| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,778,658 | (C)5→4 | intergenic (+14/‑184) | lldD → / → yibK | L‑lactate dehydrogenase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,778,654 | 0 | C | . | 96.4% | 680.3 / 15.9 | 167 | intergenic (+10/‑188) | lldD/yibK | L‑lactate dehydrogenase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (6/0); new base . (6/153); total (13/154) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.61e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01 | |||||||||||
Only 100 of 205 total aligned reads displayed.
TTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTT > NC_000913/3778562‑3778745 | tACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGcc > 2:6200590/1‑93 (MQ=255) agCATGATTGGCTGGTCATGGGGCTGGGTAAAGTGTTGGCTGCGGCAGTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGcccc < 1:6823894/92‑1 (MQ=255) gCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGcgccc > 2:4232858/1‑93 (MQ=255) cAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGcccctc < 1:5174157/93‑3 (MQ=255) cAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGccccgc > 2:4879517/1‑91 (MQ=255) cAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGcccccc > 1:2389978/1‑92 (MQ=255) aaGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGccccccc > 2:7593661/1‑91 (MQ=255) gATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCAcc < 1:7654175/93‑1 (MQ=255) ttCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCcccccccccc > 2:8345672/1‑93 (MQ=255) cGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCcccccccccccc > 1:545043/1‑91 (MQ=255) gCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGGccccccccccccc > 1:5655153/1‑90 (MQ=255) cTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGGccccccccccccac > 1:896369/1‑89 (MQ=255) cTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAAcc < 2:32054/93‑1 (MQ=255) cTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAAcc < 2:639340/93‑1 (MQ=255) tGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAAccc < 1:6830852/93‑1 (MQ=255) tGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAAccc < 1:408764/93‑1 (MQ=255) tGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAAccc < 1:2851245/93‑1 (MQ=255) ggTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCct < 1:978972/93‑1 (MQ=255) ggTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCct < 2:5351942/93‑1 (MQ=255) gTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAAacccc > 1:1706251/1‑91 (MQ=255) gTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCctc < 2:5452370/93‑1 (MQ=255) gCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCtctc < 1:8034700/93‑1 (MQ=255) gCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCtctc < 2:6973829/93‑1 (MQ=255) gCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCtctc < 2:65654/93‑1 (MQ=255) aGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTccc < 1:2143053/93‑1 (MQ=255) aGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTccc < 1:7945277/93‑1 (MQ=255) aGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTccc < 1:9991056/93‑1 (MQ=255) ggggCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCC‑CCCCCCCACCCCCTcccc > 1:2974168/1‑92 (MQ=255) ggggCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCATCCTAACCCTCTcccc > 1:13229/1‑92 (MQ=255) ggCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCCCCCCCAAACCC‑CTcccccc > 1:8779779/1‑90 (MQ=255) ggCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCa < 1:3226409/93‑1 (MQ=255) ggCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCa < 2:9554903/93‑1 (MQ=255) gCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTACCCCTCTCCCTCAg < 1:2084543/93‑1 (MQ=255) gtGGGTAAAGAGTTGCCTGCGGTACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAgg < 1:3105669/92‑1 (MQ=255) cTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAgg < 2:9790412/93‑1 (MQ=255) tGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCCCACCCcctccctccccc > 1:245178/1‑89 (MQ=255) tGGGTAAAGAGTTGCATGCGGCACTAGAACCCATGACGAAAGGAAATGCGACATAGTCGATAGC‑ACCACTCACCCTAACCCACTCCCTCAggg < 2:9207198/93‑1 (MQ=255) gggTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGga < 2:5647791/93‑1 (MQ=255) gTAAAGAGTTGCCTGCGGGACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCCCCCTAACCCTCTCCCTCAGGgaga < 2:7573275/93‑1 (MQ=255) gTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGgaga < 1:1295749/93‑1 (MQ=255) aaGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAGGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTACCCCTCTCCCTCAGGGAGAggg < 2:4017378/93‑1 (MQ=255) agagTTGCCTGCGGCACTGGCTCCCAGGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCCCCCTAACCCTCTCCCTCAGGGAGAgggg < 1:7144091/93‑1 (MQ=39) gagTTACCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTGGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGa < 2:8172223/93‑1 (MQ=38) agTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGAc < 1:5649429/93‑1 (MQ=255) gTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGAcc < 2:4401722/93‑1 (MQ=255) ttGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCg < 1:6471215/93‑1 (MQ=255) gCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGtt < 1:9793811/93‑1 (MQ=255) ccTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTc < 2:2324952/93‑1 (MQ=255) cgCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCGCAGGGAGAGGGGACCGTTCgg < 1:8239182/92‑1 (MQ=255) gCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGgc < 2:7861797/93‑1 (MQ=255) ggCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGgcgc < 1:1048268/93‑1 (MQ=255) cACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCtg < 1:7347648/93‑1 (MQ=255) cTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCtgta < 1:2019925/93‑1 (MQ=255) cTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCtgta < 2:752014/93‑1 (MQ=255) cTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCtgta < 1:4392442/93‑1 (MQ=255) cTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCtgta < 1:5343765/93‑1 (MQ=255) cTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCtgta < 2:4471912/93‑1 (MQ=255) ggCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCtgtatg < 1:6688538/93‑1 (MQ=255) gCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCtgtatgt < 1:1999051/93‑1 (MQ=255) gCTCCCATGCCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCtgtatgt < 1:7161301/93‑1 (MQ=255) cTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTACCCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCtgtatgta < 1:7468934/93‑1 (MQ=255) cTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCtgtatgta < 1:6995697/93‑1 (MQ=255) tCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCC‑CCCCCCCACCCTCTCCCCCCCGGGGAGGGGGCCGGTTGGGGCggtgtgtta > 2:1626306/1‑91 (MQ=255) tCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTAc < 2:9962110/93‑1 (MQ=255) ccATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTtctc < 2:8456301/93‑1 (MQ=255) cATGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTcc < 2:870701/93‑1 (MQ=255) aTGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTccc < 2:2735544/93‑1 (MQ=255) aTGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTccc < 1:2339406/93‑1 (MQ=255) aTGGCGAAAGGGAATACAGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTATATGAACTcca < 2:8985444/93‑2 (MQ=37) tGGCGAAAGGGAATGCGTCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCt < 2:6424674/93‑1 (MQ=255) tGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCt < 1:6290788/93‑1 (MQ=255) tGGCGAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCCAACCCTCTCCCCCAAGGGGGGGGGGCCGGTCCGCGCGGTGTGTTCTcccc > 2:1569269/1‑92 (MQ=19) gAAAGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCAct < 1:4906364/93‑1 (MQ=255) aaaGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCActc < 2:9448678/93‑1 (MQ=255) aaaGGGAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCActc < 1:8539323/93‑1 (MQ=255) gggAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTATTCCCTCACTCTGa < 1:6407614/93‑1 (MQ=255) gggAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCACCCTCCGGGAGAGGGGGGCGGTCGGCGCTGTATGTTCTCCCTCCCTCTGa > 2:6332229/1‑93 (MQ=255) gAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGaaa < 2:3265898/93‑1 (MQ=255) gAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGaaa < 2:7456019/93‑1 (MQ=255) gAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGaaa < 1:8397496/93‑1 (MQ=255) gAATGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGaaa < 2:51156/93‑1 (MQ=255) aaTGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAAc < 1:7570311/93‑1 (MQ=255) aaTGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTATGAAAc < 1:3703430/93‑1 (MQ=255) tGCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGa < 2:2495325/93‑1 (MQ=255) gCGTCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGac < 2:9683096/93‑1 (MQ=255) gCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGac < 2:7396610/93‑1 (MQ=255) gCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGac < 2:1176646/93‑1 (MQ=255) gCGGCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGac < 2:1665999/93‑1 (MQ=255) gCGGCATAGTAGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGac < 2:2052505/93‑1 (MQ=255) ggCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGacac < 2:3857254/93‑1 (MQ=255) gCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACAcc < 1:9469627/93‑1 (MQ=255) gCATAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACAcc < 1:8117188/93‑1 (MQ=255) aTAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGc < 1:328090/93‑1 (MQ=255) tAGTCGTTTGCGCCCCC‑CACCCCAACCCTCTCCCTCCCGGGGAGGGGGCCGGTCGGCGCCGTATGTACTCCCTCACTCTGCAACGACAccccc > 2:1768026/1‑90 (MQ=255) tAGTCGTTTGCG‑CCCCTCACCCTAGCCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATATACTCCCTCACTCTGAAACGACACCGCa < 2:9237380/93‑1 (MQ=38) tAGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCa < 2:2175823/93‑1 (MQ=255) tAGTCGTTTGCG‑CACCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCgac > 1:362164/1‑91 (MQ=38) aGTCGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCAc < 1:8638426/93‑1 (MQ=255) cGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCActct < 1:4833905/93‑1 (MQ=255) cGTTTGCG‑CCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCActct < 1:9338140/93‑1 (MQ=255) | TTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTT > NC_000913/3778562‑3778745 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |