BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,885,561	(C)_5→4	intergenic (‑319/+40)	ygcB ← / ← cysH	hypothetical protein/3'‑phosphoadenosine 5'‑phosphosulfate reductase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,885,557	0	C	.	100.0%	1562.8 / NA	344	intergenic (‑315/+44)	ygcB/cysH	hypothetical protein/3'‑phosphoadenosine 5'‑phosphosulfate reductase
Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (208/136); total (208/136)

Only 100 of 394 total aligned reads displayed.

AGCCTCAAGCACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACG  >  NC_000913/2885465‑2885645

 gCCTCAAGCACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGcc                                                                                         <  1:8268739/93‑1 (MQ=255)

  ccTCAAGCACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGccc                                                                                        >  2:1487386/1‑93 (MQ=255)

   cTCAAGCACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGcccc                                                                                       >  1:6099249/1‑93 (MQ=255)

   cTCAAGCACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGcccc                                                                                       <  1:8076555/93‑1 (MQ=255)

   cTCAAGCACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGcccc                                                                                       <  2:3528842/93‑1 (MQ=255)

    tCAAGCACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGcccca                                                                                      >  2:752775/1‑92 (MQ=255)

     cAAGCACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGccccat                                                                                     <  1:1623869/93‑3 (MQ=255)

     cAAGCACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGccccat                                                                                     >  2:8506949/1‑91 (MQ=255)

     cAAGCACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGccccat                                                                                     >  2:5899109/1‑91 (MQ=255)

     cAAGCACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGccccat                                                                                     <  1:8584604/93‑3 (MQ=255)

     cAAGAACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGccccat                                                                                     >  2:9695714/1‑91 (MQ=255)

     cAAACACCCGGCGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGccccat                                                                                     <  2:8903244/93‑3 (MQ=255)

      aaGCACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGccccatc                                                                                    <  2:7025171/93‑4 (MQ=255)

        gctcccGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCcatcat                                                                                 <  2:4528090/90‑1 (MQ=255)

        gCACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCcatcat                                                                                 <  1:4692459/93‑1 (MQ=255)

        gCACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCcatcat                                                                                 <  1:89535/93‑1 (MQ=255)

        gCACCCGACGCCATTCTATACCTGATAATTCTGCCCGCGGCTTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCcatcat                                                                                 <  1:1456886/93‑1 (MQ=255)

         cACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCAtt                                                                                >  2:7829279/1‑93 (MQ=255)

         cACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCAtt                                                                                <  1:3599153/93‑1 (MQ=255)

           cccGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTc                                                                              >  2:9839011/1‑93 (MQ=255)

           cccGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTc                                                                              >  2:1708082/1‑93 (MQ=255)

                cGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACa                                                                         >  2:6206673/1‑93 (MQ=255)

                 gCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACag                                                                        >  1:2133707/1‑93 (MQ=255)

                  ccATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACaga                                                                       <  2:3875063/93‑1 (MQ=255)

                   cATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACagag                                                                      <  2:137218/93‑1 (MQ=255)

                    aTTTTATACCAGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAgg                                                                     <  1:7259708/93‑1 (MQ=255)

                    aTTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAgg                                                                     >  1:4521881/1‑93 (MQ=255)

                    aTTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAgg                                                                     >  2:6511659/1‑93 (MQ=255)

                     ttCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGc                                                                    >  1:4976656/1‑93 (MQ=255)

                     ttCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGc                                                                    >  1:2957906/1‑93 (MQ=255)

                     ttCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGc                                                                    <  2:7924402/93‑1 (MQ=255)

                       cTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGt                                                                  <  1:5222017/93‑1 (MQ=255)

                        tataCCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGtt                                                                 >  2:7113140/1‑93 (MQ=255)

                        tataCCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGtt                                                                 >  2:6720694/1‑93 (MQ=255)

                         ataCCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGttt                                                                >  1:9945431/1‑93 (MQ=255)

                          taCCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTa                                                               >  2:9628924/1‑93 (MQ=255)

                          taCCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTa                                                               >  1:5890250/1‑93 (MQ=255)

                           aCCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTaa                                                              <  2:7244261/93‑1 (MQ=255)

                             cTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAAtt                                                            <  2:8215775/93‑1 (MQ=255)

                              tGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAAttt                                                           >  1:2736567/1‑93 (MQ=255)

                              tGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAAttt                                                           >  2:1863058/1‑93 (MQ=255)

                                aTAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGt                                                         >  1:5550512/1‑93 (MQ=255)

                                 tAATTCTTCCCGCGGCGTTCACGCTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTc                                                        <  2:5494389/93‑1 (MQ=255)

                                  aaTTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTcc                                                       <  2:5381709/93‑1 (MQ=255)

                                  aaTTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTcc                                                       >  2:2845432/1‑93 (MQ=255)

                                   aTTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCg                                                      <  1:3446651/93‑1 (MQ=255)

                                    ttcttcCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCgg                                                     >  1:2455791/1‑93 (MQ=255)

                                    ttcttcCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCgg                                                     <  2:662609/93‑1 (MQ=255)

                                     tcttcCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGc                                                    >  2:5266562/1‑93 (MQ=255)

                                       ttcCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCaa                                                  >  1:2272941/1‑93 (MQ=255)

                                         cccGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAata                                                <  2:1043028/93‑1 (MQ=255)

                                         cccGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAata                                                >  1:3355000/1‑93 (MQ=255)

                                           cgcgGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATAtt                                              <  2:230515/93‑1 (MQ=255)

                                           cgcgGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATAtt                                              >  1:6647924/1‑93 (MQ=255)

                                           cgcgGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATAtt                                              <  2:9231901/93‑1 (MQ=255)

                                            gcggcgTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATAttt                                             >  2:9402958/1‑93 (MQ=255)

                                            gcggcgTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATAttt                                             >  1:9192552/1‑93 (MQ=255)

                                             cggcgTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTa                                            <  1:5706855/93‑1 (MQ=255)

                                             cggcgTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTa                                            >  1:8999925/1‑93 (MQ=255)

                                              ggcgTTCACGTTTAAAATCAGGAATGCTGCTCGCAATATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTAc                                           <  1:1222031/93‑1 (MQ=255)

                                              ggcgTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTAc                                           >  1:4012108/1‑93 (MQ=255)

                                               gcgTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTAcc                                          >  1:9735924/1‑93 (MQ=255)

                                               gcgTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTAcc                                          <  1:3801190/93‑1 (MQ=255)

                                               gcgTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTAcc                                          <  2:7692092/93‑1 (MQ=255)

                                                 gTTCACGTTTAAAATCAGGAATGGTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCt                                        >  1:174889/1‑93 (MQ=255)

                                                 gTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCt                                        >  2:6047914/1‑93 (MQ=255)

                                                  ttCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCtt                                       >  2:3480460/1‑93 (MQ=255)

                                                  ttCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCtt                                       <  2:833385/93‑1 (MQ=255)

                                                  ttCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCtt                                       >  1:7472417/1‑93 (MQ=255)

                                                   tCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTc                                      <  2:4671245/93‑1 (MQ=255)

                                                       gTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCgtgt                                  >  2:2806198/1‑93 (MQ=255)

                                                        tttAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTa                                 >  2:3031935/1‑93 (MQ=255)

                                                        tttAAAATCAGGAACGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTa                                 >  1:9305735/1‑93 (MQ=255)

                                                         taaaaaTCAGGAATTCCGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTaa                                <  2:8620437/91‑1 (MQ=255)

                                                          tAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAAc                               >  1:8462545/1‑93 (MQ=255)

                                                          tAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAAc                               <  2:90020/93‑1 (MQ=255)

                                                           aaaaTCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAAcc                              <  2:8303168/93‑1 (MQ=255)

                                                             aaTCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCca                            >  2:4863394/1‑93 (MQ=255)

                                                               tCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCcaca                          >  2:9072054/1‑93 (MQ=255)

                                                               tCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCcaca                          >  1:1116516/1‑93 (MQ=255)

                                                                cAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACAt                         >  2:4712661/1‑93 (MQ=255)

                                                                  ggAATGCTTCTCGCAAAATAAAAACG‑CCCCATCATTGCTGACAAAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTc                       <  2:7801640/93‑1 (MQ=255)

                                                                  ggAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTc                       >  1:6422569/1‑93 (MQ=255)

                                                                   gAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTcc                      >  1:7626785/1‑93 (MQ=255)

                                                                   gAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTcc                      <  2:3184498/93‑1 (MQ=255)

                                                                      tgctgcTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCtt                   >  2:3756674/1‑93 (MQ=255)

                                                                        ctgctCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCtttt                 >  2:553412/1‑93 (MQ=255)

                                                                        ctgctCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCtttt                 >  1:5110052/1‑93 (MQ=255)

                                                                         tgctCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCttttt                >  2:4090987/1‑93 (MQ=255)

                                                                          gctCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTa               <  1:3189246/93‑1 (MQ=255)

                                                                           ctCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTaa              <  1:8816074/93‑1 (MQ=255)

                                                                             cGCAAAATAAAAACG‑CACCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGc            <  2:4327631/93‑1 (MQ=255)

                                                                              gCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGcc           >  1:2849304/1‑93 (MQ=255)

                                                                               cAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCa          >  1:1989143/1‑93 (MQ=255)

                                                                                aaaaTAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCaa         >  2:3934318/1‑93 (MQ=255)

                                                                                aaaaTAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCaa         >  1:699723/1‑93 (MQ=255)

                                                                                 aaaTAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCaaa        >  1:9557857/1‑93 (MQ=255)

                                                                                  aaTAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCaaaa       >  1:252181/1‑92 (MQ=255)

                                                                                    tAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGaa     >  1:1086807/1‑93 (MQ=255)

                                                                                     aaaaaCG‑CCCCTTCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGaaa    <  2:2023511/93‑1 (MQ=255)

AGCCTCAAGCACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACG  >  NC_000913/2885465‑2885645

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`