BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,251,414	G→A	A379T (GCA→ACA)	b1201 →	putative sensor‑type regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,251,414	0	G	A	100.0%	837.9 / NA	215	A379T (GCA→ACA)	b1201	putative sensor‑type regulator
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (114/101); total (114/101)

Only 100 of 221 total aligned reads displayed.

CGCAGTAGCTTTCCTGTCCTGCTTTGTGGAGAAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTGCAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGGAAGAATTTATTGGTGGCGATCGCACGGACAATGA  >  NC_000913/1251324‑1251502

cgcAGTAGCTTTCCTGTCCTGCTTTGTGGAGAAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACa                                                                                        <  2:2568658/93‑1 (MQ=255)

 gcAGTAGCTTTCCTGTCCTGCTTTGTGGAGAAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAg                                                                                       <  1:1325499/93‑1 (MQ=255)

 gcAGTAGCTTTCCTGTCCTGCTTTGTGGAGAAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAg                                                                                       <  1:2495322/93‑1 (MQ=255)

   aGTAGCTTTCCTGTCCTGCTTTGTGGAGAAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGt                                                                                     <  2:5867254/93‑1 (MQ=255)

   aGTAGCTTTCCTGTCCTGCTTTGTGGAGAAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGt                                                                                     <  2:3176407/93‑1 (MQ=255)

    gTAGCTTTCCTGTCCTGCTTTGTGGAGAAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTc                                                                                    >  2:4743068/1‑93 (MQ=255)

      aGCTTTCCTGTCCTGCTTTGTGGAGAAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCt                                                                                  <  1:3813144/93‑1 (MQ=255)

        cTTTCCTGTCCTGCTTTGTGGAGAAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTta                                                                                >  2:2423537/1‑93 (MQ=255)

        cTTTCCTGTCCTGCTTTGTGGAGAAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTta                                                                                >  1:5204696/1‑93 (MQ=255)

         tttCCTGTCCTGCTTTGTGGAGAAGAGGGGGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTtat                                                                               >  1:5964526/1‑93 (MQ=255)

         tttCCTGTCCTGCTTTGTGGAGAAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTtat                                                                               >  2:6358113/1‑93 (MQ=255)

         tttCCTGTCCTGCTTTGTGGAGAAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTtat                                                                               <  2:5480615/93‑1 (MQ=255)

          ttCCTGTCCTGCTTTGTGGAGAAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTtata                                                                              <  1:203313/93‑1 (MQ=255)

          ttCCTGTCCTGCTTTGTGGAGAAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTtata                                                                              >  1:5645241/1‑93 (MQ=255)

           tcctgtcctgCTTTGTGGAGAAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTatat                                                                             <  1:4482335/93‑1 (MQ=255)

            cctgtcctgCTTTGTGGAGAAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATc                                                                            >  1:241006/1‑93 (MQ=255)

            cctgtcctgCTTTGTGGAGAAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATc                                                                            >  1:3200640/1‑93 (MQ=255)

             ctgtcctgCTTTGTGGAGAAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCg                                                                           >  1:91214/1‑93 (MQ=255)

             ctgtcctgCTTTGTGGAGAAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCg                                                                           >  2:364382/1‑93 (MQ=255)

              tgtcctgCTTTGTGGAGAAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGc                                                                          <  1:4214064/93‑1 (MQ=255)

              tgtcctgCTTTGTGGAGAAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGc                                                                          <  1:3653616/93‑1 (MQ=255)

               gtcctgCTTTGTGGAGAAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGcc                                                                         <  2:1141139/93‑1 (MQ=255)

                tcctgCTTTGTGGAGAAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCg                                                                        >  2:3517686/1‑93 (MQ=255)

                   tgCTTTGTGGAGAAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCa                                                                     <  1:5328533/93‑1 (MQ=255)

                   tgCTTTGTGGAGAAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCa                                                                     >  2:1795356/1‑93 (MQ=255)

                    gCTTTGTGGAGAAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCaa                                                                    >  2:3113377/1‑93 (MQ=255)

                      tttGTGGAGAAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAAtt                                                                  <  1:4649493/93‑1 (MQ=255)

                         gtgGAGAAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATtgtg                                                               >  2:6509850/1‑93 (MQ=255)

                         gtgGAGAAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATtgtg                                                               >  2:1354576/1‑93 (MQ=255)

                          tgGAGAAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGa                                                              >  1:5267270/1‑93 (MQ=255)

                          tgGAGAAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGa                                                              <  2:2245851/93‑1 (MQ=255)

                           ggAGAAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAg                                                             <  1:3957194/93‑1 (MQ=255)

                           ggAGAAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAg                                                             <  1:3005779/93‑1 (MQ=255)

                           ggAGAAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAg                                                             >  2:2060291/1‑93 (MQ=255)

                            gagaAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGt                                                            <  1:2222258/93‑1 (MQ=255)

                              gaagaGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTta                                                          >  2:2837569/1‑93 (MQ=255)

                                agagGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTtata                                                        >  1:553363/1‑93 (MQ=255)

                                 gagGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTatat                                                       <  1:3317128/93‑1 (MQ=255)

                                       gTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGAt                                                 <  2:5997876/93‑1 (MQ=255)

                                       gTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGAt                                                 <  1:2066051/93‑1 (MQ=255)

                                         gggCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGAtgc                                               <  1:3470719/93‑1 (MQ=255)

                                          ggCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGAtgct                                              <  2:3436801/93‑1 (MQ=255)

                                          ggCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGAtgct                                              <  1:6245067/93‑1 (MQ=255)

                                          ggCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGAtgct                                              <  2:5712505/93‑1 (MQ=255)

                                             aaGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTgcg                                           >  1:155596/1‑93 (MQ=255)

                                             aaGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTgcg                                           >  1:3750220/1‑93 (MQ=255)

                                             aaGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTgcg                                           >  2:3250630/1‑93 (MQ=255)

                                              aGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTgcgc                                          >  2:5163127/1‑93 (MQ=255)

                                              aGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTgcgc                                          >  1:11025/1‑93 (MQ=255)

                                              aGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTgcgc                                          <  2:4101584/93‑1 (MQ=255)

                                              aGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCATTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTgcgc                                          >  1:6340629/1‑93 (MQ=255)

                                               ggCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCt                                         <  2:3313130/93‑1 (MQ=255)

                                               ggCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCt                                         >  1:3086347/1‑93 (MQ=255)

                                               ggCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCt                                         >  2:2723489/1‑93 (MQ=255)

                                                 cACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTgg                                       >  1:54631/1‑93 (MQ=255)

                                                 cACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATACCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTgg                                       <  2:4380515/93‑1 (MQ=255)

                                                  aCTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGc                                      <  1:315106/93‑1 (MQ=255)

                                                  aCTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGc                                      >  2:3873495/1‑93 (MQ=255)

                                                   cTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCg                                     <  2:5235252/93‑1 (MQ=255)

                                                    tGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCgg                                    >  1:267196/1‑93 (MQ=255)

                                                     gCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGga                                   >  1:1241084/1‑93 (MQ=255)

                                                     gCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGga                                   >  1:2856180/1‑93 (MQ=255)

                                                      cTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGgaa                                  >  2:1299886/1‑93 (MQ=255)

                                                      cTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGgaa                                  <  1:2700273/93‑1 (MQ=255)

                                                       tAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGgaag                                 >  1:4093849/1‑93 (MQ=255)

                                                       tAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGgaag                                 >  1:1896075/1‑93 (MQ=255)

                                                        aaGTCAGGCACTTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGgaaga                                >  1:3633691/1‑93 (MQ=255)

                                                        aaGTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGgaaga                                <  2:2649451/93‑1 (MQ=255)

                                                          gTCAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGGAAGAAt                              >  2:1627996/1‑93 (MQ=255)

                                                            cAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGGAAGAAttt                            <  1:6582542/93‑1 (MQ=255)

                                                            cAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGGAAGAAttt                            >  2:6177008/1‑93 (MQ=255)

                                                            cAGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGGAAGAAttt                            >  2:3448843/1‑93 (MQ=255)

                                                             aGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGGAAGAATTTa                           <  1:4854169/93‑1 (MQ=255)

                                                             aGGCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGGAAGAATTTa                           >  1:4885853/1‑93 (MQ=255)

                                                               gCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGGTAGAATTTAtt                         <  2:3031007/93‑1 (MQ=255)

                                                               gCAATTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGGAAGAATTTAtt                         <  1:5676375/93‑1 (MQ=255)

                                                                  aTTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGGAAGAATTTATtggt                      >  2:6057666/1‑93 (MQ=255)

                                                                  aTTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGGAAGAATTTATtggt                      >  1:4950178/1‑93 (MQ=255)

                                                                  aTTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGGAAGAATTTATtggt                      <  2:3675802/93‑1 (MQ=255)

                                                                  aTTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGGAAGAATTTATtggt                      <  2:1687414/93‑1 (MQ=255)

                                                                  aTTCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGCGATGCTGCCCTGGCGGAAGAATTTATtggt                      >  1:4045225/1‑93 (MQ=255)

                                                                   ttCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGGAAGAATTTATtggtg                     <  1:1442408/93‑1 (MQ=255)

                                                                   ttCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGGAAGAATTTATtggtg                     <  1:6599370/93‑1 (MQ=255)

                                                                    tCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGGAAGAATTTATtggtgg                    >  1:5133446/1‑93 (MQ=255)

                                                                    tCATAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGCGAGTTATATGGTGATGCTGCGCTGGCGGAAGAATTTATtggtgg                    >  1:5060521/1‑93 (MQ=255)

                                                                      aTAATGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGGAAGAATTTATTGGTGGCg                  <  2:2986171/93‑1 (MQ=255)

                                                                        aaTGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGGAAGAATTTATTGGTGGCGAt                >  2:3407926/1‑93 (MQ=255)

                                                                         aTGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGGAAGAATTTATTGGTGGCGATc               <  1:5428139/93‑1 (MQ=255)

                                                                          tGAAAGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGGAAGAATTTATTGGTGGCGATCg              >  1:420148/1‑93 (MQ=255)

                                                                             aaGCGAGCGTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGGAAGAATTTATTGGTGGCGATCGCAc           <  1:4310251/93‑1 (MQ=255)

                                                                              agcgagcgTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGGAAGAATTTATTGGTGGCGATCGCACg          <  2:5521395/93‑1 (MQ=255)

                                                                              agcgagcgTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGGAAGAATTTATTGGTGGCGATCGCACg          >  2:636497/1‑93 (MQ=255)

                                                                              agcgagcgTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGGAAGAATTTATTGGTGGCGATAGCACg          >  2:6634394/1‑93 (MQ=255)

                                                                                  agcgTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGGAAGAATTTATTGGTGGCGATCGCACGGACa      >  2:1174840/1‑93 (MQ=255)

                                                                                   gcgTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGGAAGAATTTATTGGTGGCGATCGCACGGACaa     <  1:6279443/93‑1 (MQ=255)

                                                                                   gcgTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGGAAGAATTTATTGGTGGCGATCGCACGGACaa     >  2:3193638/1‑93 (MQ=255)

                                                                                    cgTGCTACAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGGAAGAATTTATTGGTGGCGATCGCACGGACAAt    >  2:1251935/1‑93 (MQ=255)

                                                                                      tgctacAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGGAAGAATTTATTGGTGGCGATCGCACGGACAATGa  <  1:3380108/93‑1 (MQ=255)

                                                                                      tgctacAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGGAAGAATTTATTGGTGGCGATCGCACGGACAATGa  >  2:1099703/1‑93 (MQ=255)

                                                                                      tgctacAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGGAAGAATTTATTGGTGGCGATCGCACGGACAATGa  >  1:1865345/1‑93 (MQ=255)

CGCAGTAGCTTTCCTGTCCTGCTTTGTGGAGAAGAGGGCGTGGGCAAGGCACTGCTAAGTCAGGCAATTCATAATGAAAGCGAGCGTGCTGCAGGTCCTTATATCGCCGTCAATTGTGAGTTATATGGTGATGCTGCGCTGGCGGAAGAATTTATTGGTGGCGATCGCACGGACAATGA  >  NC_000913/1251324‑1251502

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`