BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,185,017	Δ1 bp	coding (38/339 nt)	b2107 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,185,014	0	T	.	99.7%	1433.6 / ‑4.2	318	coding (35/339 nt)	b2107	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/1); major base . (147/169); minor base G (1/0); total (148/170)
Fisher's exact test for biased strand distribution p-value = 4.67e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 355 total aligned reads displayed.

TATTGTATGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGCTTTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGTAGT  >  NC_000913/2184922‑2185102

 atTGTATGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGCtt                                                                                         >  1:9810334/1‑93 (MQ=255)

 atTGTATGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGCtt                                                                                         <  1:6669363/93‑1 (MQ=255)

 atTGTATGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGCtt                                                                                         <  1:4023046/93‑1 (MQ=255)

  ttGTATGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGCttt                                                                                        <  1:9165046/93‑1 (MQ=255)

   tGTATGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGCtttg                                                                                       >  2:88439/1‑92 (MQ=255)

   tGTATGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGCtttg                                                                                       <  1:9703381/93‑2 (MQ=255)

      aTGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGCtttgctg                                                                                    <  1:253964/93‑5 (MQ=255)

       tGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTgg                                                                                  <  2:525230/93‑1 (MQ=255)

       tGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTgg                                                                                  >  1:4632362/1‑93 (MQ=255)

          gaGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTa                                                                               <  2:6928702/92‑1 (MQ=255)

           aGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTAc                                                                              >  2:6251749/1‑93 (MQ=255)

            ggAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTAcc                                                                             >  2:1384498/1‑93 (MQ=255)

            ggAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTAcc                                                                             >  2:2312280/1‑93 (MQ=255)

            ggAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTAcc                                                                             <  1:4177771/93‑1 (MQ=255)

            ggAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTAcc                                                                             >  1:3422476/1‑93 (MQ=255)

              aaaGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAg                                                                           <  2:482457/93‑1 (MQ=255)

              aaaGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAg                                                                           <  1:6882661/93‑1 (MQ=255)

              aaaGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAg                                                                           <  1:8862874/93‑1 (MQ=255)

               aaGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGt                                                                          <  2:6800923/93‑1 (MQ=255)

                 gATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAACTAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTgc                                                                        >  2:7630565/1‑93 (MQ=255)

                 gATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTgc                                                                        >  1:7789534/1‑93 (MQ=255)

                 gATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGATGCGC‑TTTGCTGGTTACCAGTgc                                                                        >  1:4563555/1‑93 (MQ=255)

                     tGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTgccgcc                                                                    >  1:3281133/1‑93 (MQ=255)

                      gCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCt                                                                   <  2:8453969/93‑1 (MQ=255)

                       cGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTg                                                                  <  2:6088542/93‑1 (MQ=255)

                       cGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTg                                                                  <  1:8174629/93‑1 (MQ=255)

                        gACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTgg                                                                 <  1:2144894/93‑1 (MQ=255)

                        gACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTgg                                                                 <  2:1112720/93‑1 (MQ=255)

                         aCTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTggg                                                                >  1:2900507/1‑93 (MQ=255)

                          cTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGc                                                               >  1:1734760/1‑93 (MQ=255)

                          cTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGc                                                               <  2:3867508/93‑1 (MQ=255)

                           tGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGcc                                                              <  1:4908587/93‑1 (MQ=255)

                           tGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGcc                                                              <  2:4383853/93‑1 (MQ=255)

                              tatTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCa                                                           <  1:2922365/93‑1 (MQ=255)

                                ttACAGATCCCCGAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCAcc                                                         >  1:7524333/1‑93 (MQ=255)

                                ttACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCAcc                                                         >  1:5998393/1‑93 (MQ=255)

                                  aCAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAg                                                       >  2:1947618/1‑93 (MQ=255)

                                   cAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGc                                                      >  2:8594050/1‑93 (MQ=255)

                                     gATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCa                                                    <  2:2457467/93‑1 (MQ=255)

                                     gATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCa                                                    <  2:9369512/93‑1 (MQ=255)

                                      aTCCCCAAAGGGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACAAGCCAc                                                   >  2:3561554/1‑93 (MQ=255)

                                       tCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCAcc                                                  <  1:8236474/93‑1 (MQ=255)

                                       tCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCAcc                                                  >  2:2815054/1‑93 (MQ=255)

                                        ccccAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACcg                                                 >  2:7820465/1‑93 (MQ=255)

                                           cAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCgg                                              >  1:271821/1‑93 (MQ=255)

                                           cAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCgg                                              <  2:3195489/93‑1 (MQ=255)

                                           cAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCgg                                              >  2:297166/1‑93 (MQ=255)

                                            aaaGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCggg                                             <  1:5557208/93‑1 (MQ=255)

                                             aaGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGt                                            <  2:506417/93‑1 (MQ=255)

                                               gTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTc                                          <  1:8377014/93‑1 (MQ=255)

                                                 ggAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCG‑GTTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGa                                        >  1:9499531/1‑93 (MQ=255)

                                                  gagaGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGAc                                       >  2:958359/1‑93 (MQ=255)

                                                    gagTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCa                                     <  1:1185965/93‑1 (MQ=255)

                                                     agTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCaa                                    >  1:9327909/1‑93 (MQ=255)

                                                      gTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAAt                                   <  1:1073930/93‑1 (MQ=255)

                                                      gTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAAt                                   <  1:8994855/93‑1 (MQ=255)

                                                      gTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAAt                                   <  2:4536491/93‑1 (MQ=255)

                                                       tttATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTTCCGCCTGGGCCGCACCAGCCATCGCGGGTTCGACCAATa                                  >  2:4036356/1‑93 (MQ=255)

                                                       tttATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAAtc                                  >  1:8053888/1‑92 (MQ=255)

                                                         tATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATAcc                                <  1:9775295/93‑1 (MQ=255)

                                                         tATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATAcc                                <  1:5425723/93‑1 (MQ=255)

                                                         tATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATAcc                                <  2:426274/93‑1 (MQ=255)

                                                         tATGACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCA‑CAGCCACCGCGGGGTCGACCAATAccc                               >  2:2101925/1‑92 (MQ=255)

                                                            gACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCg                             >  2:7475017/1‑93 (MQ=255)

                                                            gACCATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGATCGACCAATACCTCg                             >  1:4248676/1‑93 (MQ=255)

                                                              ccATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCggg                           >  2:1023511/1‑93 (MQ=255)

                                                               cATTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGa                          >  2:6553358/1‑93 (MQ=255)

                                                                aTTAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGaa                         <  1:3020323/93‑1 (MQ=255)

                                                                 ttAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAAt                        >  1:1806286/1‑93 (MQ=255)

                                                                  tAAAAATAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAAtt                       <  1:1530769/93‑1 (MQ=255)

                                                                   aaaaaTAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAAttt                      <  1:199307/93‑1 (MQ=255)

                                                                   aaaaaTAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAAttt                      <  2:5345272/93‑1 (MQ=255)

                                                                    aaaaTAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTc                     <  1:1398193/93‑1 (MQ=255)

                                                                      aaTAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTa                   >  2:5728080/1‑93 (MQ=255)

                                                                       aTAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTaa                  <  1:2188122/93‑1 (MQ=255)

                                                                        tAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAg                 >  2:3623518/1‑93 (MQ=255)

                                                                        tAAGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGGTCGACCAATACCTCGGGAATTTCTAAg                 >  1:7198358/1‑93 (MQ=255)

                                                                          aGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTa               >  2:2349677/1‑93 (MQ=255)

                                                                          aGATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTa               <  2:9309/93‑1 (MQ=255)

                                                                          aGATGTAGCGGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATCCCTCGGGAATTTCTAAGTa               <  1:6502338/93‑1 (MQ=255)

                                                                           gATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTAt              <  1:5853130/93‑1 (MQ=255)

                                                                           gATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTAt              <  1:8954886/93‑1 (MQ=255)

                                                                           gATGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCAACCAATACCTCGGGAATTTCTAAGTAt              >  2:6655547/1‑93 (MQ=255)

                                                                            aTGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATg             >  1:3673533/1‑93 (MQ=255)

                                                                            aTGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATg             >  2:9018433/1‑93 (MQ=255)

                                                                             tGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGa            <  1:2331011/93‑1 (MQ=255)

                                                                             tGTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGa            <  1:7720385/93‑1 (MQ=255)

                                                                              gTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAg           >  2:7315091/1‑93 (MQ=255)

                                                                              gTTGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAg           >  2:5566848/1‑93 (MQ=255)

                                                                               ttGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGt          <  1:7390279/93‑1 (MQ=255)

                                                                               ttGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGt          >  2:4870172/1‑93 (MQ=255)

                                                                                tGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTGAGTATGAGtt         >  2:4481829/1‑93 (MQ=255)

                                                                                tGCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGtt         <  1:8780325/93‑1 (MQ=255)

                                                                                 gCTGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTa        <  2:7966526/93‑1 (MQ=255)

                                                                                   tGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAag      <  2:3507676/93‑1 (MQ=255)

                                                                                   tGGGTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAag      <  2:8193970/93‑1 (MQ=255)

                                                                                    gggTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAagc     <  2:5022037/93‑2 (MQ=255)

                                                                                     ggTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAagca    <  2:581184/93‑3 (MQ=255)

                                                                                      gTGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAagcag   >  2:7191224/1‑93 (MQ=255)

                                                                                       tGCGC‑TTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAagcagt  <  2:1713711/93‑1 (MQ=255)

TATTGTATGGCAGGAAAGATATGCGACTGATATTACAGATCCCCAAAGTGGAGAGTTTATGACCATTAAAAATAAGATGTTGCTGGGTGCGCTTTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGGTTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGTAGT  >  NC_000913/2184922‑2185102

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`