Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,284,989 (C)5→4 coding (1932/2511 nt) yejO ← putative ATP‑binding component of a transport system

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,284,9850C.99.2% 1107.7 / ‑0.6 247coding (1936/2511 nt)yejOputative ATP‑binding component of a transport system
Reads supporting (aligned to +/- strand):  ref base C (1/1);  new base . (116/129);  total (117/130)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.79e-01

Only 100 of 275 total aligned reads displayed.

CTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAATT  >  NC_000913/2284894‑2285073
                                                                                           |                                                                                        
    tCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGccccag                                                                                     <  1:10035666/93‑3 (MQ=255)
        gCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGta                                                                                >  2:5072836/1‑93 (MQ=255)
         ccATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGtat                                                                               <  1:2017067/93‑1 (MQ=255)
          cATGGATGGTGTTTGCAAAACGGTCCACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGtata                                                                              <  1:7801744/93‑1 (MQ=255)
          cATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCTCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGtata                                                                              <  2:3415204/93‑1 (MQ=255)
          cATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCGAACCGGCATAAGCCCCAGGGtata                                                                              <  2:665538/93‑1 (MQ=255)
           atggatggTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAg                                                                             >  2:8038187/1‑93 (MQ=255)
             ggatggTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCt                                                                           <  2:8905648/93‑1 (MQ=255)
             ggatggTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCt                                                                           <  2:4697726/93‑1 (MQ=255)
             ggatggTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCt                                                                           <  1:4062767/93‑1 (MQ=255)
              gatggTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTa                                                                          >  2:228619/1‑93 (MQ=255)
              gatggTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTa                                                                          <  2:7419499/93‑1 (MQ=255)
               atggTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTAt                                                                         <  2:6088513/93‑1 (MQ=255)
               atggTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTAt                                                                         >  2:8128312/1‑93 (MQ=255)
                tggTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATc                                                                        >  1:4075077/1‑93 (MQ=255)
                 ggTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCg                                                                       <  2:2756754/93‑1 (MQ=255)
                 ggTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCg                                                                       >  2:8501750/1‑93 (MQ=255)
                  gtgtTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGa                                                                      <  2:4227155/93‑1 (MQ=255)
                    gtTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGata                                                                    <  1:3142921/93‑1 (MQ=255)
                    gtTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGata                                                                    >  2:938340/1‑93 (MQ=255)
                      tGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATAtt                                                                  <  1:1998482/93‑1 (MQ=255)
                          aaaaCGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCt                                                              <  2:2336417/93‑1 (MQ=255)
                           aaaTGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCtt                                                             <  1:3358218/93‑1 (MQ=255)
                           aaaCGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCtt                                                             >  2:6311836/1‑93 (MQ=255)
                               cgTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTgcc                                                         <  1:5267134/92‑1 (MQ=255)
                                 tCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTgccgc                                                       >  1:981848/1‑93 (MQ=255)
                                 tCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTgccgc                                                       <  2:1854425/93‑1 (MQ=255)
                                 tCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTgccgc                                                       <  2:6455005/93‑1 (MQ=255)
                                 tCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTgccgc                                                       <  1:1115341/93‑1 (MQ=255)
                                 tCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTgccgc                                                       >  1:4473080/1‑93 (MQ=255)
                                  taaCTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTgccgcc                                                      <  2:7334410/92‑1 (MQ=255)
                                    aCTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCcgccgc                                                    <  2:6573303/93‑1 (MQ=255)
                                     cTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCcgcg                                                   >  1:4227393/1‑93 (MQ=255)
                                      tttCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGa                                                  <  1:6429661/93‑1 (MQ=255)
                                      tttCACCACCCCATCAACATAGGCACCGTTCTGATGCCCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGa                                                  <  1:5489529/93‑1 (MQ=255)
                                       ttCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGAt                                                 >  2:6563508/1‑93 (MQ=255)
                                        tCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATc                                                >  2:5810201/1‑93 (MQ=255)
                                          accaccCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCaa                                              >  2:150852/1‑93 (MQ=255)
                                          accaccCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCaa                                              >  1:8831894/1‑93 (MQ=255)
                                            caccCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCaaaa                                            >  2:8338751/1‑93 (MQ=255)
                                            caccCCATCAACATAGGCACCGTGCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCaaaa                                            <  1:2424706/93‑1 (MQ=255)
                                             accCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAAc                                           >  2:4362224/1‑93 (MQ=255)
                                              ccccATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAAcc                                          >  1:7785548/1‑93 (MQ=255)
                                               cccATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCa                                         >  1:2667680/1‑93 (MQ=255)
                                                ccATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCaa                                        >  2:3630481/1‑93 (MQ=255)
                                                   tCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAatat                                     >  2:2757879/1‑93 (MQ=255)
                                                   tCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAatat                                     >  1:3517740/1‑93 (MQ=255)
                                                   tCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAatat                                     >  1:1047017/1‑93 (MQ=255)
                                                    cAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATc                                    <  1:2795704/93‑1 (MQ=255)
                                                    cAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATc                                    <  1:8545825/93‑1 (MQ=255)
                                                     aaCATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGGATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCa                                   >  2:1989926/1‑93 (MQ=255)
                                                      acacAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAg                                  <  2:9257155/93‑1 (MQ=255)
                                                        aTAGGCACCGTTCTGATGCTCCCTACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGaa                                <  2:5507959/93‑1 (MQ=255)
                                                        aTAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGaa                                <  2:1177861/93‑1 (MQ=255)
                                                        aTAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGaa                                <  1:1173110/93‑1 (MQ=255)
                                                        aTAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGaa                                >  1:2434492/1‑93 (MQ=255)
                                                        aTAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGaa                                >  1:9159060/1‑93 (MQ=255)
                                                        aTAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGaa                                <  1:5197792/93‑1 (MQ=255)
                                                        aTAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGaa                                <  1:6983145/93‑1 (MQ=255)
                                                         tAGGCACCGTCCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAAt                               <  2:7805477/93‑1 (MQ=255)
                                                            gCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATgag                            >  1:1237641/1‑93 (MQ=255)
                                                            gCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATgag                            >  1:4883701/1‑93 (MQ=255)
                                                             cACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATgaga                           <  1:6106084/93‑1 (MQ=255)
                                                             cACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATgaga                           <  1:8747388/93‑1 (MQ=255)
                                                             cACCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATgaga                           <  2:9151284/93‑1 (MQ=255)
                                                              aCCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGagag                          <  1:6466361/93‑1 (MQ=255)
                                                              aCCGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGagag                          >  2:3085482/1‑93 (MQ=255)
                                                               ccGTTCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGt                         >  2:380502/1‑93 (MQ=255)
                                                                  ttCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAAc                      >  2:822732/1‑93 (MQ=255)
                                                                  ttCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAAc                      <  1:468216/93‑1 (MQ=255)
                                                                  ttCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAAc                      >  1:1609642/1‑93 (MQ=255)
                                                                  ttCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAAc                      >  1:813588/1‑93 (MQ=255)
                                                                  ttCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAAc                      >  2:2103315/1‑93 (MQ=255)
                                                                   tCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTGCCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAAcc                     <  1:5405741/93‑1 (MQ=255)
                                                                   tCTGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAAcc                     >  1:5824616/1‑93 (MQ=255)
                                                                     tGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCaa                   <  2:7141858/93‑1 (MQ=255)
                                                                     tGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCaa                   >  1:2969515/1‑93 (MQ=255)
                                                                     tGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCaa                   >  2:8775790/1‑93 (MQ=255)
                                                                     tGATGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCaa                   >  1:7421165/1‑93 (MQ=255)
                                                                       aTGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAg                 <  2:6876603/93‑1 (MQ=255)
                                                                       aTGCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAg                 <  1:7896451/93‑1 (MQ=255)
                                                                         gCTCCCAACCGGCATAAGCCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGa                <  1:8963132/93‑1 (MQ=255)
                                                                         gCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTa                        >  1:4340938/1‑84 (MQ=255)
                                                                         gCTCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGAt               <  2:1652618/93‑1 (MQ=255)
                                                                           tCCCAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCa             >  1:3779644/1‑93 (MQ=255)
                                                                            cccAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGCTCAAAACCAATATCAGAATGAGAGTAAGCAAAGATCaa            >  2:5205792/1‑93 (MQ=255)
                                                                             ccAAGCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAg           >  2:3446272/1‑93 (MQ=255)
                                                                             ccAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAg           <  1:1323023/93‑1 (MQ=255)
                                                                              cAACCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGc          <  2:6035814/93‑1 (MQ=255)
                                                                               aaCCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGcc         >  2:2471394/1‑93 (MQ=255)
                                                                                aCCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCcg        >  2:9645700/1‑93 (MQ=255)
                                                                                aCCGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCcg        >  1:2305227/1‑93 (MQ=255)
                                                                                 ccGGCATAAGCCCCAGGGTATAGCTATTGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCcgc       <  2:1043141/93‑1 (MQ=255)
                                                                                 ccGGCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCcgc       <  2:48554/93‑1 (MQ=255)
                                                                                    gCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGaa    >  1:3711861/1‑93 (MQ=255)
                                                                                    gCATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGaa    >  1:967463/1‑93 (MQ=255)
                                                                                     cATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAAt   >  1:6820387/1‑93 (MQ=255)
                                                                                     cATAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAAt   >  2:1421823/1‑93 (MQ=255)
                                                                                      aTAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAAtt  <  2:8376111/93‑1 (MQ=255)
                                                                                      aTAAGCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAAtt  <  2:4335823/93‑1 (MQ=255)
                                                                                           |                                                                                        
CTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAATT  >  NC_000913/2284894‑2285073

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: