| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,103,967 | (T)8→7 | intergenic (‑716/‑82) | cpxR ← / → yiiP | transcriptional regulator in 2‑component system/putative transport system permease protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,103,960 | 0 | T | . | 94.5% | 1745.7 / 92.4 | 454 | intergenic (‑709/‑89) | cpxR/yiiP | transcriptional regulator in 2‑component system/putative transport system permease protein |
| Reads supporting (aligned to +/- strand): ref base T (3/21); new base . (169/245); total (184/270) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.83e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.16e-01 | |||||||||||
Only 100 of 535 total aligned reads displayed.
CTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTA > NC_000913/4103868‑4104049 | tATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCAT‑CCCCCACATGCTGTGGGGGtt < 2:458206/93‑1 (MQ=255) tttagtagtAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTCCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGGtttt < 1:2898347/90‑1 (MQ=255) ttGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGGtttt > 1:6446490/1‑93 (MQ=255) ttGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGGtttt > 1:3335717/1‑93 (MQ=255) gAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGGtttttt < 2:1439048/93‑1 (MQ=255) gAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGGtttttt < 2:2209856/93‑1 (MQ=255) gAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGGtttttt > 2:3318235/1‑93 (MQ=255) agtagtAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGGttttttt > 1:5305932/1‑93 (MQ=255) gtagtaGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGGttttttta < 1:4262315/93‑2 (MQ=255) tagtagCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGGtttttttat < 2:3884183/93‑3 (MQ=255) tagtagCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGGTTTTTTTTa < 2:5835017/93‑1 (MQ=255) gtagCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGGtttttttatcc > 2:8321693/1‑89 (MQ=255) gtagCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGGtttttttatcc > 2:5912743/1‑89 (MQ=255) gtagCAACTCACGTGCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGGtttttttatcc < 1:5514714/93‑5 (MQ=255) tagCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCt > 1:1189124/1‑93 (MQ=255) tagCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCt > 2:3402840/1‑93 (MQ=255) tagCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCt > 1:2067307/1‑93 (MQ=255) agCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTc < 1:7397559/93‑1 (MQ=255) gCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCa < 1:2364054/93‑1 (MQ=255) gCAACTCACGTTCCCAGTAGCAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCa > 1:8769680/1‑93 (MQ=255) cAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCaa > 1:6095472/1‑93 (MQ=255) aaCTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAAt < 1:9167826/93‑1 (MQ=255) aaCTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAAt > 1:9500936/1‑93 (MQ=255) aCTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAAtt > 1:356587/1‑93 (MQ=255) aCTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAAtt < 1:6901471/93‑1 (MQ=255) aCTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAAtt > 2:4648201/1‑93 (MQ=255) cttaCGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATTCTCAAttt > 2:36348/4‑93 (MQ=255) cTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAAttt < 2:8878003/93‑1 (MQ=255) cACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGc < 2:6417909/93‑1 (MQ=255) cACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGc < 1:3082284/93‑1 (MQ=255) aCGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGcc > 1:1339833/1‑93 (MQ=255) cGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑GTTTTTTATCCTCAATTTGCct > 2:2393462/1‑93 (MQ=255) gTTCCCAGTAGTAAACCCTGTTTGCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCct < 2:2951320/93‑1 (MQ=255) ttCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCctgc < 2:1827855/93‑1 (MQ=255) tCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCctgct < 2:613729/93‑1 (MQ=255) cccAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCctgctg > 2:8518027/1‑93 (MQ=255) cccAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCctgctg > 1:7798457/1‑93 (MQ=255) tagtaAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTaa < 1:9929565/93‑1 (MQ=255) tagtaAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTaa < 1:3924139/93‑1 (MQ=255) gtaAACCCTGTTTTCCTTGCCATAGACCCCATCCCTGTCTT‑CCCCCCCATGCTGTGGGGG‑GTTTTTTATTCTCACTTTGCCTGCTGCTTACTg > 1:7529402/1‑93 (MQ=255) taAACCCTGTTTTCCTTGCCATAGACGCCATCCCTGTCTT‑CCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATg < 2:9546324/93‑1 (MQ=255) taAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGc > 1:4321480/1‑93 (MQ=255) taAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGc > 2:674258/1‑93 (MQ=255) aaaCCCTGTTTGCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCa < 2:7587855/93‑1 (MQ=255) aaCCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCAt < 1:4051958/93‑1 (MQ=255) aaCCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCAt < 1:3816495/93‑1 (MQ=255) aaCCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCAt > 1:712643/1‑93 (MQ=255) aaCCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCAt < 2:6974230/93‑1 (MQ=255) aCCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCAtt > 2:7428498/1‑93 (MQ=255) ccTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGc > 1:4818449/1‑93 (MQ=255) cTGTGTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGc < 1:1884748/93‑1 (MQ=255) tGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAg < 2:440663/93‑1 (MQ=255) gTTTTCCTTGCCATAGACCCCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAga < 2:7683768/93‑1 (MQ=255) ttCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAgatga < 1:9310379/93‑1 (MQ=255) ttCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAgatga < 2:5672190/93‑1 (MQ=255) tCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAgatgat < 2:5521/93‑1 (MQ=255) ccTTGCCATAGACACCATCCCTGTCTT‑CCCCCCCATGCTGTGGGGG‑GTTTTTTATCCTCAATTTGCCTTCTGCTTAATGCATCGCAGATGAtt > 2:2583766/1‑93 (MQ=255) ccTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGAtt < 1:2565828/93‑1 (MQ=255) ccTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGAtt < 1:5134357/93‑1 (MQ=255) ccTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGAtt < 2:2830254/93‑1 (MQ=255) cTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGAttt < 2:6563415/93‑1 (MQ=255) cTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGAttt < 1:584814/93‑1 (MQ=255) tccATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCt < 1:6528433/92‑1 (MQ=255) cATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTc > 1:7694361/1‑93 (MQ=255) tAGACACCATCCCTGTCTTCCCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTcc > 2:3767840/1‑93 (MQ=255) acacCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATTATTTGCTTCCGTta < 2:8067395/93‑1 (MQ=255) acacCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTta < 2:9366284/93‑1 (MQ=255) acacCATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTta < 1:8044289/93‑1 (MQ=255) ctccATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTtat < 2:1233295/91‑1 (MQ=255) cATCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACt < 1:5021939/93‑1 (MQ=255) aTCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTa < 1:458000/93‑1 (MQ=255) tCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAg > 1:8388976/1‑93 (MQ=255) tCCCTGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAg > 1:9768721/1‑93 (MQ=255) ccTGTCTT‑CCCCCACATGCTGTGGGGG‑GTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCg > 2:7103624/1‑93 (MQ=255) tGTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTc < 1:8606224/93‑1 (MQ=255) gTCTT‑CCCCCACATGCTGTGGNGG‑TTTTCTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCa < 1:1726032/93‑1 (MQ=255) gTCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCa > 2:2664002/1‑93 (MQ=255) tCTT‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAg < 1:2130069/93‑1 (MQ=255) tt‑CCCCCACATGTTGTGGGGGGGTTTTTT‑TCCTCAATTTGTCTGCTGCTTAATGCATTGCAGATGAATTGCTTCCGTTATACTATCGTCAggt > 2:8988974/1‑91 (MQ=255) tt‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGtt < 2:8198404/93‑1 (MQ=255) t‑CCCCCACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTg > 2:9141329/1‑93 (MQ=255) cccACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATa < 2:4159445/93‑1 (MQ=255) ccACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAg < 2:3115002/93‑1 (MQ=255) ccACATGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAg > 1:3451505/1‑93 (MQ=255) cacaTGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGc < 1:10012508/93‑1 (MQ=255) acaTGCTGTGGGGG‑TTTTTTTATCCTCATTTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCg > 2:7869549/1‑93 (MQ=255) acaTGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCg > 1:9012510/1‑93 (MQ=255) acaTGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCg < 1:2661609/93‑1 (MQ=255) acaTGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCg > 2:3994400/1‑93 (MQ=255) caTGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCgg < 1:5650910/93‑1 (MQ=255) tGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGa > 2:8673672/1‑93 (MQ=255) tGCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGa > 2:4864413/1‑93 (MQ=255) gCTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAg > 1:6719574/1‑93 (MQ=255) cTGTGGGGG‑TTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGt < 1:4503572/93‑1 (MQ=255) tggggGTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGGGTAtt > 1:8478376/2‑93 (MQ=255) tggggGTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTAtt > 2:1682765/2‑93 (MQ=255) tggggGTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTAtt > 2:3179045/2‑93 (MQ=255) ggggGTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTAttt > 2:5117879/1‑93 (MQ=255) ggggTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTa < 2:1382760/93‑1 (MQ=255) gggTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTa < 1:8933573/93‑1 (MQ=255) | CTATTGAGTAGTAGCAACTCACGTTCCCAGTAGTAAACCCTGTTTTCCTTGCCATAGACACCATCCCTGTCTT‑CCCCCACATGCTGTGGGGGTTTTTTTTATCCTCAATTTGCCTGCTGCTTAATGCATTGCAGATGATTTGCTTCCGTTATACTAGCGTCAGTTGATAGCGGGAGTATTTA > NC_000913/4103868‑4104049 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |