Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,290,621 T→C intergenic (+143/‑59) hnr → / → galU Hnr/glucose‑1‑phosphate uridylyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,290,6210TC87.7% 609.9 / 69.3 219intergenic (+143/‑59)hnr/galUHnr/glucose‑1‑phosphate uridylyltransferase
Reads supporting (aligned to +/- strand):  ref base T (13/14);  new base C (105/87);  total (118/101)
Fisher's exact test for biased strand distribution p-value = 5.43e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.29e-01

Only 100 of 223 total aligned reads displayed.

TACTATCGTCGCCATTCGTATAAGTAATTGTCTTAATTATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACTGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAATGGCTGCCATTAATACGAAAGTCAAAAAAG  >  NC_000913/1290531‑1290710
                                                                                          |                                                                                         
  cTATCGTCGCCATTCGTATAAGTAATTGTCTTAATTATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGa                                                                                       <  2:5752285/93‑1 (MQ=255)
  cTATCGTCGCCATTCGTATAAGTAATTGTCTTAATTATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGa                                                                                       >  1:2539308/1‑93 (MQ=255)
   tATCGTCGCCATTCGTATAAGTAATTGTCTTAATTATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACTGGGAt                                                                                      <  1:4161073/93‑1 (MQ=255)
   tATCGTCGCCATTCGTATAAGTAATTGTCTTAATTATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGAt                                                                                      >  2:1695974/1‑93 (MQ=255)
   tATCGTCGCCATTCGTATAAGTAATTGTCTTAATTATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGAt                                                                                      >  1:330313/1‑93 (MQ=255)
    aTCGTCGCCATTCGTATAAGTAATTGTCTTAATTATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATg                                                                                     <  1:5226545/93‑1 (MQ=255)
    aTCGTCGCCATTCGTATAAGTAATTGTCTTAATTATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATg                                                                                     >  1:1480962/1‑93 (MQ=255)
      cgtcgCCATTCGTATAAGTAATTGTCTTAATTATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACTGGGATGCg                                                                                   <  2:4306285/93‑1 (MQ=255)
        tcgCCATTCGTATAAGTAATTGTCTTAATTATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGAt                                                                                 >  1:2639774/1‑93 (MQ=255)
             aTTCGTATAAGTAATTGTCTTAATTATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGa                                                                            >  2:3721685/1‑93 (MQ=255)
             aTTCGTATAAGTAATTGTCTTAATTATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGa                                                                            >  2:2744452/1‑93 (MQ=255)
               tCGTATAAGTAATTGTCTTAATTATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGaaa                                                                          <  1:3970205/93‑1 (MQ=255)
                cGTATAAGTAATTGTCTTAATTATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAat                                                                         >  2:6107924/1‑93 (MQ=255)
                 gTATAAGTAATTGTCTTAATTATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACTGGGATGCGATACAGAAata                                                                        >  1:1537045/1‑93 (MQ=255)
                 gTATAAGTAATTGTCTTAATTATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAata                                                                        <  1:6427968/93‑1 (MQ=255)
                  tataAGTAATTGTCTTAATTATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAatat                                                                       <  2:2103495/93‑1 (MQ=255)
                    taAGTAATTGTCTTAATTATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGa                                                                     >  1:1886035/1‑93 (MQ=255)
                    taAGTAATTGTCTTAATTATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGa                                                                     >  1:5949643/1‑93 (MQ=255)
                     aaGTAATTGTCTTAATTATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGaa                                                                    <  2:3000768/93‑1 (MQ=255)
                     aaGTAATTGTCTTAATTATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGaa                                                                    <  2:1557656/93‑1 (MQ=255)
                      aGTAATTGTCTTAATTATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAac                                                                   >  1:2101265/1‑93 (MQ=255)
                      aGTAATTGTCTTAATTATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAac                                                                   >  1:646955/1‑93 (MQ=255)
                      aGTAATTGTCTTAATTATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAac                                                                   <  2:829272/93‑1 (MQ=255)
                      aGTAATTGTCTTAATTATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAac                                                                   >  2:70109/1‑93 (MQ=255)
                      aGTAATTGTCTTAATTATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAac                                                                   >  1:2714506/1‑93 (MQ=255)
                      aGTAATTGTCTTAATTATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAac                                                                   >  2:6144507/1‑93 (MQ=255)
                              tCTTAATTATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCaa                                                           <  2:3635749/93‑1 (MQ=255)
                              tCTTAATTATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCaa                                                           >  2:1499132/1‑93 (MQ=255)
                              tCTTAATTATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCaa                                                           >  1:480531/1‑93 (MQ=255)
                                ttAATTATGCTAACTCGCTTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCaaaa                                                         <  1:5667997/93‑1 (MQ=255)
                                ttAATTATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACTGGGATGCGATACAGAAATATGAACACGTTCaaaa                                                         <  2:5645927/93‑1 (MQ=255)
                                ttAATTATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCaaaa                                                         >  2:2374836/1‑93 (MQ=255)
                                 tAATTATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAac                                                        <  1:1666969/93‑1 (MQ=255)
                                   aTTATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAacac                                                      <  1:432209/93‑1 (MQ=255)
                                    ttATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACg                                                     >  2:4907469/1‑93 (MQ=255)
                                    ttATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACg                                                     >  1:876647/1‑93 (MQ=255)
                                     tATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGa                                                    >  1:5062146/1‑93 (MQ=255)
                                     tATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGa                                                    >  2:6234873/1‑93 (MQ=255)
                                      aTGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGaa                                                   <  2:5113623/93‑1 (MQ=255)
                                       tGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAAc                                                  <  1:4488204/93‑1 (MQ=255)
                                       tGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAAc                                                  >  2:386142/1‑93 (MQ=255)
                                       tGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAAc                                                  >  2:4296180/1‑93 (MQ=255)
                                        gCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACa                                                 >  2:4055079/1‑93 (MQ=255)
                                         cTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAg                                                <  1:5159911/93‑1 (MQ=255)
                                          tAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGt                                               <  1:4979000/93‑1 (MQ=255)
                                           aaCTCGCCTCCTTTTCAGAACTTAGCCCCTGCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTc                                              <  1:6528147/93‑1 (MQ=255)
                                            aCTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTcc                                             <  2:4428009/93‑1 (MQ=255)
                                              tCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAg                                           >  2:2026596/1‑93 (MQ=255)
                                              tCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAg                                           >  2:3362165/1‑93 (MQ=255)
                                               cGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAgg                                          <  1:410289/93‑1 (MQ=255)
                                               cGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAgg                                          <  1:980179/93‑1 (MQ=255)
                                                gCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAggg                                         >  1:4862517/1‑92 (MQ=255)
                                                gCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGga                                         <  2:5918300/93‑1 (MQ=255)
                                                 cctcctTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGgag                                        >  2:4183803/1‑93 (MQ=255)
                                                  ctcctTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGgaga                                       >  2:241636/1‑93 (MQ=255)
                                                   tcctTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACTGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGaa                                      >  2:2674823/1‑93 (MQ=255)
                                                   tcctTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGaa                                      >  1:440781/1‑93 (MQ=255)
                                                    cctTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAAt                                     <  1:4182529/93‑1 (MQ=255)
                                                     ctTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAAtt                                    >  2:3162058/1‑93 (MQ=255)
                                                     ctTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAAtt                                    >  2:6060677/1‑93 (MQ=255)
                                                      ttttCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAAttt                                   >  2:5245914/1‑93 (MQ=255)
                                                       tttCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTa                                  >  1:5503576/1‑93 (MQ=255)
                                                         tCAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTaaa                                <  1:2224148/93‑1 (MQ=255)
                                                          cAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAAt                               <  2:3823894/93‑1 (MQ=255)
                                                          cAGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAAt                               >  1:5272634/1‑93 (MQ=255)
                                                           aGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAATg                              >  2:2389479/1‑93 (MQ=255)
                                                           aGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAATg                              >  2:47055/1‑93 (MQ=255)
                                                           aGAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAATg                              >  1:4645158/1‑93 (MQ=255)
                                                            gAACTTAGCCCCTTCGGGGTGCTGATATACTGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAATgg                             >  2:5195703/1‑93 (MQ=255)
                                                            gAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAATgg                             <  1:1364405/93‑1 (MQ=255)
                                                            gAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAATgg                             >  2:2928156/1‑93 (MQ=255)
                                                            gAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAATgg                             >  2:3271405/1‑93 (MQ=255)
                                                            gAACTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAATgg                             >  2:107728/1‑93 (MQ=255)
                                                             aaCTTAGCCCCTTCGGGGTGCTGATATACTGGGATGCGATACAGAATTATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAATGGc                            <  1:1316867/93‑1 (MQ=255)
                                                             aaCTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAATGGc                            <  1:3637552/93‑1 (MQ=255)
                                                             aaCTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAATGGc                            >  1:3762812/1‑93 (MQ=255)
                                                             aaCTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAATGGc                            >  2:3245044/1‑93 (MQ=255)
                                                               cTTAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAATGGCTg                          <  2:4138053/93‑1 (MQ=255)
                                                                 tAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAATGGCTGcc                        >  1:1018667/1‑93 (MQ=255)
                                                                 tAGCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAATGGCTGcc                        >  1:3018574/1‑93 (MQ=255)
                                                                  aGCCCCTTCGGGGTGCTGATATACTGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAATGGCTGCCa                       >  1:3413935/1‑93 (MQ=255)
                                                                  aGCCCCTTCGGGGTGCTGATATACTGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAATGGCTGCCa                       <  1:75806/93‑1 (MQ=255)
                                                                   gCCCCTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAATGGCTGCCAt                      <  1:5980957/93‑1 (MQ=255)
                                                                     cccTTCGGGGTGCTGATATACTGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAATGGCTGCCATTa                    >  1:5861257/1‑93 (MQ=255)
                                                                      ccTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAATGGCTGCCATTaa                   <  2:2305450/93‑1 (MQ=255)
                                                                       cTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAATGGCTGCCATTAAt                  >  2:2458734/1‑93 (MQ=255)
                                                                       cTTCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAATGGCTGCCATTAAt                  <  2:1891170/93‑1 (MQ=255)
                                                                        ttCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAATGGCTGCCATTAATa                 <  1:6585475/93‑1 (MQ=255)
                                                                        ttCGGGGTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAATGGCTGCCATTAATa                 >  2:5473409/1‑93 (MQ=255)
                                                                            gggTGCTGATATACTGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAATGGCTGCCATTAATACGaa             >  2:1373018/1‑93 (MQ=255)
                                                                              gTGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAATGGCTGCCATTAATACGAAAg           >  2:5507432/1‑93 (MQ=255)
                                                                               tGCTGATATACTGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAATGGCTGCCATTAATACGAAAGt          <  2:626606/93‑1 (MQ=255)
                                                                               tGCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAATGGCTGCCATTAATACGAAAGt          <  1:6200634/93‑1 (MQ=255)
                                                                                gCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAATGGCTGCCATTAATACGAAAGTc         <  2:1390667/93‑1 (MQ=255)
                                                                                gCTGATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAATGGCTGCCATTAATACGAAAGTc         >  2:5061416/1‑93 (MQ=255)
                                                                                   gATATACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAATGGCTGCCATTAATACGAAAGTCaaa      >  2:2556559/1‑93 (MQ=255)
                                                                                    atatACCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAATGGCTGCCATTAATACGAAAGTCaaaa     >  1:455143/1‑93 (MQ=255)
                                                                                     tataCCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAATGGCTGCCATTAATACGAAAGTCaaaaa    >  1:3096489/1‑93 (MQ=255)
                                                                                      ataCCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAATGGCTGCCATTAATACGAAAGTCaaaaaa   <  2:4569644/93‑1 (MQ=255)
                                                                                       taCCGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAATGGCTGCCATTAATACGAAAGTCAAAAAAg  >  2:5663829/1‑93 (MQ=255)
                                                                                          |                                                                                         
TACTATCGTCGCCATTCGTATAAGTAATTGTCTTAATTATGCTAACTCGCCTCCTTTTCAGAACTTAGCCCCTTCGGGGTGCTGATATACTGGGATGCGATACAGAAATATGAACACGTTCAAAACACGAACAGTCCAGGAGAATTTAAATGGCTGCCATTAATACGAAAGTCAAAAAAG  >  NC_000913/1290531‑1290710

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: