| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,958,261 | Δ1 bp | intergenic (‑830/‑31) | ppiC ← / → rep | peptidyl‑prolyl cis‑trans isomerase C/rep helicase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,958,261 | 0 | T | . | 75.8% | 268.6 / 116.2 | 127 | intergenic (‑830/‑31) | ppiC/rep | peptidyl‑prolyl cis‑trans isomerase C/rep helicase |
| Reads supporting (aligned to +/- strand): ref base T (2/0); major base . (27/67); minor base C (12/18); total (41/86) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.65e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.21e-01 | |||||||||||
Only 100 of 226 total aligned reads displayed.
GGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑T‑CCTCCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGCCCCTGCCTGGTGC > NC_000913/3958174‑3958352 | tgtcttctctctctgatttaaacatccgcagccaaccggttagcggcttacacgcggtcacattcaaatgcgattctgctacaatcccccccc < 1:4418981‑M2/5‑1 (MQ=255) gtcttctctctctgatttaaacatccgcagccaaccggttagcggcttacacgcggtcacattcaaatgcgattctgctacaatccccccccc > 2:4017505‑M2/88‑93 (MQ=255) gtcttctctctctgatttaaacatccgcagccaaccggttagcggcttacacgcggtcacattcaaatgcgattctgctacaatccccccccc > 1:3860524‑M2/88‑93 (MQ=255) gtcttctctctctgatttaaacatccgcagccaaccggttagcggcttacacgcggtcacattcaaatgcgattctgctacaatccccccccc < 1:5560728‑M2/6‑1 (MQ=255) gtcttctctctctgatttaaacatccgcagccaaccggttagcggcttacacgcggtcacattcaaatgcgattctgctacaatccccccccc > 1:909017‑M2/88‑93 (MQ=255) tcttctctctctgatttaaacatccgcagccaaccggttagcggcttacacgcggtcacattcaaatgcgattctgctacaatcccccccccc > 2:6797187‑M2/87‑93 (MQ=255) tcttctctctctgatttaaacatccgcagccaaccggttagcggcttacacgcggtcacattcaaatgcgattctgctacaatcccccccccc > 1:2464082‑M2/87‑93 (MQ=255) gcttctctctctgatttaaacatccgcagccagccggttagcggcttacacgcggtcacattcaaatgcgattctgctacaatcccccccccc < 2:7000622‑M2/7‑1 (MQ=255) cttctctctctgatttaaacccccccagccaaccggttaggggcttccccgcggtcacattcaaatgcgattctgctacaacccccccccccc < 2:5543939‑M2/8‑1 (MQ=255) ttctctctctgatttaaacatccgcagccaaccggttagcggcttacacgcggtcacattcaaatgcgattctgctacaatcccccccccccg < 1:7702664‑M2/9‑2 (MQ=255) ttctctctctgatttaaacatccgcagccaaccggttagcggcttacacgcggtcacattcaaatgcgattctgctacaatcccccccccccc > 1:1672736‑M2/85‑93 (MQ=255) ttctctctctgatttaaaaatccgcagccaaccggttagcggcttacacgcggtcacattcaaattcgattctgctacaatctccccccccat > 1:4260099‑M2/85‑91 (MQ=255) ttctCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑T‑ACCCCCCCCGtt > 1:3655201/1‑93 (MQ=255) tctctctctgatttaaacatccgcagccaaccggttagcggcttacacgcggtcacattcaaatgcgattctgctacaatcccccccccccgc > 2:3217542‑M2/84‑91 (MQ=255) ctctctctgatttaaacatccgcagccaaccggttagcggcttacacgcggtcacattcaaatgcgattctgctacaatcccccccccccccg > 1:2294093‑M2/83‑91 (MQ=255) tctctctgatttaaacatccgcagccaaccggttagcggcttacacgcggtcacattcaaatgcgattctgctacaatcccccccccccccgt > 2:5336010‑M2/82‑90 (MQ=255) tctctctgatttaaacatccgcagccaaccggttagcggcttacacgcggtcacattcaaatgcgattctgctacaatcccCCCCCCCCCCtt > 2:6931421‑M2/82‑93 (MQ=255) tctctctGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑T‑CCCCCCCCCGTTCGa > 1:4328790/1‑93 (MQ=255) ctctctgatttaaacatccgccgccaaccggttagcggcttacacgcggtcacattcaaatgcgattctgctacaatcccC‑‑CCCCCCGTTCGa < 1:1564872‑M2/13‑1 (MQ=255) ctctctgatttaaacatccgcagccaaccggttagcggcttacacgcggtcacattcaaatgcgattctgctacaatcccCC‑CCCCCCGTTCg < 1:6315338‑M2/13‑1 (MQ=255) ccttctgatttaaacatccgcagccaaccggttagcggcttacacgcggtcccattcaaatgcgattctgcttcaaacccCC‑CCCCCCGTTCg < 2:89882‑M2/13‑1 (MQ=255) tctctgatttaaacatccgcagccaaccggttagcggcttacacgcggtcacattcaaatgcgattctgctacaatcccCCCCCCCCCCTtcc > 2:5758004‑M2/80‑92 (MQ=255) tctgatttaaacatccgcagccaaccggttagcggcttacacgcggtcacattcaaatgcgattctgctacaatcccCC‑CCCCCCCTTCGAAg > 1:3486558‑M2/78‑93 (MQ=255) ctgatttaaacatccgcagccaaccggttagcggcttacacgcggtcacattcaaatgcgattctgctacaatcccC‑‑CCCCCCGTTCGAAGAt < 2:6594945‑M2/17‑1 (MQ=255) tGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAC‑‑T‑CCCCCCCCCGTTCGAAGATTg < 1:1779126/93‑1 (MQ=255) gATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑T‑CCCCCCCCCGTTCGAAGATTGa > 1:6615113/1‑93 (MQ=255) tttaaacatccgcagccaaccggttagcggcttacacgcggtcacattcaaatgcgattctgctacaatcccCC‑CCCCCCCTCCGCAGATtgg > 1:9418767‑M2/73‑92 (MQ=255) aaacatccgcagccaaccggttagcggcttacacgcggtcacattcaaatgcgattctgctacaatcccCC‑CCCCCCGTTCGAAGATTGAGCa < 1:8624318‑M2/24‑1 (MQ=255) aaacatccgcagccaaccggttagcggcttacacgcggtcacattcaaatgcgattctgctacaatcccCC‑CCCCCCCTTCCACgattggaca > 1:4561550‑M2/70‑89 (MQ=255) aaacatccgcagccaaccggttagcggcttacacgcggtcacattcaaatgcgattctgctacaatcccC‑‑CCCCCCGTTCGAAGATTGAGCaa < 2:742600‑M2/24‑1 (MQ=255) aacatccgccgccaaccggttagcggcttacacgcggtcacattcaaatgcggttctgctacaatcccCC‑CCCCCCGTTCGAAGATTGAGCaa < 1:1065023‑M2/25‑1 (MQ=255) acatccgcagccaaccggttagcggcttacacgcggtcacattcaaatgcgattctgctacaatcccCC‑CCCCCCGTTCGAAGATTGAGCAAt < 1:1436907‑M2/26‑1 (MQ=255) aCATCCGCAGCCAACCGGTTAACGGCCTACCCGCGCTCACATTCAAATGCGATTCTGCCAAAA‑‑TCCCCCCCCCCGTTCGAAGATTGAGCAATa < 2:102749/93‑1 (MQ=255) catccgcagccaacgggttagcggcttacacgcggtcacattcaaatgcgattctgctacaatcccC‑‑CCCCCCGGTCGCAGATTTggcaaaaa > 2:7501632‑M2/67‑90 (MQ=255) aatccccagcccacccgttagcggcttacacggcgtcacattcaaatgcgattctgctacaatcccCC‑CCCCCCGTTCGAAGATTGAGCAATa < 2:528114‑M2/27‑1 (MQ=255) atccgcagccaaccggttagcggcttacacgcggtcacattcaaatgcgattctgctacaatcccCC‑CCCCCCGTCCGAGGATTGAGCAATac > 2:1651089‑M2/66‑93 (MQ=255) ccgcagccaaccggttagcggcttacccgcggtcacattcaaatgcgattctgctacaatcccCC‑CCCCCCGTTCGAAGATTGAGCAATacac < 1:5683583‑M2/30‑1 (MQ=255) ccccAGCCAACCCGTTTGCCGCCTTCCCGGCGTCACAATTAAATTCGATTCTGCTACAAACC‑CCCCCCCCCGTTCGAAGATTGAGCAATacac < 2:7342103/90‑1 (MQ=255) gcagccaaccggttagcggcttacacgcggtcacattcaaatgcgattctgctacaatcgcCC‑CCCCCCGTTCCATGATTACGCACTAAacca > 1:9863444‑M2/62‑92 (MQ=255) gcagccaaccggttagcggcttacacgcggtcacattcaaatgcgattctgctacaatcccC‑‑CCCCCCGTTCGAAGATTGAGCAATACACCTa < 1:8107813‑M2/32‑1 (MQ=255) gcagccaaccggttagcggcttacacgcggtcacattcaaatgcgattctactacaatcccC‑‑CCCCCCGTTCGAAGATTGAGCAATACACCTa < 1:4708545‑M2/32‑1 (MQ=255) ccAGCCAACCGGTTAGGGGGTTCCCCGGGGCCCAATTAAAATGGGTTTTGGTAAAAAC‑C‑CCCCCCCCCGTTCGAAGATTGAGCAATACACCTa < 2:2048274/92‑1 (MQ=255) ccagccaaccggttaggggcttacacccggtcacattcaaatgcgattctgctaaaacccCCCCCCCCCGTTCGAAGATTGAGCAATACACCt < 2:1315960‑M2/33‑1 (MQ=255) cagccaaccggttagcggcttacacgcggtcacattcaaatgcgattctgctacaatcccCC‑CCCCCCGTTCGAAGATTGAGCAATACACCTa < 2:3664626‑M2/33‑1 (MQ=255) cagccaaccggttagcggcttacacgcggtcacattcaaatgcgattctgctacaatcccC‑‑CCCCCCGTTCGAAGATTGAGCAATACACCTAt < 2:483309‑M2/33‑1 (MQ=255) gccaaccggttagcggcttacacgcggtcacattcaaatgcgattctgctacaatccccCCCCCCCCCGTTCGAAGATTGAGCAATACACCTa < 2:1578511‑M2/34‑1 (MQ=255) gcgcaaccggttcgcggcttacacgggttcacattcaaatgcgtttctgctacaacccCCCCCCCCCGTTCGAAGATTGAGCAATACACCTAt < 2:5658480‑M2/35‑1 (MQ=255) gccaaccgggtagcggcttacacgcggtcacattcaaatgcgattctgctacaatcccCC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATg < 1:6476733‑M2/35‑1 (MQ=255) accggttagcggcttacacgcggtcacattcaaatgcgattctgctacaatcccC‑‑CCCCCCGTTCGAAGATTGAGCAATACCCGTATGAGTCt > 2:2997471‑M2/55‑93 (MQ=255) gttagcggcttacacgcggtcacattcaaatgcgattctgctacaatcccCCACCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTaa < 1:9590341‑M2/43‑1 (MQ=255) gttagcggcttacacgcggtcacattcaaatgcgattctgctacaatcccCC‑CCCCCCGTTCGACGAGTGGGGAATACACCTATGGGTCTaaa > 2:2753458‑M2/51‑93 (MQ=255) gttagcggcttacacgcggtcacattcaaatgcgattctgctacaatcccCC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTaaa < 1:6284342‑M2/43‑1 (MQ=255) ttagcggcttacacgcggtcacattcaaatgcgattctgctacaatcccC‑‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAAcc > 2:829100‑M2/50‑93 (MQ=255) gtagcggcttacacgcggtcacattcaaatgcgattctgctacaatcccCC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAAc < 2:1150976‑M2/44‑1 (MQ=255) tagcggcttacacgcggtcacattcaaatgcgattctgctacaatcccC‑‑CCCCCCGTTCGACGATTGAGCAATACACCTATGCGCCTAAAccc > 2:6113260‑M2/49‑93 (MQ=255) tagcggcttacacgcggtcacattcaaatgcgattctgctacaatcccC‑‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAAccc < 2:8706114‑M2/45‑1 (MQ=255) tAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑TCCCCCCCCCCCTTTTAAGGATTACCAATAAACCTATGCGGTTAAcccc > 2:6427257/1‑93 (MQ=255) tAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑T‑CCCCCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAAcccc < 1:5443746/93‑1 (MQ=255) agcggcttacccggggtcacattcaaatgccattctgctacaatcccCC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAAccc < 1:4180084‑M2/46‑1 (MQ=255) agcggcttacacgcggtcacatttaaatgcgattctgctacaatcccCC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAAccc < 1:4673532‑M2/46‑1 (MQ=255) gcttacacggggtcacattcaaatgcgattctgctacaatcccC‑‑CCCCCCGTTCGACGATTGAGCAATACACCTATGCGTCTAAACCCCGGcc > 2:6732199‑M2/44‑93 (MQ=255) gcttacacgcggtcacattcaaatgcgattctgctacaatcccC‑‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGcc < 1:3010520‑M2/50‑1 (MQ=255) tacacgcggtcacattcaaatgcgattctgctacaatcccCC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCcaa < 2:5000836‑M2/53‑1 (MQ=255) tcacgcggtcacattcaaatgcgattctgctacaatcccCC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCcaac < 1:3372139‑M2/54‑1 (MQ=255) cacgcggttacattcaaatgcgattctgctacaatcccC‑‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCcaacaa < 1:3272606‑M2/55‑1 (MQ=255) cacgcggtccccttcaaatgcgattctgctacaatcccCC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCcaaca < 1:7811873‑M2/55‑1 (MQ=255) acgcggtcacattcaaatgcgattctgctacaatcccC‑‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCcaacaac < 1:7434421‑M2/56‑1 (MQ=255) ccgcggtcacattcaaatgcgattctgctacaacccCCCCCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCcaacaa < 1:3211655‑M2/57‑1 (MQ=255) cggtcacattcaaatgcgattctgctacaatcccCC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCcaacaacaa < 2:4675230‑M2/59‑1 (MQ=255) cgGTCACATTCAAATGCGATTCTGCTACAA‑‑T‑CCCCCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCCGCCAACAACAAGc > 1:9912845/1‑93 (MQ=255) gtcacattcaaatgcgattctgctacaatcccC‑‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCt < 1:7026253‑M2/61‑1 (MQ=255) gtcacattcaaatgcgattctgctacaatcccC‑‑CCCCCCGTTCGAAGATTGAGAAATACACCTCTGCTTCCAAACCACGGCCAACAACAAGCt > 2:637214‑M2/33‑93 (MQ=255) gTCACATTCAAATGCGATTCTGCTACAA‑‑T‑CCCCCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTg < 1:9807485/93‑1 (MQ=255) tcacattcaaatgcgattctgctacaatcccCC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCt < 1:1282625‑M2/62‑1 (MQ=255) cacaataaaaagcggttcttccacaatcccCCCCCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCt < 2:8037568‑M2/63‑1 (MQ=255) cattcaaatggcattcttccacaatcccCC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTc < 2:1770762‑M2/65‑1 (MQ=255) cattcaaatgctattctgctacaatcccCC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTc < 1:4087391‑M2/65‑1 (MQ=255) ttcaaatgcgattctgctacaatcccC‑‑CCCCCCGTTCGCAGATTGAGCAACACACCTATGCGTCTAAACCCCGGCCCACAACAAACTGTCGaa > 1:6225552‑M2/27‑93 (MQ=255) caaatgcgattctgctacaacccCC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAAtt < 2:7157703‑M2/70‑1 (MQ=255) aaatgcgattctgctacaaacccCC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAAtt < 1:6366238‑M2/70‑1 (MQ=255) atgggattctgctacaatcccCC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCg < 2:3926401‑M2/72‑1 (MQ=255) atgcgattctgctacaatcccC‑‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGt < 2:7567549‑M2/72‑1 (MQ=255) agatattcttctacaatcccC‑‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAGCCCCGGCCAACAACAAGCTGTCGAATTCGtt < 2:6285136‑M2/73‑1 (MQ=255) ccgttctgccaaaaacccCC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTa < 2:4433663‑M2/75‑1 (MQ=255) gattctgttacaatcccCC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTAc < 1:6667132‑M2/76‑1 (MQ=255) attctgctacaatcccC‑‑CCCCCCGTTCGAAGATTGAGCAATACCCCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCg < 1:8754726‑M2/77‑1 (MQ=255) ttctgctacaaacccCC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGTTGTCGAATTCGTTACCg < 2:3102697‑M2/78‑1 (MQ=255) atgtgcaacaaccccCCCCCCCCAGTTCAAAGATTGAGCAATACACCTATGCTTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTAcc < 2:5594756‑M2/78‑1 (MQ=255) tctgctacaacccCC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGc < 1:3424805‑M2/80‑1 (MQ=255) tgctacaatcccC‑‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAACCTGCCCAATTCGTTACCGGccc > 1:3310647‑M2/13‑93 (MQ=255) cctccaaacccCCCCCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGcc < 2:4354739‑M2/82‑1 (MQ=255) ctacaatcccCC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGcccc < 1:3972083‑M2/83‑1 (MQ=255) ctacaaacccCC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGcccc < 2:2125322‑M2/83‑1 (MQ=255) ccaaccccCCCCCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGCCcct < 1:9286680‑M2/85‑1 (MQ=255) acaatcccCC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGCCcctg < 1:8748104‑M2/85‑1 (MQ=255) ccaaccCCCCCCCCCGTTCGAAGATTGAGCAATACCCCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGCCcctgc < 2:7981559‑M2/87‑1 (MQ=255) atccCCCCCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGCCcctgcct < 2:4713267‑M2/89‑1 (MQ=255) aatcCCCCCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGCCcctgcct < 1:2857189‑M2/89‑1 (MQ=255) cccCCCCCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGCCcctgcctg < 2:179460‑M2/90‑1 (MQ=255) accCCCCCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGTTGTCGAATTCGTTACCGGCCcctgcctg < 1:5166070‑M2/90‑1 (MQ=255) | GGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTACAA‑‑T‑CCTCCCCCCGTTCGAAGATTGAGCAATACACCTATGCGTCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGCCCCTGCCTGGTGC > NC_000913/3958174‑3958352 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |