Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,077,514 Δ1 bp intergenic (‑165/+149) cmtB ← / ← tktA PTS system mannitol‑specific enzyme IIA component/transketolase 1 isozyme

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,077,5130C.100.0% 1918.6 / NA 417intergenic (‑164/+150)cmtB/tktAPTS system mannitol‑specific enzyme IIA component/transketolase 1 isozyme
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base . (241/176);  total (241/176)

Only 100 of 438 total aligned reads displayed.

GCAATTGAGCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATACCGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGC  >  NC_000913/3077421‑3077601
                                                                                            |                                                                                        
gCAATTGAGCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATAc                                                                                          >  1:9700154/1‑93 (MQ=255)
   aTTGAGCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATAcgca                                                                                       >  1:5064462/1‑90 (MQ=255)
   aTTGAGCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATAcgca                                                                                       >  2:1994155/1‑90 (MQ=255)
   aTTGAGCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATAcgca                                                                                       >  2:5818404/1‑90 (MQ=255)
    ttGAGCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATAcgcat                                                                                      >  2:4563437/1‑89 (MQ=255)
      gAGCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCatat                                                                                   <  1:9306958/93‑1 (MQ=255)
      gAGCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCatat                                                                                   <  1:7775498/93‑1 (MQ=255)
          aGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTg                                                                               >  2:7466568/1‑93 (MQ=255)
          aGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTg                                                                               >  2:2856882/1‑93 (MQ=255)
           gggAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGa                                                                              >  2:9736143/1‑93 (MQ=255)
           gggAAACCGGTGTTTTGAAAACAGTGAACTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGa                                                                              >  2:5998457/1‑93 (MQ=255)
              aaaCCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGc                                                                           >  1:8326201/1‑93 (MQ=255)
                aCCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCat                                                                         >  2:8933647/1‑93 (MQ=255)
                 ccGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCata                                                                        <  2:6628612/93‑1 (MQ=255)
                 ccGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCata                                                                        >  1:1592173/1‑93 (MQ=255)
                 ccGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCata                                                                        <  1:4486490/93‑1 (MQ=255)
                   ggTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATAtt                                                                      >  2:1765396/1‑93 (MQ=255)
                     tgtTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTAc                                                                    >  2:6178157/1‑93 (MQ=255)
                      gtTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACa                                                                   <  1:1361157/93‑1 (MQ=255)
                       ttttGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACAt                                                                  <  2:5212690/93‑1 (MQ=255)
                        tttGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATa                                                                 >  1:8784535/1‑93 (MQ=255)
                           gAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAAtt                                                              >  1:417885/1‑93 (MQ=255)
                                cAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGatat                                                         >  1:6330804/1‑93 (MQ=255)
                                cAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGatat                                                         <  2:5343081/93‑1 (MQ=255)
                                 aGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGAtatt                                                        <  1:8494017/93‑1 (MQ=255)
                                  gTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGAtattt                                                       <  1:1768546/93‑1 (MQ=255)
                                  gTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGAtattt                                                       >  1:627655/1‑93 (MQ=255)
                                   tGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGAtattta                                                      <  2:7753067/93‑1 (MQ=255)
                                   tGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGAtattta                                                      >  2:7543124/1‑93 (MQ=255)
                                   tGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGAtattta                                                      >  1:7152275/1‑93 (MQ=255)
                                   tGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGAtattta                                                      <  2:4930219/93‑1 (MQ=255)
                                    gAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGAtatttat                                                     <  2:4417763/93‑1 (MQ=255)
                                    gAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGAtatttat                                                     <  1:9179609/93‑1 (MQ=255)
                                    gAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGAtatttat                                                     <  1:2548600/93‑1 (MQ=255)
                                    gAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGAATATCGTGATGCATATTACATAATTGAtatttat                                                     >  2:1203847/1‑93 (MQ=255)
                                     aaTTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGAtatttatt                                                    >  1:8071050/1‑93 (MQ=255)
                                     aaTTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGAtatttatt                                                    <  1:5370627/93‑1 (MQ=255)
                                      attattAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTg                                                   <  2:1635219/93‑1 (MQ=255)
                                       ttattaATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGc                                                  >  2:8063070/1‑93 (MQ=255)
                                        tattaATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCa                                                 >  2:7219748/1‑93 (MQ=255)
                                        tattaATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCa                                                 >  2:2368324/1‑93 (MQ=255)
                                          ttaATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CTCATATCGTGATGCATATTACATAATTGATATTTATTGCata                                               >  1:7436357/1‑93 (MQ=255)
                                            aaTTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCAtata                                             >  2:467228/1‑93 (MQ=255)
                                              tttCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATaaa                                           <  2:5646342/93‑1 (MQ=255)
                                              tttCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATaaa                                           <  2:8616469/93‑1 (MQ=255)
                                              tttCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATaaa                                           <  2:2227381/93‑1 (MQ=255)
                                              tttCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATaaa                                           >  1:1042026/1‑93 (MQ=255)
                                              tttCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATaaa                                           >  1:3719189/1‑93 (MQ=255)
                                               ttCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAat                                          >  2:5514554/1‑93 (MQ=255)
                                               ttCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAat                                          >  2:5957755/1‑93 (MQ=255)
                                               ttCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAat                                          <  2:6311142/93‑1 (MQ=255)
                                                 cTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAatat                                        >  1:9880042/1‑93 (MQ=255)
                                                 cTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAatat                                        <  2:147957/93‑1 (MQ=255)
                                                  ttATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCCTATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATAtt                                       >  1:3839393/1‑93 (MQ=255)
                                                  ttATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATAtt                                       >  1:5268024/1‑93 (MQ=255)
                                                   tatataACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATAttt                                      >  1:946053/1‑93 (MQ=255)
                                                      ataACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTtgtg                                   >  1:6655232/1‑93 (MQ=255)
                                                      ataACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTtgtg                                   <  1:9614754/93‑1 (MQ=255)
                                                       taACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGa                                  >  2:30278/1‑93 (MQ=255)
                                                       taACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGa                                  >  1:5834309/1‑93 (MQ=255)
                                                        aaCATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGAt                                 <  2:4084871/93‑1 (MQ=255)
                                                         aCATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATc                                >  1:5960073/1‑93 (MQ=255)
                                                         aCATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATc                                >  1:5567288/1‑93 (MQ=255)
                                                          cATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCt                               <  1:4888152/93‑1 (MQ=255)
                                                          cATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCt                               >  2:7798810/1‑93 (MQ=255)
                                                          cATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTAATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTAATCt                               <  2:2080285/93‑1 (MQ=255)
                                                           aTTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTa                              >  2:8773209/1‑93 (MQ=255)
                                                            ttGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTaa                             >  1:7671144/1‑92 (MQ=255)
                                                            atGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTac                             <  1:3439338/92‑1 (MQ=255)
                                                             tGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTaca                            <  1:1819887/93‑1 (MQ=255)
                                                                gTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTacaaca                         >  1:5458746/1‑93 (MQ=255)
                                                                gTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTacaaca                         >  1:6780439/1‑93 (MQ=255)
                                                                gTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTacaaca                         <  1:1480994/93‑1 (MQ=255)
                                                                gTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTacaaca                         <  2:8244826/93‑1 (MQ=255)
                                                                  tataGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACg                       >  1:2833721/1‑93 (MQ=255)
                                                                   ataGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGc                      >  2:5077206/1‑93 (MQ=255)
                                                                   ataGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGc                      >  2:3797215/1‑93 (MQ=255)
                                                                    taGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGcc                     >  2:922916/1‑93 (MQ=255)
                                                                    taGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGcc                     <  2:966325/93‑1 (MQ=255)
                                                                      gATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCtt                   >  2:4296238/1‑93 (MQ=255)
                                                                      gATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCtt                   >  2:2688914/1‑93 (MQ=255)
                                                                       atatAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTa                  <  2:4248559/93‑1 (MQ=255)
                                                                        tatgACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTAt                 <  2:3391328/93‑1 (MQ=255)
                                                                         ataACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATc                >  2:3316617/1‑93 (MQ=255)
                                                                          taACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCt               >  1:7196864/1‑93 (MQ=255)
                                                                           aacaacAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTa              >  1:97549/1‑93 (MQ=255)
                                                                            acaacaAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTAt             >  2:6544854/1‑93 (MQ=255)
                                                                            acaacaAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTAt             <  1:3053935/93‑1 (MQ=255)
                                                                            acaacaAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATACTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTAt             <  1:2762879/93‑1 (MQ=255)
                                                                              aacaaATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTAttc           >  1:206431/1‑92 (MQ=255)
                                                                                caaATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCt         >  2:3592949/1‑93 (MQ=255)
                                                                                 aaaTGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCtt        >  2:2991644/1‑93 (MQ=255)
                                                                                 aaaTGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCtt        >  2:7408863/1‑93 (MQ=255)
                                                                                  aaTGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATACATATTTGTGATCTACAACACGCCTTATCTATTGCTTg       >  2:10047647/1‑93 (MQ=255)
                                                                                  aaTGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTg       >  2:9040003/1‑93 (MQ=255)
                                                                                  aaTGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTg       >  1:6864205/1‑93 (MQ=255)
                                                                                   aTGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGt      >  1:1952481/1‑93 (MQ=255)
                                                                                    tGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTc     >  2:8464380/1‑93 (MQ=255)
                                                                                    tGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTc     <  1:3315217/93‑1 (MQ=255)
                                                                                      tCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCg   >  1:4662291/1‑93 (MQ=255)
                                                                                            |                                                                                        
GCAATTGAGCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATACCGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGC  >  NC_000913/3077421‑3077601

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑