| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,957,124 | +G | intergenic (+58/+26) | ilvC → / ← ppiC | ketol‑acid reductoisomerase/peptidyl‑prolyl cis‑trans isomerase C |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,957,123 | 1 | . | G | 99.3% | 787.6 / ‑2.3 | 271 | intergenic (+57/+27) | ilvC/ppiC | ketol‑acid reductoisomerase/peptidyl‑prolyl cis‑trans isomerase C |
| Reads supporting (aligned to +/- strand): ref base . (1/1); new base G (81/187); total (83/188) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.16e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 301 total aligned reads displayed.
GACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑CTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AA‑G‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTC > NC_000913/3957033‑3957210 | taCAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑aa < 1:8483600/92‑1 (MQ=21)gACAGATATGAAACGTATTGCTTTTGCGGGTTAAGTGCGCGCTGATGCCCTCCCCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑aa < 1:8610907/93‑1 (MQ=21) aCAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AA‑g > 1:1612508/1‑93 (MQ=21) gATGTGAAACGTATTGCTGTTGCGGTTTAAGTGCGCGCGTATCCCCTCCCCCCGTCC‑‑CTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AA‑ggcc < 2:7245091/93‑4 (MQ=18) gATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AA‑ggcc < 1:28121/93‑4 (MQ=21) gATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AA‑ggcc < 2:453109/93‑4 (MQ=21) atatGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AA‑ggcct < 2:3378393/93‑5 (MQ=21) atGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTtc < 2:431021/93‑1 (MQ=18) atGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTtc < 2:2213877/93‑1 (MQ=18) tGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTtct < 2:6938024/93‑1 (MQ=18) aaaCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTcc < 2:6648728/93‑1 (MQ=18) aaCGTATTGCTGTTGCGGGTTAAGCGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCt < 1:5855060/93‑1 (MQ=18) aCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTg < 2:5072294/93‑1 (MQ=18) aCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTg < 1:1580200/93‑1 (MQ=18) tATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCCCACCCCC‑‑ACCCCCTCCCCCAAGGGGG‑GGGAGGAAACAATCC‑AA‑G‑CCTTCTCCTGgag > 2:6832818/1‑93 (MQ=16) aTTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGgaga < 1:2970114/93‑1 (MQ=18) ttGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGaa < 1:230901/93‑1 (MQ=18) ttGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGaa < 1:945397/93‑1 (MQ=18) gCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAgg < 2:1713423/93‑1 (MQ=18) gTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGC‑AC‑CTCTCCCACAGGGGGA‑GGGAGAAAACACT‑CAAA‑G‑CCTTCTCCTGGAGAAGGGCt > 1:6908493/1‑93 (MQ=18) gTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCt < 1:9612040/93‑1 (MQ=18) gTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCt < 2:3885648/93‑1 (MQ=18) ttGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCtt < 1:8416769/93‑1 (MQ=18) ttcGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTg < 1:4511446/91‑1 (MQ=18) tGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTg < 1:5937716/93‑1 (MQ=18) tGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTg < 2:2595174/93‑1 (MQ=18) cGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCt < 1:4669408/93‑1 (MQ=18) ggTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTAt < 2:407435/93‑1 (MQ=18) ggTTAAGTGCGCGCTGATGCCCCCCCCCCC‑‑ACCCCCCCCCCCCCGGAGAGGGGGGAAAAAAAC‑A‑AA‑A‑CCCTCTCCTTGAGAAAGCCTTGCTAt > 2:4859313/1‑93 (MQ=255) gTTAAGTGCGCGCTGATGCCCTCGCCCCGCCC‑‑CTCTCCCACAGGCAGA‑GGGAGAAAGCACT‑C‑AAGG‑TCTTCTCCAGGAGAAGGCCTTGCTAtt < 2:1119453/93‑1 (MQ=17) gTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTAtt < 2:9805315/93‑1 (MQ=18) gTTAAGTGCGCGCTGATGCCCTCACCACG‑‑ACCCTCTACCCCGGGGAGA‑GGGAGAACACACT‑C‑AAGG‑CCTTCTCCTGGAGAGGGCCTTGCTAtt < 2:8954127/93‑1 (MQ=18) tAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAg < 1:545640/93‑1 (MQ=18) aaGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGt < 2:8550083/93‑1 (MQ=18) aaGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGt < 1:8154696/93‑1 (MQ=18) cgcgcTGATGCCCTCCCCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCgg < 2:2025143/93‑1 (MQ=21) gcgcTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGt < 1:1024307/93‑1 (MQ=21) gcTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTAc < 1:6452811/93‑1 (MQ=21) gcTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTAc < 1:9099825/93‑1 (MQ=21) cTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACa < 2:1006398/93‑1 (MQ=21) cTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACa < 1:1512254/93‑1 (MQ=21) cTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACa < 1:3823532/93‑1 (MQ=21) gATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGc < 2:2859566/93‑1 (MQ=25) gATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGc < 2:3625155/93‑1 (MQ=25) tGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCAc < 1:4223593/93‑1 (MQ=25) cccTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCt < 1:701308/93‑1 (MQ=25) cccTCACCCCG‑‑ACCCTCCCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCt < 2:1913954/93‑1 (MQ=25) ccTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCtt < 1:4145219/93‑1 (MQ=25) tCACCCCG‑‑ACCCTCTCCTACAGGGGGA‑GGGAGAAAACAAT‑C‑AAGG‑CCTTCTCCTGGAGAAAGCCTTGCTATTAGTTGCGGTTCAGCGCCttca > 2:1313969/1‑91 (MQ=255) tCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTaa > 1:9302539/1‑93 (MQ=37) tCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTaa > 1:5241201/1‑93 (MQ=37) gaccctctCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGAtgtg < 1:7993473/89‑1 (MQ=38) gaccctctCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGAtgtg < 2:9132483/89‑1 (MQ=38) accctctCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGa < 2:8336278/90‑1 (MQ=255) ccctctCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGat > 1:5746983/3‑93 (MQ=255) cctctCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGata < 1:6211915/92‑1 (MQ=255) ctctCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGatat > 1:2580827/1‑93 (MQ=255) tctcCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATc < 1:3910405/93‑1 (MQ=255) tctcCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATc > 1:7270129/1‑93 (MQ=255) tcCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCg > 2:8115865/1‑93 (MQ=255) tcCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCg > 2:2786012/1‑93 (MQ=255) tcCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCg > 2:7923269/1‑93 (MQ=255) tcCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCg < 1:7832857/93‑1 (MQ=255) cccACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCGCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGa < 2:6496041/93‑1 (MQ=255) ccACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGac > 1:2879560/1‑92 (MQ=255) ccACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGaa > 2:6866438/1‑93 (MQ=255) ccACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGaa < 1:32497/93‑1 (MQ=255) ccACAGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGaa < 1:9723890/93‑1 (MQ=255) cacaGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAAc > 2:5556530/1‑93 (MQ=255) cacaGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAAc > 2:9607479/1‑93 (MQ=255) acaGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACt < 1:9192982/93‑1 (MQ=255) caGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTg > 1:9960060/1‑93 (MQ=255) caGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTg < 1:1976285/93‑1 (MQ=255) caGGGAGA‑GGGAGAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCCTGGTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTg > 2:473292/1‑93 (MQ=255) agggaga‑gggagAAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTgg > 2:946124/1‑93 (MQ=255) gggaga‑gggagaAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTggg < 1:7383276/93‑1 (MQ=255) gggaga‑gggagaAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTCGCCAGTAGTTGCGGGACAGCACCTGTATGTTGTGAGATCCGAACTggg > 2:7713568/1‑93 (MQ=255) gaga‑gggagaAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGgtg > 1:515729/1‑93 (MQ=255) aga‑gggagaAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGgtgt < 2:6525414/93‑1 (MQ=255) ga‑gggagaAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGtgtg > 1:1943469/1‑93 (MQ=255) ga‑gggagaAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGtgtg > 2:7345360/1‑93 (MQ=255) ga‑gggagaAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGtgtg > 1:2766461/1‑93 (MQ=255) gggagaAAACACT‑C‑AAGG‑CCTTCTCCTGGATAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCa < 2:5285359/93‑1 (MQ=255) gggagaAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCa > 2:3442585/1‑93 (MQ=255) gggagaAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCa < 2:3832326/93‑1 (MQ=255) gagaAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGc > 2:2891511/1‑93 (MQ=255) gagaAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGc < 1:3106802/93‑1 (MQ=255) agaAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCg > 2:805844/1‑93 (MQ=255) agaAAACACT‑C‑AAGG‑ACTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCg > 1:2246709/1‑93 (MQ=255) gaAAACACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCgg > 1:3650016/1‑93 (MQ=255) aaaaCACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCggg > 1:7926106/1‑93 (MQ=255) aaCACT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGcc > 2:9667051/1‑93 (MQ=255) acacT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCg < 2:501141/93‑1 (MQ=255) cacT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCTGGCCgg > 1:4733603/1‑93 (MQ=255) cacT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCgg > 2:6246329/1‑93 (MQ=255) acT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGt < 2:3108836/93‑1 (MQ=255) acT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGt < 1:1325764/93‑1 (MQ=255) cT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTc < 1:1391337/93‑1 (MQ=255) cT‑C‑AAGG‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTc > 2:6131500/1‑93 (MQ=255) cT‑C‑AA‑GTCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTc < 2:699131/93‑1 (MQ=255) | GACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑CTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AA‑G‑CCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTC > NC_000913/3957033‑3957210 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |