| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,957,548 | 1 bp→GG | intergenic (‑117/‑744) | ppiC ← / → rep | peptidyl‑prolyl cis‑trans isomerase C/rep helicase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,957,547 | 1 | . | G | 94.2% | 584.4 / 25.1 | 172 | intergenic (‑116/‑745) | ppiC/rep | peptidyl‑prolyl cis‑trans isomerase C/rep helicase |
| Reads supporting (aligned to +/- strand): ref base . (3/7); new base G (70/92); total (73/99) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.20e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.92e-01 | |||||||||||
| * | NC_000913 | 3,957,548 | 0 | T | G | 98.3% | 607.5 / ‑3.1 | 172 | intergenic (‑117/‑744) | ppiC/rep | peptidyl‑prolyl cis‑trans isomerase C/rep helicase |
| Reads supporting (aligned to +/- strand): ref base T (0/3); new base G (73/96); total (73/99) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.63e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 178 total aligned reads displayed.
AGGCGGCGATTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CC‑T‑G‑‑C‑TCGCA‑GG‑T‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGT > NC_000913/3957458‑3957627 ||| cggcggcGATTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CC‑T‑gg < 1:1897305/92‑2 (MQ=255) tAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CC‑GGG‑‑CTTCGCA‑GG‑T‑cc < 2:3319656/93‑1 (MQ=255) gCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑T‑ccct > 2:4225164/1‑91 (MQ=255) gCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑T‑ccct > 2:5822176/1‑91 (MQ=255) gCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑T‑ccct > 1:650388/1‑91 (MQ=255) gCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCCGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑T‑ccct > 1:323291/1‑91 (MQ=255) gATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAg > 2:1833600/1‑93 (MQ=255) aTCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAgg < 2:3847279/93‑1 (MQ=255) aTCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAgg > 1:2837306/1‑93 (MQ=255) tctgCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAggg < 1:876935/90‑1 (MQ=255) tCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAggg < 1:2572174/93‑1 (MQ=255) tCCGCAGATACTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAggg < 1:6595625/93‑1 (MQ=255) cGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGga < 1:3135246/93‑1 (MQ=255) gCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGgag < 2:2199789/93‑1 (MQ=255) gCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGgag > 2:6262039/1‑93 (MQ=255) cAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGGAAAAGACCGGAAAATACG‑G‑G‑‑CTTCGCA‑GGTT‑CCTCCAGGGgaga > 2:6163289/1‑93 (MQ=255) aGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGaa > 1:5775499/1‑93 (MQ=255) aGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGaa > 2:4070328/1‑93 (MQ=255) aGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCCAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGaa > 1:2263810/1‑93 (MQ=255) aGATCCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGCCAAAACCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGaa < 1:3852484/93‑1 (MQ=255) gATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGGAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGaaa > 2:2896044/1‑93 (MQ=255) gATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGaaa > 1:5547702/1‑93 (MQ=255) gATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGaaa > 1:5733049/1‑93 (MQ=255) gATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGACCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TGCCTCAAGGGGAGaaa > 1:2211306/1‑93 (MQ=255) gATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGGAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGaaa > 2:3532283/1‑93 (MQ=255) aTGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGGCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGG‑C‑CCTCAAGGGGAGaaaa > 2:3897634/1‑93 (MQ=255) tGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAAc > 2:5008172/1‑93 (MQ=255) cTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACtt > 2:634484/1‑93 (MQ=255) cTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACtt < 1:1006674/93‑1 (MQ=255) tAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTa > 1:4575489/1‑93 (MQ=255) aaCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAg > 2:2327016/1‑93 (MQ=255) aCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAgg < 2:3469925/93‑1 (MQ=255) aCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAgg < 1:6607831/93‑1 (MQ=255) aCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CC‑GGG‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAgg < 1:1552228/93‑1 (MQ=255) aCGTAATTGTCAGTCAGGGAGGGGCTGGTACATATTTGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAgg > 2:4970438/1‑93 (MQ=255) cGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CC‑G‑GT‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAggg < 1:2046670/93‑1 (MQ=255) gTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGc > 2:5982183/1‑93 (MQ=255) gTAATGGACGGTCAGGGAGTGGCTGGTACATATATGGCAAAGACCCGGAAAAT‑CC‑G‑GGTT‑TCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGc < 2:2337786/93‑1 (MQ=255) aTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCctc < 1:6150071/93‑1 (MQ=255) tGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTa < 2:252039/93‑1 (MQ=255) tGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTa < 2:4297666/93‑1 (MQ=255) tGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTa < 2:4565961/93‑1 (MQ=255) tcagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATg > 1:3343773/1‑93 (MQ=255) agtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATggg > 2:4352657/1‑93 (MQ=255) gtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGc < 1:410919/93‑1 (MQ=255) gtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGc > 1:1742818/1‑93 (MQ=255) gtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGc > 2:4035532/1‑93 (MQ=255) cagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTa > 1:6577824/1‑93 (MQ=255) agGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGT‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc < 2:2379296/93‑1 (MQ=255) agGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc < 2:6024595/93‑1 (MQ=255) agGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc > 1:5315852/1‑93 (MQ=255) ggAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CC‑GGG‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaa > 2:6578645/1‑93 (MQ=255) gAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaaa < 2:2028580/93‑1 (MQ=255) ggTGGCGTGTACATATATGGCAAAAGCACGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAg < 2:1217518/92‑1 (MQ=255) aGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAg < 2:5423239/93‑1 (MQ=255) tgtcTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTc < 1:452672/90‑1 (MQ=255) tGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTc < 1:3322520/93‑1 (MQ=255) tGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTc < 1:5634565/93‑1 (MQ=255) tGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTc < 1:5971861/93‑1 (MQ=255) ggCTGTTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCa < 1:5760901/93‑1 (MQ=255) ggCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCa < 2:4313549/93‑1 (MQ=255) ggCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCa > 2:3135399/1‑93 (MQ=255) ggCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCa > 1:3500533/1‑93 (MQ=255) gCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAt < 2:821177/93‑1 (MQ=255) gCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAt < 2:480234/93‑1 (MQ=255) cTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAtt > 1:6204728/1‑93 (MQ=255) tGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTa > 2:3362310/1‑93 (MQ=255) ggTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt < 2:2424980/93‑1 (MQ=255) ggTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt < 2:531511/93‑1 (MQ=255) ggTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt < 1:6445970/93‑1 (MQ=255) ggTACATATATGGCAAAAGCCCGGAAAAT‑CC‑GGG‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt > 1:1097349/1‑93 (MQ=255) gTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATc < 1:5535285/93‑1 (MQ=255) gTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATc < 2:6354216/93‑1 (MQ=255) aCATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgg < 2:5802184/93‑1 (MQ=255) aCATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgg < 1:571938/93‑1 (MQ=255) aCATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgg < 2:710739/93‑1 (MQ=255) atatatGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgggg < 2:1635327/93‑1 (MQ=255) atatatGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgggg > 1:1319584/1‑93 (MQ=255) atatatGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgggg < 2:546043/93‑1 (MQ=255) tatatGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGa < 2:3270969/93‑1 (MQ=255) tatatGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGa > 2:3325734/1‑93 (MQ=255) tatatGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGa > 2:3672089/1‑93 (MQ=255) atatGGAAAAGCCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGAt < 2:1176514/93‑1 (MQ=255) tatGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATg > 1:3740304/1‑93 (MQ=255) tatGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATg > 2:3659506/1‑93 (MQ=255) tatGGCAAAAGCCAAGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATg < 1:1038765/93‑1 (MQ=255) tGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGt > 2:5288288/1‑93 (MQ=255) gCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGtta > 2:1365046/1‑93 (MQ=255) gCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGtta < 1:6243739/93‑1 (MQ=255) aaaaGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatt > 1:5208032/1‑93 (MQ=255) aaaGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattt < 2:1696983/93‑1 (MQ=255) aGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatttta < 2:1537819/93‑1 (MQ=255) gCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttat < 2:3820092/93‑1 (MQ=255) gCCCGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttat < 1:1461317/93‑1 (MQ=255) cccGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttatt < 2:5189173/93‑1 (MQ=255) ccGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg > 2:2736385/1‑93 (MQ=255) ccGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg > 2:1126912/1‑93 (MQ=255) ccGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg > 1:5105805/1‑93 (MQ=255) cGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGt < 1:4403764/93‑1 (MQ=255) cGGAAAAT‑CCGG‑G‑‑CTTCGCA‑GG‑TCCCTCAAGGGGAGAAAACTTAGGCCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGt > 2:6219200/1‑93 (MQ=255) ||| AGGCGGCGATTTTAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CC‑T‑G‑‑C‑TCGCA‑GG‑T‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGT > NC_000913/3957458‑3957627 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |