| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,957,560 | +C | intergenic (‑129/‑732) | ppiC ← / → rep | peptidyl‑prolyl cis‑trans isomerase C/rep helicase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,957,558 | 1 | . | C | 99.7% | 1269.5 / ‑5.6 | 386 | intergenic (‑127/‑734) | ppiC/rep | peptidyl‑prolyl cis‑trans isomerase C/rep helicase |
| Reads supporting (aligned to +/- strand): ref base . (1/0); major base C (188/196); minor base G (1/0); total (190/196) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.91e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 423 total aligned reads displayed.
TAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CC‑T‑GC‑TCGCA‑GGT‑C‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATG > NC_000913/3957470‑3957645 | aGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGT‑c‑cc < 1:3522547/93‑2 (MQ=255) gCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGT‑c‑cct < 2:4651424/93‑3 (MQ=255) gCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CC‑GGGCTTCGCA‑GGT‑c‑cct < 1:7895890/93‑3 (MQ=255) gCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGT‑c‑cct > 1:8714947/1‑91 (MQ=255) cATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGT‑c‑cctc < 1:4617034/93‑4 (MQ=255) aTGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGT‑c‑cctca > 2:3388512/1‑89 (MQ=255) gATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAg > 1:9662376/1‑93 (MQ=255) aTCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAgg < 2:10023356/93‑1 (MQ=255) aTCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAgg > 1:8183801/1‑93 (MQ=255) tCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGTCC‑GGGAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAggg > 1:2050685/1‑93 (MQ=255) tCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAggg > 2:7401021/1‑93 (MQ=255) ccGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑TCCC‑G‑GCTTCGCC‑GGTCC‑C‑TCAAgggg > 2:758161/1‑93 (MQ=255) ccGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAgggg < 2:5127500/93‑1 (MQ=255) cGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGga < 1:686728/93‑1 (MQ=255) cGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGACC‑GGAAAATT‑CG‑G‑GCTTCGCA‑GGTCC‑C‑TCAAGGGga > 2:3920551/1‑93 (MQ=255) gATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGGAAAAGCCC‑CGAAAA‑T‑CCGG‑GCTTCGCAGGGC‑C‑C‑TCAAGGGGGGaaa > 2:1940500/1‑93 (MQ=255) gATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGaaa > 2:4050144/1‑93 (MQ=255) gATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGaaa > 1:7651234/1‑93 (MQ=255) tGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCTCA‑GGTCC‑C‑TCAAGGGGAGAAAAc > 2:7259791/1‑93 (MQ=255) tGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAAc < 2:2569141/93‑1 (MQ=255) tGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGCAAAc > 1:3730247/1‑93 (MQ=255) gCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCCAGGGGAGAAAACt > 1:7822958/1‑93 (MQ=255) gCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACt > 1:5967259/1‑93 (MQ=255) cTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGGAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACtt > 1:3096040/1‑93 (MQ=255) cTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACtt < 1:693321/93‑1 (MQ=255) tAACGTAATTGTCAGTCGGGGAGTGGCGGGTACATATATAGCAAAAGCCA‑GGAAAA‑C‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTa < 1:1918711/93‑1 (MQ=255) tAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTa < 1:6626596/93‑1 (MQ=255) tAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTa < 1:6056807/93‑1 (MQ=255) tAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTa < 1:1108621/93‑1 (MQ=255) tAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTa > 1:10004361/1‑93 (MQ=255) tAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTa > 2:9078832/1‑93 (MQ=255) cGTAATTGTCAGTCAGGGAGTGGCTGGGACCTTTATGGCAAAAGCCC‑GGGAAA‑T‑CCGG‑GCTTCGCC‑GGG‑CTC‑TCAAGGGGAGCAAACCTCggg > 1:7285211/1‑93 (MQ=255) gTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGc > 1:5285254/1‑93 (MQ=255) aaTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCct < 2:2927154/93‑1 (MQ=255) aTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCctc < 1:4040385/93‑1 (MQ=255) aTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCctc > 2:6701435/1‑93 (MQ=255) ttGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCctct > 1:8818324/1‑93 (MQ=255) tGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTa < 1:9429408/93‑1 (MQ=255) tGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTa < 1:5501688/93‑1 (MQ=255) gtcagtcaGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTAt > 2:5358060/1‑93 (MQ=255) gtcagtcaGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTAt > 2:7870572/1‑93 (MQ=255) gtcagtcaGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTAt < 2:1473900/93‑1 (MQ=255) gtcagtcaGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTAt < 1:3964854/93‑1 (MQ=255) cagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATgg < 2:6958507/93‑1 (MQ=255) gtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGGAAAA‑C‑CG‑G‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGGAAACTTAGGGCCTCTATGGGc > 2:1262187/1‑93 (MQ=255) tcagGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCt > 1:2795195/1‑93 (MQ=255) tcagGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCt > 1:7426141/1‑93 (MQ=255) agGGAGTGGCTGGTACATATATTGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCCAAGGGAGAAAACTTAGGGCCTCTATGGGCTAc > 2:9589144/1‑93 (MQ=255) agGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc < 1:9195212/93‑1 (MQ=255) gggAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CC‑GGGCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACa > 1:7201277/1‑93 (MQ=255) aGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAg > 2:6343641/1‑93 (MQ=255) gTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGt > 2:9851498/1‑93 (MQ=255) tGGCTGGTACATATATGGCAAAAGCGC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAGGGGGAGAAACCTTAGGGCCTCTATGGGCTACAAAGTc < 1:8475989/93‑1 (MQ=255) tGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CC‑GGGCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTc > 1:8584216/1‑93 (MQ=255) ggCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCa < 1:6353632/93‑1 (MQ=255) ggCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCa < 1:5045612/93‑1 (MQ=255) ggCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CC‑GGGCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCa > 2:4872432/1‑93 (MQ=255) cTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAtt > 1:1408765/1‑93 (MQ=255) ggTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt > 2:6039658/1‑93 (MQ=255) ggTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt < 2:7739029/93‑1 (MQ=255) ggTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt > 1:2965123/1‑93 (MQ=255) gTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATc < 1:7494616/93‑1 (MQ=255) tACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCg > 1:9564880/1‑93 (MQ=255) tACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCg > 2:1718760/1‑93 (MQ=255) aCATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgg < 1:9814052/93‑1 (MQ=255) aCATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgg < 1:2141926/93‑1 (MQ=255) cATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCggg > 1:4792785/1‑93 (MQ=255) tatatGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCggggt > 2:8522725/1‑92 (MQ=255) atatGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGAt < 2:6280978/93‑1 (MQ=255) atGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATgg > 2:810853/1‑93 (MQ=255) atGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATgg > 2:1207331/1‑93 (MQ=255) tGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGt < 2:8432336/93‑1 (MQ=255) gCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGtta < 2:4357849/93‑1 (MQ=255) cAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttat > 2:5567846/1‑93 (MQ=255) aaaaGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatt > 2:367124/1‑93 (MQ=255) aaaGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattt > 2:8001115/1‑93 (MQ=255) aaaGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattt > 2:5855670/1‑93 (MQ=255) aaaGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGT‑C‑CATCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattt > 2:4995059/1‑93 (MQ=255) aaGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatttt > 2:2952948/1‑93 (MQ=255) gCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttat < 2:6148915/93‑1 (MQ=255) ccc‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttatt < 2:4268401/93‑1 (MQ=255) cc‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg < 2:5775253/93‑1 (MQ=255) cc‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg < 1:3258836/93‑1 (MQ=255) cc‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg > 1:7140836/1‑93 (MQ=255) ggcttCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAg < 1:4814537/89‑1 (MQ=255) ggcttCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAg > 2:4389236/5‑93 (MQ=255) cttCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCg > 1:170937/3‑93 (MQ=255) ttCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGa < 1:4928346/92‑1 (MQ=255) ttCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGa < 1:2556450/92‑1 (MQ=255) tCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGat < 2:9319051/93‑1 (MQ=255) tCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGat > 1:1012311/1‑93 (MQ=255) cGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGTGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGata < 1:1618346/93‑1 (MQ=255) cGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGata < 1:5567847/93‑1 (MQ=255) cGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGata < 1:265884/93‑1 (MQ=255) cGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGata < 2:9892381/93‑1 (MQ=255) gCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGatat > 2:6465832/1‑93 (MQ=255) gCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGatat > 2:2478643/1‑93 (MQ=255) gCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGatat < 2:8899620/93‑1 (MQ=255) gCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGatat < 1:3348081/93‑1 (MQ=255) cA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATg < 1:4473386/93‑1 (MQ=255) | TAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CC‑T‑GC‑TCGCA‑GGT‑C‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATG > NC_000913/3957470‑3957645 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |