BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	778,625	T→C	R112R (CGT→CGC)	pal →	peptidoglycan‑associated lipoprotein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	778,625	0	T	C	100.0%	859.5 / NA	236	R112R (CGT→CGC)	pal	peptidoglycan‑associated lipoprotein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (113/123); total (113/123)

Only 100 of 241 total aligned reads displayed.

TGACTTCGCTCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGTGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGCGTTTCTGCAGACCA  >  NC_000913/778535‑778714

tGACTTCGCTCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCgg                                                                                         >  1:3303998/1‑93 (MQ=255)

tGACTTCGCTCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCgg                                                                                         >  2:1369915/1‑93 (MQ=255)

 gACTTCGCTCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGt                                                                                        >  2:5305790/1‑93 (MQ=255)

  aCTTCGCTCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTa                                                                                       >  1:860901/1‑93 (MQ=255)

   cTTCGCTCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTAc                                                                                      >  2:5077719/1‑93 (MQ=255)

   cTTCGCTCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTAc                                                                                      >  1:4761444/1‑93 (MQ=255)

    ttCGCTCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACt                                                                                     >  2:948948/1‑93 (MQ=255)

    ttCGCTCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACt                                                                                     >  2:1571220/1‑93 (MQ=255)

       gCTCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCACCCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCg                                                                                  <  2:3467635/93‑1 (MQ=255)

       gCTCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCg                                                                                  >  1:155684/1‑93 (MQ=255)

        cTCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCgg                                                                                 >  2:5266532/1‑93 (MQ=255)

         tCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGa                                                                                >  2:1166047/1‑93 (MQ=255)

         tCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGa                                                                                >  2:5884446/1‑93 (MQ=255)

         tCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGa                                                                                >  2:2444993/1‑93 (MQ=255)

            aaTGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATa                                                                             >  1:2359412/1‑93 (MQ=255)

             aTGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATac                                                                            <  1:1714017/93‑1 (MQ=255)

               gCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATacaa                                                                          <  1:4968068/93‑1 (MQ=255)

                cTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATacaac                                                                         <  2:1548096/93‑1 (MQ=255)

                 tGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATacaaca                                                                        >  2:278395/1‑93 (MQ=255)

                   gATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACAtc                                                                      >  1:3378212/1‑93 (MQ=255)

                     tGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACAtctc                                                                    >  2:3817436/1‑93 (MQ=255)

                      gCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTcc                                                                   <  1:3534745/93‑1 (MQ=255)

                      gCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTcc                                                                   <  1:5661529/93‑1 (MQ=255)

                      gCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGCCACGCGGACGAACGCGGTACTCCGGAATACAACATCTcc                                                                   <  1:3772238/93‑1 (MQ=255)

                        acaTGCAANCTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCt                                                                 <  1:5451905/93‑1 (MQ=255)

                         caTGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTg                                                                <  2:5734460/93‑1 (MQ=255)

                         caTGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTg                                                                <  2:150983/93‑1 (MQ=255)

                         caTGCAAACTTCCTGCGCAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTg                                                                <  1:508266/93‑1 (MQ=255)

                          aTGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTgg                                                               <  1:6425742/93‑1 (MQ=255)

                          aTGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTgg                                                               <  1:5827132/93‑1 (MQ=255)

                             cAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTg                                                            >  2:4353404/1‑93 (MQ=255)

                              aaaCTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGa                                                           >  2:4972272/1‑93 (MQ=255)

                              aaaCTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGa                                                           >  2:4645009/1‑93 (MQ=255)

                              aaaCTTCCTGCGTAGCAACCCGTATTACAAAGTCACCGTAGAAGGTAACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGa                                                           >  1:5342424/1‑93 (MQ=255)

                               aaCTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGaa                                                          >  2:4825012/1‑93 (MQ=255)

                               aaCTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGaa                                                          >  1:2892096/1‑93 (MQ=255)

                               aaCTTCCTACGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGaa                                                          >  1:6499281/1‑93 (MQ=255)

                                aCTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAAc                                                         <  1:1471530/93‑1 (MQ=255)

                                aCTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAAc                                                         <  1:2594592/93‑1 (MQ=255)

                                aCTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAAc                                                         >  2:5669447/1‑93 (MQ=255)

                                  ttCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAAcgt                                                       <  1:1244198/93‑1 (MQ=255)

                                  ttCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAAcgt                                                       <  2:610598/93‑1 (MQ=255)

                                  ttCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAAcgt                                                       >  1:5921567/1‑93 (MQ=255)

                                   tCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAAcgtc                                                      >  1:3142522/1‑93 (MQ=255)

                                     cTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAAcgtcgt                                                    <  2:2279003/93‑1 (MQ=255)

                                     cTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAAcgtcgt                                                    <  2:2100174/93‑1 (MQ=255)

                                      tGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTg                                                   <  1:2335722/93‑1 (MQ=255)

                                       gCGTAGCAACCCGTCTTACAAAGTCACCGAAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGc                                                  <  1:3871950/93‑1 (MQ=255)

                                        cGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCg                                                 >  1:1036060/1‑93 (MQ=255)

                                          tAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGaa                                               >  2:1001258/1‑93 (MQ=255)

                                           aGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAAc                                              <  1:6083360/93‑1 (MQ=255)

                                            gCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACg                                             >  2:4681298/1‑93 (MQ=255)

                                             cagcccGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGc                                            <  1:1723192/90‑1 (MQ=255)

                                             cAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGc                                            <  1:6124033/93‑1 (MQ=255)

                                             cAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGc                                            <  2:4416709/93‑1 (MQ=255)

                                              aaCCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGcc                                           <  1:4146573/93‑1 (MQ=255)

                                               aCCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCg                                          >  1:2521261/1‑93 (MQ=255)

                                                 ccGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGtt                                        <  2:4297870/93‑1 (MQ=255)

                                                   gTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGTTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTaa                                      <  2:4755572/93‑1 (MQ=255)

                                                   gTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTaa                                      >  2:1022774/1‑93 (MQ=255)

                                                   gTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTaa                                      <  2:5616085/93‑1 (MQ=255)

                                                    tCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAg                                     >  2:1706369/1‑93 (MQ=255)

                                                       tACAAAGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATg                                  >  2:3651581/1‑93 (MQ=255)

                                                           aaGTCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTAcc                              <  2:4053748/93‑1 (MQ=255)

                                                              tCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGc                           <  1:3103827/93‑1 (MQ=255)

                                                              tCACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGc                           >  2:2805757/1‑93 (MQ=255)

                                                               cACCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCa                          >  2:2967641/1‑93 (MQ=255)

                                                                aCCGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAg                         >  1:3439002/1‑93 (MQ=255)

                                                                 ccGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAgg                        >  2:5197298/1‑93 (MQ=255)

                                                                 ccGTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAgg                        <  1:628524/93‑1 (MQ=255)

                                                                   gTAGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGt                      >  2:1094686/1‑93 (MQ=255)

                                                                     aGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTaa                    >  2:3531606/1‑93 (MQ=255)

                                                                     aGAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCAGCAGGGTaa                    >  1:5316589/1‑93 (MQ=255)

                                                                      gAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTaaa                   <  2:4132637/93‑1 (MQ=255)

                                                                      gAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTaaa                   <  1:2728778/93‑1 (MQ=255)

                                                                      gAAGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTaaa                   <  1:5462473/93‑1 (MQ=255)

                                                                      gAAGGTCACGCGGACGAACGCGGTACTACGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTaaa                   <  2:6215437/93‑1 (MQ=255)

                                                                        aGGTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAgg                 <  1:5120033/93‑1 (MQ=255)

                                                                        aGGTCACGCGGACGAACGCGATACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAgg                 <  1:2032001/93‑1 (MQ=255)

                                                                         ggTCCCGCGGACGAAGGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTCCCTGCAGGGTAAAGGc                <  1:4561222/93‑1 (MQ=255)

                                                                         ggTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGc                >  2:3378473/1‑93 (MQ=255)

                                                                          gTCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGCg               >  1:2255270/1‑93 (MQ=255)

                                                                           tCACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGCGt              >  1:467120/1‑93 (MQ=255)

                                                                            cACGCGGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGCGtt             >  2:820785/1‑93 (MQ=255)

                                                                              cgcgGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGCGTTTc           <  1:881777/93‑1 (MQ=255)

                                                                              cgcgGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGCGTTTc           >  1:3267476/1‑93 (MQ=255)

                                                                               gcgGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGCGTTTCt          <  2:5967721/93‑1 (MQ=255)

                                                                               gcgGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGCGTTTCt          <  2:2540442/93‑1 (MQ=255)

                                                                                cgGACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGCGTTTCTg         >  2:1698927/1‑93 (MQ=255)

                                                                                 ggACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGCGTTTCTGc        >  1:1045826/1‑93 (MQ=255)

                                                                                  gACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGCGTTTCTGCa       <  2:6057376/93‑1 (MQ=255)

                                                                                  gACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGCGTTTCTGCa       <  2:6583385/93‑1 (MQ=255)

                                                                                  gACGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGCGTTTCTGCa       >  2:69329/1‑93 (MQ=255)

                                                                                   aCGAACGCGGTACTCCGGAATACAACATCTCCGTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGGAGGGGAAAGGGGTTTCTGCAg      >  1:1579224/1‑93 (MQ=255)

                                                                                   aCGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGCGTTTCTGCAg      >  1:5597175/1‑93 (MQ=255)

                                                                                    cGAACGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGCGTTTCTGCAGa     >  2:1793139/1‑93 (MQ=255)

                                                                                      aaCGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGCGTTTCTGCAGAcc   >  1:4162676/1‑93 (MQ=255)

                                                                                      aaCGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGCGTTTCTGCAGAcc   <  1:5576486/93‑1 (MQ=255)

                                                                                      aaCGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGCGTTTCTGCAGAcc   >  2:1917500/1‑93 (MQ=255)

                                                                                       aCGCGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGCGTTTCTGCAGACCa  >  2:2395441/1‑93 (MQ=255)

TGACTTCGCTCAAATGCTGGATGCACATGCAAACTTCCTGCGTAGCAACCCGTCTTACAAAGTCACCGTAGAAGGTCACGCGGACGAACGTGGTACTCCGGAATACAACATCTCCCTGGGTGAACGTCGTGCGAACGCCGTTAAGATGTACCTGCAGGGTAAAGGCGTTTCTGCAGACCA  >  NC_000913/778535‑778714

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`