCCGCtggtgg                   <  1:3759427/93‑1 (MQ=255)

                                                                         cGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCTGCCGCTTCAACTGCACGTCCGCTGGTGGc                  >  1:5757606/1‑93 (MQ=255)

                                                                         cGCCTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCTGCCGCTTCAACTGCACGTCCGCTGGTGGc                  <  1:6023270/93‑1 (MQ=255)

                                                                          gCCTGACGGTTGCCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCTGCCGCTTCAACTGCACGTCCGCTGGTGGCa                 >  1:3031012/1‑93 (MQ=255)

                                                                          gCCTGACGGTTACCGAGTGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCTGCCGCTTCAACTGCACGTCCGCTGGTGGCa                 >  2:5376105/1‑93 (MQ=255)

                                                                           ccTGACGGTTACCGAGTGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCTGCCGCTTCAACTGCACGTCCGCTGGTGGCaa                >  1:6340799/1‑93 (MQ=255)

                                                                           ccTGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCTGCCGCTTCAACTGCACGTCCGCTGGTGGCaa                >  1:4491584/1‑93 (MQ=255)

                                                                             tGACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCTGCCGCTTCAACTGCACGTCCGCTGGTGGCAATc              <  1:1361533/93‑1 (MQ=255)

                                                                              gACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCTGCCGCTTCAACTGCACGTCCGCTGGTGGCAATca             <  2:2072350/93‑1 (MQ=255)

                                                                              gACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCTGCCGCTTCAACTGCACGTCCGCTGGTGGCAATca             <  1:1605220/93‑1 (MQ=255)

                                                                              gACGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCTGCCGCTTCAACTGCACGTCCGCTGGTGGCAATca             >  1:3328706/1‑93 (MQ=255)

                                                                               aCGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCTGCCGCTTCAACTGCACGTCCGCTGGTGGCAATcac            >  2:4816155/1‑93 (MQ=255)

                                                                               aCGGTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCTGCCGCTTCAACTGCACGTCCGCTGGTGGCAATcac            >  2:6580109/1‑93 (MQ=255)

                                                                                 ggTTACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCTGCCGCTTCAACTGCACGTCCGCTGGTGGCAATCACAt          >  1:6276715/1‑93 (MQ=255)

                                                                                   ttACCGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCTGCCGCTTCAACTGCACGTCCGCTGGTGGCAATCACATTc        >  2:1629360/1‑93 (MQ=255)

                                                                                      ccGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCTGCCGCTTCAACTGCACGTCCGCTGGTGGCAATCACATTcgcg     >  2:3553189/1‑93 (MQ=255)

                                                                                      ccGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCTGCCGCTTCAACTGCACGTCCGCTGGTGGCAATCACATTcgcg     >  1:2442986/1‑93 (MQ=255)

                                                                                       cGAGCGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCTGCCGCTTCAACTGCACGTCCGCTGGTGGCAATCACATTCgcgc    <  2:4631840/93‑1 (MQ=255)

                                                                                         aGTGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCTGCCGCTTCAACTGCACGTCCGCTGGTGGCAATCACATTCGCGCCt  <  1:6145800/93‑1 (MQ=255)

CAGCCAGCGAAGCCAGTTGTGCGGCGTCAGCCAGCGTTTTTTCATCCACGCCCTGCGCGGGGATAAACTCCGACGCCTGACGGTTACCGAGTGTGATGGTGCCGGTTTTATCCAGTAGCAGAACGTCAACGTCACCTGCCGCTTCAACTGCACGTCCGCTGGTGGCAATCACATTCGCGCCT  >  NC_000913/725230‑725411

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`