Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 781,490 C→T T61T (ACC→ACT nadA → quinolinate synthetase A protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913781,4900CT83.8% 608.4 / 86.5 223T61T (ACC→ACTnadAquinolinate synthetase A protein
Reads supporting (aligned to +/- strand):  ref base C (19/17);  new base T (91/95);  total (110/113)
Fisher's exact test for biased strand distribution p-value = 7.18e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.68e-01

Only 100 of 226 total aligned reads displayed.

AGAAGATAAAACGTCTGCTAAAAGAACGTAATGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCTTCTACTTTGTTAGTCGCTGGGGTGAGATTTATG  >  NC_000913/781399‑781580
                                                                                           |                                                                                          
  aagaTAAAACGTCTGCTAAAAGAACGTAATGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGt                                                                                         >  2:114718/1‑93 (MQ=255)
   agaTAAAACGTCTGCTAAAAGAACGTAATGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTg                                                                                        >  2:4674/1‑93 (MQ=255)
    gaTAAAACGTCTGCTAAAAGAACGTAATGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACtggtgg                                                                                       >  1:3369846/1‑93 (MQ=255)
      tAAAACGTCTGCTAAAAGAACGTAATGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCt                                                                                     >  2:2369846/1‑93 (MQ=255)
        aaaCGTCTGCTAAAAGAACGTAATGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGt                                                                                   <  2:6584877/93‑1 (MQ=255)
         aaCGTCTGCTAAAAGAACGTAATGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTa                                                                                  >  2:1268389/1‑93 (MQ=255)
          aCGTCTGCTAAAAGAACGTAATGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTAt                                                                                 >  1:354168/1‑93 (MQ=255)
          aCGTCTGCTAAAAGAACGTAATGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTAt                                                                                 <  2:1122652/93‑1 (MQ=255)
          aCGTCTGCTAAAAGAACGTAATGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTAt                                                                                 >  2:5147220/1‑93 (MQ=255)
           cGTCTGCTAAAAGAACGTAATGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTAtt                                                                                <  1:5702627/93‑1 (MQ=255)
            gTCTGCTAAAAGAACGTAATGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTAttt                                                                               >  1:1634867/1‑93 (MQ=255)
             tCTGCTAAAAGAACGTCATGCGGTGATGGGTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGCAACTGGTGGCTGTATTTc                                                                              >  1:1755811/1‑93 (MQ=255)
              cTGCTAAAAGAACGTAATGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCt                                                                             >  2:2676663/1‑93 (MQ=255)
                gccaaaaGAACGTAATGCGTTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGa                                                                           <  2:3014456/90‑1 (MQ=255)
                  tAAAAGAAAGTAATGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGAtt                                                                         >  1:6490890/1‑93 (MQ=255)
                   aaaaGAACGTAATGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATtc                                                                        <  2:4790728/93‑1 (MQ=255)
                    aaaGAACGTAATGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAGCCGGTGGCTGTATTTCTGATtct                                                                       >  1:5042306/1‑93 (MQ=255)
                    aaaGAACGTAATGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATtct                                                                       >  2:5806926/1‑93 (MQ=255)
                     aaGAACGTAATGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATtctc                                                                      <  1:179758/93‑1 (MQ=255)
                     aaGAACGTAATGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATtctc                                                                      <  2:5742675/93‑1 (MQ=255)
                     aaGAACGTAATGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATtctc                                                                      <  2:5824097/93‑1 (MQ=255)
                     aaGAACGTAATGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATtctc                                                                      <  2:33739/93‑1 (MQ=255)
                      aGAACGTAATGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTctct                                                                     >  2:851429/1‑93 (MQ=255)
                      aGAACGTAATGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTctct                                                                     <  1:2172378/93‑1 (MQ=255)
                      aGAACGTAATGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTctct                                                                     <  2:6274270/93‑1 (MQ=255)
                       gAACGTAATGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTg                                                                    >  1:4786188/1‑93 (MQ=255)
                       gAACGTAATGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTg                                                                    >  2:5565774/1‑93 (MQ=255)
                         aCGTAATGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGa                                                                  <  1:2697877/93‑1 (MQ=255)
                         aCGTAATGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGa                                                                  <  2:1884163/93‑1 (MQ=255)
                          cGTAATGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGaa                                                                 <  1:5399777/93‑1 (MQ=255)
                           gTAATGCGGTGATGGTTGCCCACTAATATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGaaa                                                                <  1:3188193/93‑1 (MQ=255)
                            tAATGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAAt                                                               <  1:1030230/93‑1 (MQ=255)
                            tAATGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAAt                                                               >  2:1099857/1‑93 (MQ=255)
                             aaTGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATg                                                              <  2:3729373/93‑1 (MQ=255)
                             aaTGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATg                                                              >  2:4313927/1‑93 (MQ=255)
                             aaTGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATg                                                              <  2:1340690/93‑1 (MQ=255)
                              aTGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATgg                                                             >  1:3794336/1‑93 (MQ=255)
                               tGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGgc                                                            <  1:1558256/93‑1 (MQ=255)
                               tGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGgc                                                            <  1:2305113/93‑1 (MQ=255)
                               tGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGgc                                                            <  1:4875983/93‑1 (MQ=255)
                                gCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGgcg                                                           <  2:6453950/93‑1 (MQ=255)
                                 cGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGgcgc                                                          <  1:4699213/93‑1 (MQ=255)
                                    tGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCt                                                       >  1:4429270/1‑93 (MQ=255)
                                         gTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGt                                                  <  1:461031/93‑1 (MQ=255)
                                         gTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGt                                                  <  1:6100831/93‑1 (MQ=255)
                                         gTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGt                                                  >  1:5911045/1‑93 (MQ=255)
                                         gTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGt                                                  <  1:2441336/93‑1 (MQ=255)
                                         gTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGt                                                  <  1:4438376/93‑1 (MQ=255)
                                           tGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGc                                                <  1:3948913/93‑1 (MQ=255)
                                            gCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCa                                               >  1:3032664/1‑93 (MQ=255)
                                              ccACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCaaa                                             <  1:1058274/93‑1 (MQ=255)
                                               cACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAg                                            <  2:69579/93‑1 (MQ=255)
                                               cACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAg                                            <  2:2252698/93‑1 (MQ=255)
                                                actactATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGc                                           >  2:4409661/1‑93 (MQ=255)
                                                 ctactaTACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCa                                          <  1:1340870/93‑1 (MQ=255)
                                                 ctactaTACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCa                                          <  1:1662810/93‑1 (MQ=255)
                                                 ctactaTACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGCAAATGGCGCGCTTCGGTGGAAAGCa                                          >  2:4734337/1‑93 (MQ=255)
                                                  tactaTACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCAt                                         >  2:4882161/1‑93 (MQ=255)
                                                  tactaTACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCAt                                         >  2:1623781/1‑93 (MQ=255)
                                                    ctaTACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATcc                                       <  1:3170616/93‑1 (MQ=255)
                                                    ctaTACCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATcc                                       <  1:5861895/93‑1 (MQ=255)
                                                     tatgCCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATccc                                      <  1:3152372/93‑1 (MQ=255)
                                                      ataCCGATCCCGAAATTCAACAACTGGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCg                                     <  2:759743/93‑1 (MQ=255)
                                                       taCCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGc                                    <  2:1671575/93‑1 (MQ=255)
                                                       taCCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGc                                    >  1:695313/1‑93 (MQ=255)
                                                        aCCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCt                                   <  1:5488767/93‑1 (MQ=255)
                                                        aCCGATCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCt                                   >  1:5558710/1‑93 (MQ=255)
                                                             tCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCTTCTAc                              <  1:837339/93‑1 (MQ=255)
                                                             tCCCGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCTTCTAc                              >  2:2835083/1‑93 (MQ=255)
                                                               ccGAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCTTCTACtt                            <  1:2236020/93‑1 (MQ=255)
                                                               ccGAAATTCAACAACTGGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCTTCTACtt                            >  2:5653652/1‑93 (MQ=255)
                                                                 gAAATTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCTTCTACTTTg                          >  1:4629235/1‑93 (MQ=255)
                                                                   aaTTCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCTTCTACTTTGtt                        <  1:370138/93‑1 (MQ=255)
                                                                     ttCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCTTCTACTTTGTTAg                      <  1:3357777/93‑1 (MQ=255)
                                                                      tCAACAACTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCTTCTACTTTGTTAGt                     <  1:22772/93‑1 (MQ=255)
                                                                       caacaaCTGGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCTTCTACTTTGTTAGTc                    <  2:3251834/93‑1 (MQ=255)
                                                                        aacaacTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCTTCTACTTTGTTAGTCg                   >  1:1228224/1‑93 (MQ=255)
                                                                         acaacTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCTTCTACTTTGTTAGTCGc                  >  2:1072854/1‑93 (MQ=255)
                                                                           aacTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCTTCTACTTTGTTAGTCGCTg                >  2:4008884/1‑93 (MQ=255)
                                                                            acTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCTTCTACTTTGTTAGTCGCTgg               <  1:2921154/93‑1 (MQ=255)
                                                                            acTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCTTCTACTTTGTTAGTCGCTgg               <  2:6225599/93‑1 (MQ=255)
                                                                             cTGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCTTCTACTTTGTTAGTCGCTggg              >  1:6350912/1‑93 (MQ=255)
                                                                              tGGCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCTTCTACTTTGTTAGTCGCTgggg             <  1:4038393/93‑1 (MQ=255)
                                                                               ggCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCTTCTACTTTGTTAGTCGCTGGGGt            <  2:2143262/93‑1 (MQ=255)
                                                                               ggCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCTTCTACTTTGTTAGTCGCTGGGGt            >  1:4480582/1‑93 (MQ=255)
                                                                               ggCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCTTCTACTTTGTTAGTCGCTGGGGt            >  1:204497/1‑93 (MQ=255)
                                                                               ggCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCTTCTACTTTGTTAGTCGCTGGGGt            <  1:5016053/93‑1 (MQ=255)
                                                                                gCAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCTTCTACTTTGTTAGTCGCTGGGGTg           <  2:5975663/93‑1 (MQ=255)
                                                                                 cAGAAGAAACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCTTCTACTTTGTTAGTCGCTGGGGTga          >  1:6236683/1‑93 (MQ=255)
                                                                                 cAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCTTCTACTTTGTTAGTCGCTGGGGTga          <  2:3580825/93‑1 (MQ=255)
                                                                                   gaagaaACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCTTCTACTTTGTTAGTCGCTGGGGTgaga        >  1:1476079/1‑93 (MQ=255)
                                                                                   gaagaaACCGGTGTCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCTTCTACTTTGTTAGTCGCTGGGGTgaga        <  1:4312919/93‑1 (MQ=255)
                                                                                     agaaACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCTTCTACTTTGTTAGTCGCTGGGGTGAGAtt      >  1:2300401/1‑93 (MQ=255)
                                                                                     agaaACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCTTCTACTTTGTTAGTCGCTGGGGTGAGAtt      >  1:4905475/1‑93 (MQ=255)
                                                                                     agaaACTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCTTCTACTTTGTTAGTCGCTGGGGTGAGAtt      >  1:6653938/1‑93 (MQ=255)
                                                                                       aaaCTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCTTCTACTTTGTTAGTCGCTGGGGTGAGATTTa    >  1:5191249/1‑93 (MQ=255)
                                                                                       aaaCTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCTTCTACTTTGTTAGTCGCTGGGGTGAGATTTa    >  1:2770273/1‑93 (MQ=255)
                                                                                       aaaCTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCTTCTACTTTGTTAGTCGCTGGGGTGAGATTTa    >  1:5822944/1‑93 (MQ=255)
                                                                                        aaCTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCTTCTACTTTGTTAGTCGCTGGGGTGAGATTTAt   <  2:2915081/93‑1 (MQ=255)
                                                                                        aaCTGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCTTCTACTTTGTTAGTCGCTGGGGTGAGATTTAt   >  2:6368452/1‑93 (MQ=255)
                                                                                           |                                                                                          
AGAAGATAAAACGTCTGCTAAAAGAACGTAATGCGGTGATGGTTGCCCACTACTATACCGATCCCGAAATTCAACAACTGGCAGAAGAAACCGGTGGCTGTATTTCTGATTCTCTGGAAATGGCGCGCTTCGGTGCAAAGCATCCCGCTTCTACTTTGTTAGTCGCTGGGGTGAGATTTATG  >  NC_000913/781399‑781580

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: