BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,680,496	(C)_5→4	coding (323/729 nt)	rstA →	response transcriptional regulatory protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,680,492	0	C	.	100.0%	1163.2 / NA	256	coding (319/729 nt)	rstA	response transcriptional regulatory protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (133/123); total (133/123)

Only 100 of 298 total aligned reads displayed.

GACCGATTGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGCCCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGAAACGTCTCT  >  NC_000913/1680400‑1680580

gACCGATTGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGc                                                                                          >  2:9536118/1‑93 (MQ=255)

  ccGATTGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGccc                                                                                        <  1:4812140/93‑1 (MQ=255)

  ccGATTGTTCTTCTAACCTCTCTCGATAGAGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGccc                                                                                        >  2:6921399/1‑93 (MQ=255)

   cGATTGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGcccc                                                                                       >  2:8797970/1‑93 (MQ=255)

   cGATTGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGcccc                                                                                       <  1:7143732/93‑1 (MQ=255)

   cGATTGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGcccc                                                                                       <  2:4872754/93‑1 (MQ=255)

    gATTGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGcccct                                                                                      >  2:798357/1‑92 (MQ=255)

    gATTGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGcccct                                                                                      >  1:9058803/1‑92 (MQ=255)

    gATTGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGcccct                                                                                      >  2:6256582/1‑92 (MQ=255)

     aTTGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGcccctg                                                                                     <  2:6649072/93‑3 (MQ=255)

     aTTGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGcccctg                                                                                     >  1:449603/1‑91 (MQ=255)

      ttGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGcccctgc                                                                                    >  1:1585114/1‑90 (MQ=255)

        gTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCctgctg                                                                                 >  1:7751551/1‑93 (MQ=255)

            ttctAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGtttt                                                                             <  1:1924923/93‑1 (MQ=255)

            ttctAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGtttt                                                                             <  1:7295203/93‑1 (MQ=255)

             tctAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACAAC‑CCCCCGCCTGtttgc                                                                            >  1:6710361/1‑91 (MQ=255)

               tAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCt                                                                          <  2:7740409/93‑1 (MQ=255)

                aaCCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTa                                                                         >  1:5384892/1‑93 (MQ=255)

                aaCCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTa                                                                         >  2:80908/1‑93 (MQ=255)

                aaCCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTa                                                                         <  2:5822133/93‑1 (MQ=255)

                 aCCTCTCTCGATAGCGATATGAACCTCATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAg                                                                        <  2:3853680/93‑1 (MQ=255)

                  ccTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAgc                                                                       <  1:6458719/93‑1 (MQ=255)

                    tctctcGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAgcgc                                                                     >  2:6538941/1‑93 (MQ=255)

                        tcGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGttt                                                                 >  2:1913346/1‑93 (MQ=255)

                         cGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTa                                                                <  2:7127509/93‑1 (MQ=255)

                          gATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTAc                                                               >  1:2082859/1‑93 (MQ=255)

                          gATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTAc                                                               <  1:3275080/93‑1 (MQ=255)

                          gATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTAc                                                               >  2:4944898/1‑93 (MQ=255)

                           aTAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACg                                                              >  1:10018326/1‑93 (MQ=255)

                           aTAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACg                                                              <  2:2968872/93‑1 (MQ=255)

                            tAGCGATATGAACCGCATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGt                                                             <  1:2611491/93‑1 (MQ=255)

                            tAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGt                                                             >  1:3004137/1‑93 (MQ=255)

                            tAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGt                                                             <  2:3288943/93‑1 (MQ=255)

                            tAGCGATATGAACCACATCCTGGCACTGGAAATGGG‑GCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGtt                                                            >  1:8081182/1‑93 (MQ=255)

                             aGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGtt                                                            <  1:2403139/93‑1 (MQ=255)

                             aGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGtt                                                            <  2:8524350/93‑1 (MQ=255)

                              gCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGttt                                                           <  1:9839919/93‑1 (MQ=255)

                                gATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGc                                                         >  2:2306981/1‑93 (MQ=255)

                                gATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGc                                                         <  1:505956/93‑1 (MQ=255)

                                gATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGc                                                         >  2:9668765/1‑93 (MQ=255)

                                 atatGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCa                                                        >  2:9911660/1‑93 (MQ=255)

                                   atGAACCACATCCTGGCACTGGAAATGGTTGCCTGCGACGATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCAtt                                                      <  2:1554782/93‑1 (MQ=255)

                                   atGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCAtt                                                      <  1:392047/93‑1 (MQ=255)

                                      aaCCACCTCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGc                                                   <  2:3492150/93‑1 (MQ=255)

                                      aaCCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGc                                                   <  2:720669/93‑1 (MQ=255)

                                      aaCCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGc                                                   <  2:5177951/93‑1 (MQ=255)

                                       aCCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCg                                                  >  2:5910965/1‑93 (MQ=255)

                                       aCCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCg                                                  >  1:6318059/1‑93 (MQ=255)

                                        ccACATCCGTGCACTGGAAATGGGTGCCTGCGGCTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGt                                                 <  1:3138612/93‑1 (MQ=255)

                                         cacaTCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTc                                                >  2:1009144/1‑93 (MQ=255)

                                         cacaTCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTc                                                >  2:9324095/1‑93 (MQ=255)

                                          acaTCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCa                                               >  1:9592224/1‑93 (MQ=255)

                                          acaTCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCa                                               >  1:7599283/1‑93 (MQ=255)

                                            aTCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGa                                             >  1:1448893/1‑93 (MQ=255)

                                            aTCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGa                                             >  1:1860238/1‑93 (MQ=255)

                                             tCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGaa                                            <  2:3067625/93‑1 (MQ=255)

                                             tCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGaa                                            >  1:5171075/1‑93 (MQ=255)

                                             tCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGaa                                            >  1:2310395/1‑93 (MQ=255)

                                              ccTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAAt                                           >  1:2838373/1‑93 (MQ=255)

                                              ccTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAAt                                           <  1:5793987/93‑1 (MQ=255)

                                               cTGGCACTGGAAATGGGTGCTTGAGACTATATTATCAACACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATg                                          <  2:5430657/93‑1 (MQ=255)

                                               cTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGGATg                                          >  2:3991920/1‑93 (MQ=255)

                                                tGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGa                                         <  1:4185277/93‑1 (MQ=255)

                                                  gCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGc                                       <  2:1200235/93‑1 (MQ=255)

                                                   cACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCa                                      <  2:4237486/93‑1 (MQ=255)

                                                   cACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCa                                      <  1:5297242/93‑1 (MQ=255)

                                                    aCTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCaa                                     >  2:3224996/1‑93 (MQ=255)

                                                    aCTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCaa                                     >  1:1689847/1‑93 (MQ=255)

                                                      tGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGc                                   >  2:4374208/1‑93 (MQ=255)

                                                      tGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGc                                   >  1:8701415/1‑93 (MQ=255)

                                                      tGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGc                                   >  1:5439185/1‑93 (MQ=255)

                                                         aaaTGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCcac                                <  2:1345852/93‑1 (MQ=255)

                                                          aaTGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCcaca                               >  1:2977142/1‑93 (MQ=255)

                                                          aaTGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCcaca                               <  2:216120/93‑1 (MQ=255)

                                                           aTGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCacac                              >  2:7305230/1‑93 (MQ=255)

                                                            tGGGTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACt                             >  1:1299676/1‑93 (MQ=255)

                                                             gggTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTg                            >  1:2774929/1‑93 (MQ=255)

                                                              ggTGCCTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGa                           >  1:6128827/1‑93 (MQ=255)

                                                                   cTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCaaa                      >  1:1181723/1‑93 (MQ=255)

                                                                   cTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCaaa                      <  2:8686405/93‑1 (MQ=255)

                                                                   cTGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCaaa                      <  1:9322443/93‑1 (MQ=255)

                                                                    tGCGACTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAg                     <  2:6389839/93‑1 (MQ=255)

                                                                        aCTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCt                 >  2:4327501/1‑93 (MQ=255)

                                                                        aCTATATTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCt                 >  2:9114227/1‑93 (MQ=255)

                                                                          tataTTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTc               >  2:2493526/1‑93 (MQ=255)

                                                                          tataTTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTc               >  1:3559808/1‑93 (MQ=255)

                                                                           atatTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCa              <  1:7854494/93‑1 (MQ=255)

                                                                           atatTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCa              >  2:5197360/1‑93 (MQ=255)

                                                                           atatTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCa              >  1:705813/1‑93 (MQ=255)

                                                                            tatTCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAg             >  1:7995108/1‑93 (MQ=255)

                                                                              ttCTCAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGTGTTAGAATGAGCAAGCCACACTGACCAAAGTTCTTCAGGa           >  2:9221696/1‑93 (MQ=255)

                                                                               tctcAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGaa          >  2:8356866/1‑93 (MQ=255)

                                                                               tctcAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGaa          <  1:8241798/93‑1 (MQ=255)

                                                                               tctcAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGaa          >  2:2594999/1‑93 (MQ=255)

                                                                                ctcAAAACGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGaaa         <  2:5097539/93‑1 (MQ=255)

                                                                                   aaaaCGACG‑CCCCGGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGAAACGt      <  2:3675839/93‑1 (MQ=255)

                                                                                    aaaCGACG‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGAAACGtc     >  2:9071695/1‑93 (MQ=255)

                                                                                      acgacg‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGAAACGtctc   <  1:8494628/93‑1 (MQ=255)

                                                                                      acgacg‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGAAACGtctc   <  1:6553519/93‑1 (MQ=255)

                                                                                       cgacg‑CCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGAAACGTctct  <  2:7613446/93‑1 (MQ=255)

GACCGATTGTTCTTCTAACCTCTCTCGATAGCGATATGAACCACATCCTGGCACTGGAAATGGGTGCCTGCGACTATATTCTCAAAACGACGCCCCCTGCTGTTTTGCTAGCGCGTTTACGTTTGCATTTGCGTCAGAATGAGCAAGCCACACTGACCAAAGGTCTTCAGGAAACGTCTCT  >  NC_000913/1680400‑1680580

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`