BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,039,960	Δ1 bp	intergenic (+42/‑36)	yihD → / → yihE	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,039,959	0	A	.	100.0%	2709.2 / NA	592	intergenic (+41/‑37)	yihD/yihE	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (262/330); total (262/330)

Only 100 of 639 total aligned reads displayed.

AGAAGACTTCAAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGATAATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATACCATCATGG  >  NC_000913/4039867‑4040047

agaagaCTTCAAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGATa                                                                                          <  1:7805848/93‑1 (MQ=255)

agaagaCTTCAAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGATa                                                                                          <  2:2099222/93‑1 (MQ=255)

 gaagaCTTCAAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGATat                                                                                         <  2:8179754/93‑2 (MQ=255)

   agaCTTCAAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGATatcc                                                                                       >  1:9301370/1‑90 (MQ=255)

     aCTTCAAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCtt                                                                                    <  1:1954813/93‑1 (MQ=255)

        tCAAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGt                                                                                 >  1:9675535/1‑93 (MQ=255)

         cAAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTc                                                                                <  1:1157829/93‑1 (MQ=255)

         cAAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTc                                                                                >  2:7894397/1‑93 (MQ=255)

         cAAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTc                                                                                <  1:537373/93‑1 (MQ=255)

         cAAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTc                                                                                >  2:5528692/1‑93 (MQ=255)

          aaaaCGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCa                                                                               <  2:7106762/93‑1 (MQ=255)

          aaaaCGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCa                                                                               <  2:7410009/93‑1 (MQ=255)

           aaaCGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCAt                                                                              <  2:2661925/93‑1 (MQ=255)

           aaaCGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCATTCGTCAt                                                                              >  1:341656/1‑93 (MQ=255)

            aaCGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCAtt                                                                             >  2:6857447/1‑93 (MQ=255)

             aCGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGCGAAATGAT‑ATCCTTCGTCATTc                                                                            >  1:4918071/1‑93 (MQ=255)

              cGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCg                                                                           >  2:5680552/1‑93 (MQ=255)

                 cgcTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGCAATGAT‑ATCCTTCGTCATTCGTaa                                                                        >  2:9305575/1‑93 (MQ=255)

                 cgcTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTaa                                                                        <  1:6884165/93‑1 (MQ=255)

                  gcTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAAt                                                                       <  1:5785356/93‑1 (MQ=255)

                   cTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATg                                                                      >  2:8381730/1‑93 (MQ=255)

                    tGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGt                                                                     <  1:669671/93‑1 (MQ=255)

                    tGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGt                                                                     >  2:8738049/1‑93 (MQ=255)

                     gTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGtt                                                                    <  2:4531592/93‑1 (MQ=255)

                      ttACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGttt                                                                   >  1:3137112/1‑93 (MQ=255)

                        aCGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTc                                                                 <  1:1728924/93‑1 (MQ=255)

                         cgcgCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTcc                                                                <  1:8770641/93‑1 (MQ=255)

                          gcgcTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCg                                                               <  2:2769720/93‑1 (MQ=255)

                           cgcTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCGTCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCgg                                                              <  2:7534354/93‑1 (MQ=255)

                           cgcTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCgg                                                              >  2:7617155/1‑93 (MQ=255)

                            gcTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGga                                                             <  1:3968317/93‑1 (MQ=255)

                             cTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGgat                                                            >  1:7447502/1‑93 (MQ=255)

                              tCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGgatg                                                           >  2:7671564/1‑93 (MQ=255)

                              tCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGgatg                                                           <  2:118492/93‑1 (MQ=255)

                               cgcgGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGgatga                                                          <  1:7169166/93‑1 (MQ=255)

                               cgcgGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGgatga                                                          <  2:905474/93‑1 (MQ=255)

                               cgcgGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGgatga                                                          >  1:10000811/1‑93 (MQ=255)

                                gcggcgTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGgatgat                                                         <  2:3350284/93‑1 (MQ=255)

                                gcggcgTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGgatgat                                                         >  1:5656656/1‑93 (MQ=255)

                                gcggcgTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGgatgat                                                         <  2:1133830/93‑1 (MQ=255)

                                 cggcgTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGatgatg                                                        <  2:8031194/93‑1 (MQ=255)

                                 cggcgTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGatgatg                                                        >  1:8532834/1‑93 (MQ=255)

                                  ggcgTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATgg                                                       <  1:2906839/93‑1 (MQ=255)

                                   gcgTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATggg                                                      >  2:9428183/1‑93 (MQ=255)

                                     gTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGAt                                                    <  1:1351303/93‑1 (MQ=255)

                                      tAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATg                                                   >  2:6431688/1‑93 (MQ=255)

                                       aaTTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGa                                                  <  1:9061892/93‑1 (MQ=255)

                                       aaTTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGa                                                  <  2:6311101/93‑1 (MQ=255)

                                        aTTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGaa                                                 >  1:358783/1‑93 (MQ=255)

                                         ttAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAAt                                                <  1:822018/93‑1 (MQ=255)

                                         ttAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAAt                                                >  2:5387359/1‑93 (MQ=255)

                                          tAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATa                                               <  2:4388301/93‑1 (MQ=255)

                                           aaaGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATaa                                              <  1:2083972/93‑1 (MQ=255)

                                           aaaGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATaa                                              >  2:3445712/1‑93 (MQ=255)

                                           aaaGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATaa                                              >  2:8572447/1‑93 (MQ=255)

                                            aaGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAAc                                             <  2:2342223/93‑1 (MQ=255)

                                            aaGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAAc                                             >  1:8968481/1‑93 (MQ=255)

                                              gagTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAg                                           <  1:2624966/93‑1 (MQ=255)

                                               agTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAgc                                          >  1:5096404/1‑93 (MQ=255)

                                               agTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAgc                                          <  1:6226790/93‑1 (MQ=255)

                                                 tAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAgcgc                                        <  2:10007971/93‑1 (MQ=255)

                                                  aaaaGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCt                                       <  2:6072361/93‑1 (MQ=255)

                                                  aaaaGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCt                                       <  2:5214834/93‑1 (MQ=255)

                                                   aaaGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCtt                                      <  2:6518958/93‑1 (MQ=255)

                                                    aaGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCttt                                     <  2:7006122/93‑1 (MQ=255)

                                                    aaGCTTCTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACACCGCttt                                     >  2:9661415/1‑93 (MQ=255)

                                                     aGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCtttt                                    >  2:3149203/1‑93 (MQ=255)

                                                      gCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCTTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTa                                   <  1:3827959/93‑1 (MQ=255)

                                                      gCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTa                                   >  2:3973483/1‑93 (MQ=255)

                                                        ttGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACt                                 >  1:7943683/1‑93 (MQ=255)

                                                         tGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACtt                                <  1:9442097/93‑1 (MQ=255)

                                                            aaGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTcc                             >  1:4827280/1‑93 (MQ=255)

                                                            aaGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTcc                             <  1:5423074/93‑1 (MQ=255)

                                                             aGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCa                            <  1:8302773/93‑1 (MQ=255)

                                                             aGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCa                            <  1:2337858/93‑1 (MQ=255)

                                                                 gcgcCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGaca                        <  2:289502/93‑1 (MQ=255)

                                                                 gcgcCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGaca                        >  1:4381329/1‑93 (MQ=255)

                                                                   gcCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACt                      >  2:1596194/1‑93 (MQ=255)

                                                                    ccaccaAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTa                     >  1:4560354/1‑93 (MQ=255)

                                                                      accaAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTaca                   >  2:4900658/1‑93 (MQ=255)

                                                                       ccaAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTacac                  >  1:9931204/1‑93 (MQ=255)

                                                                       ccaAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTacac                  <  2:2237510/93‑1 (MQ=255)

                                                                       ccaAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTacac                  >  2:3915823/1‑93 (MQ=255)

                                                                       ccaAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTacac                  >  1:6357076/1‑93 (MQ=255)

                                                                        caAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACAcc                 >  2:9824335/1‑93 (MQ=255)

                                                                         aaaaTCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACAccc                >  1:4160425/1‑93 (MQ=255)

                                                                         aaaaTCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACAccc                <  1:251964/93‑1 (MQ=255)

                                                                          aaaTCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAATAGCGCTTTTACTTTCCAGACACTACACCCg               <  2:8852514/93‑1 (MQ=255)

                                                                          aaaTCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCg               <  1:6496750/93‑1 (MQ=255)

                                                                            atcatcGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGa             <  2:7261099/93‑1 (MQ=255)

                                                                             tcatcGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGAt            <  1:4624837/93‑1 (MQ=255)

                                                                              catcGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGAtc           >  1:1522310/1‑92 (MQ=255)

                                                                              catcGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATa           <  1:3034740/93‑1 (MQ=255)

                                                                              catcGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATa           >  2:1378336/1‑93 (MQ=255)

                                                                                tcGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCTGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCGGGATagc         >  1:6067983/1‑91 (MQ=255)

                                                                                 cGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATACca        <  2:2559869/93‑1 (MQ=255)

                                                                                  gTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATACcat       >  2:5138849/1‑93 (MQ=255)

                                                                                  gTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATACcat       <  2:4170923/93‑1 (MQ=255)

                                                                                    gAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATACcatca     <  2:1888587/93‑1 (MQ=255)

                                                                                     aaaTGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATACcatcat    <  2:3737790/93‑1 (MQ=255)

AGAAGACTTCAAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGATAATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATACCATCATGG  >  NC_000913/4039867‑4040047

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`