BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,236,758	Δ1 bp	coding (537/966 nt)	ygjT →	putative transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,236,757	0	T	.	100.0%	1462.9 / NA	323	coding (536/966 nt)	ygjT	putative transport protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (151/172); total (151/172)

Only 100 of 347 total aligned reads displayed.

GCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑C‑GCTGGTGCGCTGGCTACGCGGTTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGCTGGTA  >  NC_000913/3236666‑3236845

 ccTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGGtc                                                                                         >  2:4218727/1‑92 (MQ=255)

  cTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGGtca                                                                                        >  2:9546243/1‑91 (MQ=255)

    tCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCCTTGGCGACAAGCC‑GCTGGCGCGCTGGCTACGCGGtcatt                                                                                      >  1:7596500/1‑89 (MQ=255)

    tCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGGtcatt                                                                                      >  1:6662483/1‑89 (MQ=255)

     ccTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCAttt                                                                                    <  1:726028/93‑1 (MQ=255)

      ctgctgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTg                                                                                   >  2:7903639/1‑93 (MQ=255)

       tgctgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTgc                                                                                  >  2:1592131/1‑93 (MQ=255)

         ctgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTgcgc                                                                                >  2:564951/1‑93 (MQ=255)

          tgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCa                                                                               <  1:3484021/93‑1 (MQ=255)

          tgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCa                                                                               >  2:1873228/1‑93 (MQ=255)

           gTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCAt                                                                              <  1:2883577/93‑1 (MQ=255)

            tttACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATg                                                                             <  1:9960673/93‑1 (MQ=255)

            tttACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATg                                                                             >  2:7014225/1‑93 (MQ=255)

            tttACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATg                                                                             >  1:8175663/1‑93 (MQ=255)

             ttACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGa                                                                            <  2:3138258/93‑1 (MQ=255)

              tACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGAc                                                                           <  2:6924054/93‑1 (MQ=255)

              tACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGAc                                                                           <  1:6382542/93‑1 (MQ=255)

              tACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGAc                                                                           <  1:4371146/93‑1 (MQ=255)

                 cGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGa                                                                        <  2:7650212/93‑1 (MQ=255)

                     gTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACAcc                                                                    <  1:4970803/93‑1 (MQ=255)

                     gTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACAcc                                                                    <  1:9822921/93‑1 (MQ=255)

                     gTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACAcc                                                                    <  1:2455402/93‑1 (MQ=255)

                      tGAAGATGGCGCTCGCCCATGAAGATGAATCAGTCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCa                                                                   <  1:5725665/93‑1 (MQ=255)

                      tGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCa                                                                   >  2:3064553/1‑93 (MQ=255)

                      tGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCa                                                                   >  1:6294450/1‑93 (MQ=255)

                        aaGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATc                                                                 <  1:8914517/93‑1 (MQ=255)

                         aGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCg                                                                >  2:8605809/1‑93 (MQ=255)

                          gATGGCGCCCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGa                                                               <  2:2560323/93‑1 (MQ=255)

                          aaTGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGa                                                               <  2:7316749/92‑1 (MQ=255)

                           aTGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGAc                                                              >  1:4187283/1‑93 (MQ=255)

                             ggCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACaa                                                            <  2:4831107/93‑1 (MQ=255)

                             ggCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACaa                                                            <  2:386374/93‑1 (MQ=255)

                             ggCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACaa                                                            <  1:7739359/93‑1 (MQ=255)

                             ggCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACaa                                                            <  2:9794316/93‑1 (MQ=255)

                             ggCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACaa                                                            <  1:3037710/93‑1 (MQ=255)

                              gcgcTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAAc                                                           <  2:7979043/93‑1 (MQ=255)

                               cgcTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACg                                                          >  1:5367610/1‑93 (MQ=255)

                                gcTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGa                                                         <  1:5654166/93‑1 (MQ=255)

                                  tCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑GCATTTGCGCATGACCGACACCAGCGACAACGAGc                                                       >  2:6302893/1‑93 (MQ=255)

                                   cGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCa                                                      <  2:1464934/93‑1 (MQ=255)

                                   cGCCCATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCa                                                      <  2:4355311/93‑1 (MQ=255)

                                     cccATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCAtt                                                    <  2:8207440/93‑1 (MQ=255)

                                     cccATGAAGATAAATCAGGCTTTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCAtt                                                    <  2:357942/93‑1 (MQ=255)

                                       cATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTc                                                  >  2:2960581/1‑93 (MQ=255)

                                       cATGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTc                                                  >  2:3537341/1‑93 (MQ=255)

                                         tGAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCtt                                                >  1:1782597/1‑93 (MQ=255)

                                          gAAGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCttt                                               >  1:4897784/1‑93 (MQ=255)

                                          gAAAATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCttt                                               <  2:6896614/93‑1 (MQ=255)

                                           aaGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTtg                                              >  2:2633611/1‑93 (MQ=255)

                                           aaGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTtg                                              >  1:3239422/1‑93 (MQ=255)

                                           aaGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTtg                                              <  1:2593332/93‑1 (MQ=255)

                                           aaGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTtg                                              >  2:6519120/1‑93 (MQ=255)

                                            aGATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTtgt                                             >  1:3634231/1‑93 (MQ=255)

                                             gATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTtgtg                                            >  1:4708925/1‑93 (MQ=255)

                                             gATGAATCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTtgtg                                            >  1:7142045/1‑93 (MQ=255)

                                                 aaTCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTa                                        >  1:1217288/1‑93 (MQ=255)

                                                 aaTCAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTa                                        >  2:3406911/1‑93 (MQ=255)

                                                   tCAGGCATTGGCGACAAG‑CAGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAg                                      >  1:9471906/1‑93 (MQ=255)

                                                    cAGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGa                                     >  1:2181642/1‑93 (MQ=255)

                                                     aGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGaa                                    >  2:515341/1‑93 (MQ=255)

                                                     aGGCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGaa                                    >  1:7376562/1‑93 (MQ=255)

                                                      ggCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCCCATCACCGACACCATCGACCACGAGCATTTCTTTGTGGGTAAGaag                                   >  2:2399826/1‑92 (MQ=255)

                                                       gCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATg                                  <  2:7598555/93‑1 (MQ=255)

                                                       gCATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATg                                  <  1:5924132/93‑1 (MQ=255)

                                                        cATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATgg                                 <  2:6105581/93‑1 (MQ=255)

                                                        cATTGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATgg                                 <  1:1061856/93‑1 (MQ=255)

                                                          ttGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCGTTTCTTTGTGCGTAAGAATGGAt                               >  2:7217021/1‑93 (MQ=255)

                                                          ttGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAt                               >  1:8214474/1‑93 (MQ=255)

                                                          ttGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAt                               <  2:5216200/93‑1 (MQ=255)

                                                          ttGGCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAt                               >  1:8608062/1‑93 (MQ=255)

                                                             gCGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGc                            >  1:699785/1‑93 (MQ=255)

                                                              cGACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCt                           <  1:388194/93‑1 (MQ=255)

                                                               gACAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTg                          >  2:2052866/1‑93 (MQ=255)

                                                                aCAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGt                         >  1:1007473/1‑93 (MQ=255)

                                                                aCAAGCC‑GCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGt                         >  2:9432078/1‑93 (MQ=255)

                                                                  aagcc‑gcTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTAc                       >  1:8998195/5‑93 (MQ=255)

                                                                  aagcc‑gcTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTAc                       >  2:4041222/5‑93 (MQ=255)

                                                                   agcc‑gcTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGAATTTCTTTGTGCGTAAGAATGGATTGATGTAcc                      >  1:5233489/4‑92 (MQ=255)

                                                                    gcc‑gcTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGc                     >  2:5444078/3‑93 (MQ=255)

                                                                     cc‑gcTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGcc                    >  1:919616/2‑93 (MQ=255)

                                                                      c‑gcTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCca                   <  2:4689470/93‑1 (MQ=255)

                                                                        gcTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCcac                  <  2:2754396/93‑1 (MQ=255)

                                                                        gcTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCcac                  >  1:1586143/1‑93 (MQ=255)

                                                                          tGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCacac                >  2:9116795/1‑93 (MQ=255)

                                                                          tGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCacac                <  2:8125476/93‑1 (MQ=255)

                                                                           ggTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACAcc               >  1:6104716/1‑93 (MQ=255)

                                                                             tGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGc             >  1:1516471/1‑93 (MQ=255)

                                                                                gcTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGa          <  1:3341125/93‑1 (MQ=255)

                                                                                gcTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGa          <  1:5535320/93‑1 (MQ=255)

                                                                                  tGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCCCACCGCTGAtc        >  1:6473224/1‑92 (MQ=255)

                                                                                  tGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATg        <  2:596782/93‑1 (MQ=255)

                                                                                  tGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATg        >  1:575970/1‑93 (MQ=255)

                                                                                  tGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATg        >  1:63983/1‑93 (MQ=255)

                                                                                  tGGCTACGCGG‑ACATTTGCGCATGACCGACACCATCCATAACCTGCATTTTTTTGTCCGTAAGAATGGATTGCCTTACGCCGCACCGCTGAtc        >  2:8500224/1‑92 (MQ=255)

                                                                                   ggCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGc       <  1:8459890/93‑1 (MQ=255)

                                                                                     cTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGCTg     >  1:2306706/1‑93 (MQ=255)

                                                                                      tACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGCTgg    <  1:1874423/93‑1 (MQ=255)

                                                                                      tACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGCTgg    >  1:9375689/1‑93 (MQ=255)

                                                                                       aCGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGCTGGt   <  1:4272051/93‑1 (MQ=255)

                                                                                       aCGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGCTGGt   >  2:4009100/1‑93 (MQ=255)

GCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑C‑GCTGGTGCGCTGGCTACGCGGTTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCACACCGCTGATGCTGGTA  >  NC_000913/3236666‑3236845

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`