BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	971,337	A→G	L121L (TTA→TTG)	b0919 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	971,337	0	A	G	84.9%	602.5 / 93.0	239	L121L (TTA→TTG)	b0919	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (17/19); new base G (116/87); total (133/106)
Fisher's exact test for biased strand distribution p-value = 2.81e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.62e-01

Only 100 of 241 total aligned reads displayed.

CTACTGGAGCGGATGCGTGGTGTTTCGGTGGAGGCACCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTACTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAGGAAAATTTCTGGCCCTCATGGTACCGGCAACA  >  NC_000913/971245‑971426

 tACTGGAGCGGATGCGTGGTGTTTCGGTGGAGGCACCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTAc                                                                                          >  2:2988874/1‑93 (MQ=255)

  aCTGGAGCGGATGCGTGGTGTTTCGGTGGAGGCACCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGct                                                                                         <  2:2056048/93‑1 (MQ=255)

   cTGGAGCGGATGCGTGGTGTTTCGGTGGAGGCACCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGctg                                                                                        >  2:558584/1‑93 (MQ=255)

      gAGCGGATGCGTGGTGTTTCGGTGGAGGCACCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGctggcc                                                                                     <  2:261208/93‑1 (MQ=255)

       aGCGGATGCGTGGTGTTTCGGTGGAGGCACCAGCCCGAACACCAGAACGCTGGGAACAACTCTAAGACCAAATCGTTGAAGCCTTGctggcct                                                                                    >  1:6135900/1‑93 (MQ=255)

       aGCGGATGCGTGGTGTTTCGGTGGAGGCACCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGctggcct                                                                                    >  1:3316759/1‑93 (MQ=255)

       aGCGGATGCGTGGTGTTTCGGTGGAGGCACCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGctggcct                                                                                    >  2:3489140/1‑93 (MQ=255)

        gCGGATGCGTGGTGTTTCGGTGGAGGCACCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGctggcctg                                                                                   >  1:797412/1‑93 (MQ=255)

        gCGGATGCGTGGTGTTTCGGTGGAGGCACCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGctggcctg                                                                                   >  2:5682914/1‑93 (MQ=255)

         cGGATGCGTGGTGTTTCGGTGGAGGCACCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGctggcctgg                                                                                  >  1:18589/1‑93 (MQ=255)

          ggATGCGTGGTGTTTCGGTGGAGGCACCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGctggcctggc                                                                                 <  2:4828869/93‑1 (MQ=255)

          ggATGCGTGGTGTTTCGGTGGAGGCACCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGctggcctggc                                                                                 >  2:618225/1‑93 (MQ=255)

           gATGCGTGGTGTTTCGGTGGAGGCACCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCa                                                                                >  1:2525380/1‑93 (MQ=255)

           gATGCGTGGTGTTTCGGTGGAGGCACCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCa                                                                                >  1:6591317/1‑93 (MQ=255)

           gATGCGTGGTGTTTCGGTGGAGGCACCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCa                                                                                >  2:1204553/1‑93 (MQ=255)

           gATGCGTGGTGTTTCGGTGGAGGCACCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCa                                                                                <  1:5431675/93‑1 (MQ=255)

            aTGCGTGGTGTTTCGGTGGAGGCACCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCAc                                                                               >  1:3511960/1‑93 (MQ=255)

            aTGCGTGGTGTTTCGGTGGAGGCACCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTACTGGCCTGGCAc                                                                               >  2:25859/1‑93 (MQ=255)

             tGCGTGGTGTTTCGGTGGAGGCACCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTACTGGCCTGGCAcc                                                                              <  1:5617109/93‑1 (MQ=255)

               cGTGGTGTTTCGGTGGAGGCACCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGt                                                                            <  2:1070028/93‑1 (MQ=255)

               cGTGGTGTTTCGGTGGAGGCACCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGt                                                                            >  1:5212242/1‑93 (MQ=255)

                gtggtgTTTCGGTGGAGGCACCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTc                                                                           >  2:4954413/1‑93 (MQ=255)

                 tggtgTTTCGGTGGAGGCACCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTACTGGCCTGGCACCGTCa                                                                          >  2:2408907/1‑93 (MQ=255)

                  ggtgTTTCGGTGGAGGCACCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAg                                                                         >  2:2208735/1‑93 (MQ=255)

                      tttCGGTGGAGGCACCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACa                                                                     >  2:1757974/1‑93 (MQ=255)

                      tttCGGTGGAGGCACCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACa                                                                     >  2:2657767/1‑93 (MQ=255)

                       ttCGGTGGAGGCACCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAg                                                                    <  1:672821/93‑1 (MQ=255)

                        tCGGTGGAGGCACCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTACTGGCCTGGCACCGTCAGGACAGt                                                                   >  1:4562324/1‑93 (MQ=255)

                         cGGTGGAGGCACCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTc                                                                  >  1:4860586/1‑93 (MQ=255)

                           gTGGAGGCACCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTcgc                                                                >  2:2086701/1‑93 (MQ=255)

                           gTGGAGGCACCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTcgc                                                                <  2:3299796/93‑1 (MQ=255)

                            tGGAGGCACCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTcgcg                                                               >  2:1530474/1‑93 (MQ=255)

                              gAGGCACCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGt                                                             <  2:3552742/93‑1 (MQ=255)

                                   aCCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGt                                                        >  2:2789006/1‑93 (MQ=255)

                                   aCCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTACTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGt                                                        <  1:6310572/93‑1 (MQ=255)

                                     cAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCg                                                      >  2:645275/1‑93 (MQ=255)

                                       gCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGgc                                                    >  1:1810019/1‑93 (MQ=255)

                                       gCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGgc                                                    <  2:6260321/93‑1 (MQ=255)

                                        cccGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGgcg                                                   >  1:2045859/1‑93 (MQ=255)

                                         ccGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGgcgc                                                  >  2:2200792/1‑93 (MQ=255)

                                         ccGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTACTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGgcgc                                                  <  1:3389994/93‑1 (MQ=255)

                                          cGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGcgcg                                                 >  1:2446352/1‑93 (MQ=255)

                                          cGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGcgcg                                                 >  1:3548025/1‑93 (MQ=255)

                                           gAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCgg                                                <  2:3101090/93‑1 (MQ=255)

                                           gAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCgg                                                <  1:5146309/93‑1 (MQ=255)

                                           gAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCgg                                                <  2:1685868/93‑1 (MQ=255)

                                           gAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGCTGCGTCGGCGCgg                                                >  1:5750774/1‑93 (MQ=255)

                                            aaCACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCggc                                               >  2:5062143/1‑92 (MQ=255)

                                            aaCACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGt                                               >  2:3964362/1‑93 (MQ=255)

                                            aaCACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGt                                               <  2:4930388/93‑1 (MQ=255)

                                            aaCACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGt                                               <  1:3887870/93‑1 (MQ=255)

                                            aaCACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTACTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCggc                                               >  2:2878550/1‑92 (MQ=255)

                                             acacCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTACTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTc                                              <  2:3586829/93‑1 (MQ=255)

                                               acCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGa                                            <  1:2165236/93‑1 (MQ=255)

                                               acCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTACTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGa                                            <  2:4583283/93‑1 (MQ=255)

                                                ccAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGAc                                           >  1:4027261/1‑93 (MQ=255)

                                                 cAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACa                                          >  2:5754847/1‑93 (MQ=255)

                                                   gAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAAt                                        >  2:5444062/1‑93 (MQ=255)

                                                       gCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTc                                    <  2:758068/93‑1 (MQ=255)

                                                        cTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCa                                   >  2:6590032/1‑93 (MQ=255)

                                                         tGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAg                                  <  2:844973/93‑1 (MQ=255)

                                                         tGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAg                                  >  1:4441695/1‑93 (MQ=255)

                                                         tGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAg                                  <  1:5717808/93‑1 (MQ=255)

                                                         tGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGCTGCGTCGGCGCGGTCGACAATACTCAg                                  >  1:296683/1‑93 (MQ=255)

                                                          gggAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAgg                                 >  2:1919985/1‑93 (MQ=255)

                                                          gggAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAgg                                 >  1:5546388/1‑93 (MQ=255)

                                                           ggAACAACTCATAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAGGa                                >  1:862476/1‑93 (MQ=255)

                                                           ggAACAACTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAGGa                                <  1:2990228/93‑1 (MQ=255)

                                                                aacTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGGCGACAATACTCAGGAAAAtt                           >  2:3452194/1‑93 (MQ=255)

                                                                 acTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAGGAAAAttt                          <  2:4056801/93‑1 (MQ=255)

                                                                 acTCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAGGAAAAttt                          <  2:5327229/93‑1 (MQ=255)

                                                                   tCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAGGAAAATTTCt                        >  1:1354844/1‑93 (MQ=255)

                                                                   tCAAAGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAGGAAAATTTCt                        >  1:3182931/1‑93 (MQ=255)

                                                                   tCAAAGACCAAATCGTTGAAGCCTTACTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAGGAAAATTTCt                        <  1:1480957/93‑1 (MQ=255)

                                                                     aaaGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAGGAAAATTTCTgg                      >  1:6335956/1‑93 (MQ=255)

                                                                     aaaGACCAAATCGTTGAAGCCTTACTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAGGAAAATTTCTgg                      >  1:375996/1‑93 (MQ=255)

                                                                      aaGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAGGAAAATTTCTGGc                     >  2:5296326/1‑93 (MQ=255)

                                                                      aaGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAGGAAAATTTCTGGc                     >  2:5929571/1‑93 (MQ=255)

                                                                       aGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAGGAAAATTTCTGGcc                    >  2:2665484/1‑93 (MQ=255)

                                                                       aGACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAGGAAAATTTCTGGcc                    >  1:4934741/1‑93 (MQ=255)

                                                                        gACCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAGGAAAATTTCTGGccc                   >  2:4415580/1‑93 (MQ=255)

                                                                        gACCAAATCGTTGAAGCCTTACTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAGGAAAATTTCTGGccc                   >  1:1212665/1‑93 (MQ=255)

                                                                         aCCAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAGGAAAATTTCTGGCCCt                  >  2:2164284/1‑93 (MQ=255)

                                                                           cAAATCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAGGAAAATTTCTGGCCCTCa                <  1:1277590/93‑1 (MQ=255)

                                                                            aaaTGGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAGGAAAATTTCTGGCCCTCAt               >  1:4406637/1‑93 (MQ=255)

                                                                            aaaTCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAGGAAAATTTCTGGCCCTCAt               >  2:138200/1‑93 (MQ=255)

                                                                             aaTCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAGGAAAATTTCTGGCCCTCATg              <  2:4799074/93‑1 (MQ=255)

                                                                             aaTCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAGGAAAATTTCTGGCCCTCATg              <  1:2234978/93‑1 (MQ=255)

                                                                              aTCGTTGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAGGAAAATTTCTGGCCCTCATgg             >  1:2885694/1‑93 (MQ=255)

                                                                                cGTTGAAGCCTTACTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAGGAAAATTTCTGGCCCTCATGGTa           >  2:5546767/1‑93 (MQ=255)

                                                                                  ttGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAGGAAAATTTCTGGCCCTCATGGTAcc         >  2:3846450/1‑93 (MQ=255)

                                                                                  ttGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAGGAAAATTTCTGGCCCTCATGGTAcc         >  1:4160512/1‑93 (MQ=255)

                                                                                  ttGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAGGAAAATTTCTGGCCCTCATGGTAcc         <  2:431361/93‑1 (MQ=255)

                                                                                   tGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAGGAAAATTTCTGGCCCTCATGGTACCg        <  1:5346933/93‑1 (MQ=255)

                                                                                   tGAAGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAGGAAAATTTCTGGCCCTCATGGTACCg        <  2:2308006/93‑1 (MQ=255)

                                                                                      aGCCTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAGGAAAATTTCTGGCCCTCATGGTACCGGCa     >  1:1885859/1‑93 (MQ=255)

                                                                                         cTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAGGAAAATTTCTGGCCCTCATGGTAGCGGCAACa  >  2:1161977/1‑93 (MQ=255)

                                                                                         cTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAGGAAAATTTCTGGCCCTCATGGTACCGGCAACa  >  2:3256742/1‑93 (MQ=255)

                                                                                         cTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAGGAAAATTTCTGGCCCTCATGGTACCGGCAACa  >  2:4033013/1‑93 (MQ=255)

                                                                                         cTTGCTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAGGAAAATTTCTGGCCCTCATGGTACCGGCAACa  <  2:4202044/93‑1 (MQ=255)

CTACTGGAGCGGATGCGTGGTGTTTCGGTGGAGGCACCAGCCCGAACACCAGAACGCTGGGAACAACTCAAAGACCAAATCGTTGAAGCCTTACTGGCCTGGCACCGTCAGGACAGTCGCGGTTGCGTCGGCGCGGTCGACAATACTCAGGAAAATTTCTGGCCCTCATGGTACCGGCAACA  >  NC_000913/971245‑971426

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`