BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	903,232	Δ1 bp	coding (459/516 nt)	ybjP ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	903,232	0	T	.	99.4%	1384.2 / ‑0.7	308	coding (459/516 nt)	ybjP	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); major base . (114/192); minor base C (2/0); total (116/192)
Fisher's exact test for biased strand distribution p-value = 1.41e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 319 total aligned reads displayed.

AATTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCCTAAGTAACGCACATCGTCGATGACCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGA  >  NC_000913/903144‑903319

aaTTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTa                                                                                    >  2:9443090/1‑93 (MQ=255)

aaTTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTa                                                                                    <  2:839276/93‑1 (MQ=255)

aaTTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTa                                                                                    >  1:5579979/1‑93 (MQ=255)

 aTTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCTATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTaa                                                                                   <  2:4345718/93‑1 (MQ=255)

 aTTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTaa                                                                                   <  2:3806895/93‑1 (MQ=255)

 aTTTACGGGGTTTATTGGTTGATCAAGCCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTaa                                                                                   <  1:5187834/93‑1 (MQ=255)

       ggggTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGcaca                                                                             <  1:5919213/93‑1 (MQ=255)

         ggTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACAtc                                                                           <  2:3234662/93‑1 (MQ=255)

         ggTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACAtc                                                                           <  1:8268679/93‑1 (MQ=255)

           tttATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACAtcgt                                                                         >  1:521140/1‑93 (MQ=255)

           tttATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACAtcgt                                                                         >  1:4556769/1‑93 (MQ=255)

           tttATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACAtcgt                                                                         <  1:6816934/93‑1 (MQ=255)

           tttATTGGTTAATCAAGGCTTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACAtcgt                                                                         <  2:1462062/93‑1 (MQ=255)

            ttATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGAGTGACGGAGCTTACCCGCCGTGGCATGAACGCTACCGCC‑ATGTAACGCACAtcgtc                                                                        <  2:9920415/93‑1 (MQ=255)

             tATTGTTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACAtcgtcg                                                                       <  2:219416/93‑1 (MQ=255)

             tATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACAtcgtcg                                                                       >  1:8471348/1‑93 (MQ=255)

             tATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACAtcgtcg                                                                       >  2:5314910/1‑93 (MQ=255)

             tATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACAtcgtcg                                                                       >  2:6541719/1‑93 (MQ=255)

              tttGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGa                                                                      <  2:2325332/92‑1 (MQ=255)

              tttGGTTGAGCATGGCTTGAGCGTTTCTCGACGGACTGACGCGCCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGa                                                                      <  1:5314912/92‑1 (MQ=255)

              aTTGGTTGCTCAAGGGGTGAGCGATTCTCGATGGCCCGAGGGGGCGTACCCGCCGTGGCCTGAAGGCTACCGCC‑AAGTAACGCACATCGTCGa                                                                      <  2:8595125/93‑1 (MQ=255)

              aTTGGTTGATCAAGGCTTTAGCGATTCTCGATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGa                                                                      <  1:118794/93‑1 (MQ=255)

              aTTGGTTGATCAAGGCGTTGGCGATTCTCGATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGa                                                                      <  2:419374/93‑1 (MQ=255)

              aTTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGa                                                                      <  2:6645650/93‑1 (MQ=255)

              aTTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGa                                                                      >  1:6121559/1‑93 (MQ=255)

               ttGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGAt                                                                     <  2:6261862/93‑1 (MQ=255)

                  gTTGATCAGGGCGTTAGCGATTCTCGATGGACTGAGGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATggc                                                                  <  2:5445005/93‑3 (MQ=255)

                    tGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGccc                                                                >  1:1499347/1‑93 (MQ=255)

                     gATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCa                                                               <  2:4834334/93‑1 (MQ=255)

                      aTCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGAGGCATGACCGCAACCG‑CAAAGCAACTCACATAGTCTATGCCCCaa                                                              >  1:8673274/1‑93 (MQ=255)

                        cAAGGCTTTAGCGATTCACGATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAaca                                                            <  1:8958314/93‑1 (MQ=255)

                        cAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAaca                                                            <  2:7900689/93‑1 (MQ=255)

                        cAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAaca                                                            <  2:5116536/93‑1 (MQ=255)

                         aaGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAacac                                                           >  2:9497687/1‑93 (MQ=255)

                          aGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACt                                                          <  2:4543731/93‑1 (MQ=255)

                          aGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACt                                                          >  2:3956833/1‑93 (MQ=255)

                          aGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACt                                                          <  1:8078231/93‑1 (MQ=255)

                           ggCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTg                                                         <  1:9138889/93‑1 (MQ=255)

                             cGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACCCTGGc                                                       >  1:9914729/1‑93 (MQ=255)

                              gTTAGCGATTCTCGATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGcc                                                      <  1:5743789/93‑1 (MQ=255)

                               ttAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGGC‑AAGCAACGCACATCGTCGATGGCCCAACACTGGCCt                                                     >  1:226102/1‑93 (MQ=255)

                               tgaGCGATGCTGGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCt                                                     <  2:6063947/91‑1 (MQ=255)

                                    gATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTg                                                >  1:2502144/1‑93 (MQ=255)

                                     aTTCTCGATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGa                                               <  2:7487761/93‑1 (MQ=255)

                                     aTTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGa                                               >  1:2081857/1‑93 (MQ=255)

                                      ttCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGaa                                              >  1:188957/1‑93 (MQ=255)

                                      ttCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGaa                                              >  2:2611822/1‑93 (MQ=255)

                                       tctcGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAAt                                             <  1:6011419/93‑1 (MQ=255)

                                         tcGATGGACTGAGGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCa                                           <  1:8722299/93‑1 (MQ=255)

                                         tcGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCa                                           >  1:4279738/1‑93 (MQ=255)

                                         ccGATGGCCTGACGGGGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCa                                           <  1:7393426/92‑1 (MQ=255)

                                           gATGGACTGACGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCAtt                                         <  1:8909482/93‑1 (MQ=255)

                                           gATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCAtt                                         <  2:901414/93‑1 (MQ=255)

                                           gATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCAtt                                         >  2:7339000/1‑93 (MQ=255)

                                            aTGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTa                                        >  1:509011/1‑93 (MQ=255)

                                            aTGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTa                                        >  2:3882130/1‑93 (MQ=255)

                                             tgtaCTGACAGAGCTTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTaa                                       <  2:5952976/90‑1 (MQ=255)

                                              ggACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAac                                      >  2:9222787/1‑93 (MQ=255)

                                               gacggacgGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAaca                                     <  2:1042531/93‑1 (MQ=255)

                                               gACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAaca                                     >  1:1854709/1‑93 (MQ=255)

                                                aCTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTGacac                                    >  2:7733276/1‑93 (MQ=255)

                                                aCTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAacac                                    <  1:3436262/93‑1 (MQ=255)

                                                  tGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACtt                                  >  2:1742016/1‑93 (MQ=255)

                                                   gACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTc                                 <  1:2802422/93‑1 (MQ=255)

                                                    ccGGAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCa                                <  2:975901/92‑1 (MQ=255)

                                                    aCGGAGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCa                                <  1:9180007/93‑1 (MQ=255)

                                                      ggAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATc                              <  1:8026125/93‑1 (MQ=255)

                                                       gAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATcc                             >  2:1587610/1‑93 (MQ=255)

                                                       gAGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATcc                             <  1:6422731/93‑1 (MQ=255)

                                                        aGCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCt                            <  2:501208/93‑1 (MQ=255)

                                                        aGCGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCt                            <  1:669358/93‑1 (MQ=255)

                                                         gCGTCCCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTg                           <  1:3234239/93‑1 (MQ=255)

                                                          cGTACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGc                          <  1:4073106/93‑1 (MQ=255)

                                                           gtccccGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGcc                         <  1:3685625/90‑1 (MQ=255)

                                                            tACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCa                        >  2:3684300/1‑93 (MQ=255)

                                                            tACCCGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCa                        >  1:3834122/1‑93 (MQ=255)

                                                             aCCCGCCGTGGCATGAACGCTACCTCC‑AAGTAACGCACATCGTCGATGGCCTAACACTGGCCTTCCTGAATCATTAACACTTCATACTGCCaa                       >  1:7725308/1‑93 (MQ=255)

                                                              cccGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAAc                      <  1:45420/93‑1 (MQ=255)

                                                              cccGCCGTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAAc                      <  2:5252785/93‑1 (MQ=255)

                                                               ccgccgTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAAcc                     >  1:4939068/1‑93 (MQ=255)

                                                                cgccgTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAAccc                    >  1:967355/1‑93 (MQ=255)

                                                                 gccgTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCGACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCt                   <  1:8560968/93‑1 (MQ=255)

                                                                 gccgTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCt                   <  2:2072111/93‑1 (MQ=255)

                                                                 gccgTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCt                   <  2:283423/93‑1 (MQ=255)

                                                                  ccgTGGCATAAACGCTACCGCC‑AAGTAACGCACATCGCCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTg                  <  1:9026833/93‑1 (MQ=255)

                                                                   cgTGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTgg                 >  2:1174055/1‑93 (MQ=255)

                                                                     tGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTc               <  2:8811384/93‑1 (MQ=255)

                                                                     tGGCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTc               <  1:1682857/93‑1 (MQ=255)

                                                                      ggCATGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCa              <  1:7552705/93‑1 (MQ=255)

                                                                          tGAACGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCt          >  1:2834558/1‑93 (MQ=255)

                                                                            aaCGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGt        <  2:2481465/93‑1 (MQ=255)

                                                                            aaCGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGt        <  2:7392535/93‑1 (MQ=255)

                                                                            aaCGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGt        <  1:6269787/93‑1 (MQ=255)

                                                                             aCGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGtt       <  2:698362/93‑1 (MQ=255)

                                                                             aCGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGtt       <  1:7042138/93‑1 (MQ=255)

                                                                             aCGCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGtt       >  1:1033389/1‑93 (MQ=255)

                                                                               gCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTg     <  2:8179706/93‑1 (MQ=255)

                                                                               gCTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTg     >  1:4385120/1‑93 (MQ=255)

                                                                                cTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTga    >  2:6835105/1‑93 (MQ=255)

                                                                                cTACCGCC‑AAGTAACGCACATCGTCGATGGCCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTga    >  1:4786832/1‑93 (MQ=255)

AATTTACGGGGTTTATTGGTTGATCAAGGCGTTAGCGATTCTCGATGGACTGACGGAGCGTACCCGCCGTGGCATGAACGCTACCGCCTAAGTAACGCACATCGTCGATGACCCAACACTGGCCTTCCTGAATCATTAACACTTCATCCTGCCAACCCTGGTCACCCTGTTTGAGA  >  NC_000913/903144‑903319

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`