Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,704,229 (T)5→4 coding (1106/1608 nt) dppA ← dipeptide transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,704,2250T.99.5% 1969.6 / ‑0.3 435coding (1110/1608 nt)dppAdipeptide transport protein
Reads supporting (aligned to +/- strand):  ref base T (1/0);  major base . (247/184);  minor base C (0/2);  total (248/187)
Fisher's exact test for biased strand distribution p-value = 1.84e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.23e-01

Only 100 of 496 total aligned reads displayed.

GCCCAGTCTGCCTGAATCATCTCCGCCATGCGGCGAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGTAGGTGTAGTCCTGAACGTCGTCGTTATAGCCCCACATGG  >  NC_000913/3704133‑3704313
                                                                                            |                                                                                        
  ccAGTCTGCCTGAATCATCTCCGCCATGCGGCGAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCttt                                                                                        <  1:549950/93‑1 (MQ=255)
  ccAGTCTGCCTGAATCATCTCCGCCATGCGGCGAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCttt                                                                                        <  1:6418347/93‑1 (MQ=255)
   cAGTCTGCCTGAATCATCTCCGCCATGCGGCGAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCtttt                                                                                       >  2:7051132/1‑93 (MQ=255)
   cAGTCTGCCTGAATCATCTCCGCCATGCGGCGAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCtttt                                                                                       >  1:6860664/1‑93 (MQ=255)
      tCTGCCTGAATCATCTCCGCCATGCGGCGAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCttttcca                                                                                    <  1:2507690/93‑4 (MQ=255)
      tCTGCCTGAATCATCTCCGCCATGCGGCGAGCGTTCGGGTTATACGGACGTGGTACCGGCATCGCCCACAGGTCGATGGAGAAACCttttcca                                                                                    >  1:5916821/1‑90 (MQ=255)
       cTGCCTGAATCATCTCCGCCATGCGGCGAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCttttccag                                                                                   >  1:4974452/1‑89 (MQ=255)
        tGCCTGAATCATCTCCGCCATGCGGCGAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGa                                                                                 <  2:3805088/93‑1 (MQ=255)
        tGCCTGAATCATCTCCGCCATGCGGCGAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGa                                                                                 <  2:2417227/93‑1 (MQ=255)
        tGCCTGAATCATCTCCGCCATGCGGCGAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGa                                                                                 >  1:2928060/1‑93 (MQ=255)
         gCCTGAATCATCTCCGCCATGCGGCGAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGAc                                                                                >  2:3509691/1‑93 (MQ=255)
           cTGAATCATCTCCGCCATGCGGCGAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACATTTTCCAGAccc                                                                              <  2:3237201/93‑1 (MQ=255)
            tGAATCATCTCCGCCATGCGGCGAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCg                                                                             >  1:2801980/1‑93 (MQ=255)
            tGAATCATCTCCGCCATGCGGCGAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCg                                                                             >  2:1587654/1‑93 (MQ=255)
            tGAATCATCTCCGCCATGCGGCGAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCg                                                                             >  1:3039470/1‑93 (MQ=255)
             gAATCATCTCCGCCATGCGGCGAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGc                                                                            <  2:2686016/93‑1 (MQ=255)
             gAATCATCTCCGCCATGCGGCGAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGc                                                                            >  1:1487831/1‑93 (MQ=255)
              aaTCATCTCCGCCATGCGGCGAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGct                                                                           <  1:3219755/93‑1 (MQ=255)
              aaTCATCTCCGCCATGCGGCGAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGct                                                                           <  2:6755501/93‑1 (MQ=255)
                tcatcTCCGCCATGCGGCGAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGcttc                                                                         <  1:670416/93‑1 (MQ=255)
                tcatcTCCGCCATGCGGCGAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGcttc                                                                         >  2:9845184/1‑93 (MQ=255)
                  atcTCCGCCATGCGGCGAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGcttctt                                                                       <  1:9072156/93‑1 (MQ=255)
                   tctcCGCCATGCGGCGAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCttt                                                                      >  1:111672/1‑93 (MQ=255)
                    ctcCGCCATGCGGCGAGCGTTCGGGTTATACGGTCGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTc                                                                     <  1:4737157/93‑1 (MQ=255)
                    ctcCGCCATGCGGCGAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTc                                                                     <  2:5353390/93‑1 (MQ=255)
                     tcCGCCATGCGGCGAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCa                                                                    >  1:8766735/1‑93 (MQ=255)
                      ccGCCATGCGGCGAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAg                                                                   >  1:9906376/1‑93 (MQ=255)
                         ccctGCGGCGAGCGTTCGGGTTGTGCGGACGTTGTACCGGCCTCGCCCACAGGTCGATGGAGAACCCTTTTCCAGCCCCGCTTCTTTCAGCaa                                                                <  1:7712479/90‑1 (MQ=255)
                         ccATGCGGCGAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCaa                                                                >  2:9376286/1‑93 (MQ=255)
                            tGCGGCGAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGc                                                             >  2:6679405/1‑93 (MQ=255)
                            tGCGGCGAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGc                                                             >  1:5586621/1‑93 (MQ=255)
                            tGCGGCGAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGc                                                             <  1:5735313/93‑1 (MQ=255)
                            tGCGGCGAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGc                                                             >  1:3611670/1‑93 (MQ=255)
                            tGCGGCGAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGc                                                             >  2:2031547/1‑93 (MQ=255)
                              cggcgAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCtt                                                           <  1:7302646/93‑1 (MQ=255)
                                gcgAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTc                                                         >  2:4879092/1‑93 (MQ=255)
                                gcgAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTc                                                         <  1:1920130/93‑1 (MQ=255)
                                 cgAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCg                                                        <  1:9394671/93‑1 (MQ=255)
                                  gAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGc                                                       <  1:6118105/93‑1 (MQ=255)
                                    gCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAACCCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCtt                                                     <  1:429524/93‑1 (MQ=255)
                                     cGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCttt                                                    >  2:7204408/1‑93 (MQ=255)
                                      gTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCtttt                                                   <  2:792426/93‑1 (MQ=255)
                                       ttCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCttttt                                                  >  2:8789162/1‑93 (MQ=255)
                                       ttCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCttttt                                                  >  1:5399195/1‑93 (MQ=255)
                                       ttCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCttttt                                                  >  1:8549623/1‑93 (MQ=255)
                                        tCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTc                                                 <  1:799802/93‑1 (MQ=255)
                                        tCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTc                                                 <  2:7651438/93‑1 (MQ=255)
                                        tCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTc                                                 <  1:7204184/93‑1 (MQ=255)
                                          gggTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAg                                               >  2:8113068/1‑93 (MQ=255)
                                          gggTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAg                                               <  1:4228294/93‑1 (MQ=255)
                                          gggTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAg                                               <  1:845499/93‑1 (MQ=255)
                                           ggTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAgg                                              >  1:8908002/1‑93 (MQ=255)
                                            gTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAggt                                             >  2:8291120/1‑92 (MQ=255)
                                            gTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGa                                             >  2:5759084/1‑93 (MQ=255)
                                             ttATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGAt                                            <  1:7541317/93‑1 (MQ=255)
                                             ttATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGAt                                            <  1:3110517/93‑1 (MQ=255)
                                              tataCGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATc                                           >  1:9641763/1‑93 (MQ=255)
                                              tataCGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATc                                           >  1:8328808/1‑93 (MQ=255)
                                               ataCGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCg                                          >  1:3374661/1‑93 (MQ=255)
                                                taCGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGt                                         >  2:8603480/1‑93 (MQ=255)
                                                taCGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGt                                         >  1:3454208/1‑93 (MQ=255)
                                                taCGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGt                                         <  2:2942476/93‑1 (MQ=255)
                                                taCGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGt                                         >  1:3959435/1‑93 (MQ=255)
                                                 aCGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGTa                                        >  2:6048687/1‑93 (MQ=255)
                                                  cGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAGCCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGTAg                                       <  1:4811666/93‑1 (MQ=255)
                                                  cGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCACGATCGTAg                                       >  1:5131277/1‑93 (MQ=255)
                                                   ggACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGTAgg                                      >  2:7975533/1‑93 (MQ=255)
                                                   ggACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGTAgg                                      <  2:1022358/93‑1 (MQ=255)
                                                      cGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGTAGgtgt                                   >  2:6267643/1‑93 (MQ=255)
                                                      cGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCGTGTTCAGGATCGGAGgtgt                                   >  2:8954500/1‑93 (MQ=255)
                                                        ttGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGTAGGTGTAg                                 <  2:9742289/93‑1 (MQ=255)
                                                         tGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGTAGGTGTAGt                                >  1:2670389/1‑93 (MQ=255)
                                                          gTACCGGCATCGCACACAGCTCGATGGAGAACCCTTTTCCAGACCCGCTTCTTTCAGCAGGGCTTTCGCTCTTTCAGGATCGTAGGTGTAGTc                               <  2:5023330/93‑1 (MQ=255)
                                                           tACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGTAGGTGTAGTcc                              >  1:2166250/1‑93 (MQ=255)
                                                               ggCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGTAGGTGTAGTCCTGaa                          <  1:3809681/93‑1 (MQ=255)
                                                               ggCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGTAGGTGTAGTCCTGaa                          >  1:7081451/1‑93 (MQ=255)
                                                                gCATCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGTAGGTGTAGTCCTGAAc                         <  2:7427976/93‑1 (MQ=255)
                                                                  aTCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGTAGGTGTAGTCCTGAAcgt                       <  2:7833685/93‑1 (MQ=255)
                                                                   tCGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGTAGGTGTAGTCCTGAAcgtc                      >  2:6579543/1‑93 (MQ=255)
                                                                    cGCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGTAGGTGTAGTCCTGAAcgtcg                     <  2:5171940/93‑1 (MQ=255)
                                                                     gCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGTAGGTGTAGTCCTGAAcgtcgt                    >  1:4556447/1‑93 (MQ=255)
                                                                     gCCCACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGTAGGTGTAGTCCTGAAcgtcgt                    >  2:5979301/1‑93 (MQ=255)
                                                                      cccACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGTAGGTGTAGTCCTGAAcgtcgtc                   <  1:243983/93‑1 (MQ=255)
                                                                      cccACAGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGTAGGTGTAGTCCTGAAcgtcgtc                   <  1:1810638/93‑1 (MQ=255)
                                                                          caGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGTAGGTGTAGTCCTGAACGTCGTCGTta               >  1:1654082/1‑93 (MQ=255)
                                                                          caGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGTAGGTGTAGTCCTGAACGTCGTCGTta               <  1:9171036/93‑1 (MQ=255)
                                                                          caGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGTAGGTGTAGTCCTGAACGTCGTCGTta               >  2:4070513/1‑93 (MQ=255)
                                                                          caGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGTAGGTGTAGTCCTGAACGTCGTCGTta               <  2:1466130/93‑1 (MQ=255)
                                                                           aGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGTAGGTGTAGTCCTGAACGTCGTCGTtat              <  2:6427440/93‑1 (MQ=255)
                                                                           aGGTCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGTAGGTGTAGTCCTGAACGTCGTCGTtat              >  2:4842758/1‑93 (MQ=255)
                                                                           aGGTCGATGGAGAACCCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGTAGGTGTAGTCCTGAACGTCGTCGTtat              <  2:1227076/93‑1 (MQ=255)
                                                                              tCGATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGTAGGTGTAGTCCTGAACGTCGTCGTTATAGc           >  2:8369796/1‑93 (MQ=255)
                                                                                gATGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGTAGGTGTAGTCCTGAACGTCGTCGTTATAGccc         >  2:46849/1‑93 (MQ=255)
                                                                                 aTGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGTAGGTGTAGTCCTGAACGTCGTCGTTATAGcccc        <  2:1924765/93‑1 (MQ=255)
                                                                                  tGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGTAGGTGTAGTCCTGAACGTCGTCGTTATAGCCCca       >  2:368168/1‑93 (MQ=255)
                                                                                  tGGAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGTAGGTGTAGTCCTGAACGTCGTCGTTATAGCCCca       >  1:6235176/1‑93 (MQ=255)
                                                                                   ggAGAAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGTGGGTGTAGTCCTGAACGTCGTGGTTATAGCCCcac      >  1:155589/1‑93 (MQ=255)
                                                                                    gagaAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGTAGGTGTAGTCCTGAACGTCGTCGTTATAGCCCcaca     >  2:9599229/1‑93 (MQ=255)
                                                                                      gaAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGTAGGTGTAGTCCTGAACGTCGTCGTTATAGCCCCACATg   <  2:9425836/93‑1 (MQ=255)
                                                                                      gaAACCTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGTAGGTGTAGTCCTGAACGTCGTCGTTATAGCCCCACATg   >  1:10046467/1‑93 (MQ=255)
                                                                                            |                                                                                        
GCCCAGTCTGCCTGAATCATCTCCGCCATGCGGCGAGCGTTCGGGTTATACGGACGTTGTACCGGCATCGCCCACAGGTCGATGGAGAAACCTTTTTCCAGACCCGCTTCTTTCAGCAAGGCTTTCGCTTTTTCAGGATCGTAGGTGTAGTCCTGAACGTCGTCGTTATAGCCCCACATGG  >  NC_000913/3704133‑3704313

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: