BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,001,717	+C	coding (86/903 nt)	rarD ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,001,717	1	.	C	100.0%	1217.4 / NA	387	T29R (ACG→AGG)	rarD	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (0/0); new base C (188/199); total (188/199)

Only 100 of 446 total aligned reads displayed.

TGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑G‑TGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAAT  >  NC_000913/4001625‑4001809

tGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑g                                                                                               <  1:1561059/93‑1 (MQ=255)

 gCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑gc                                                                                              <  2:9002031/93‑2 (MQ=255)

 gCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑gc                                                                                              >  1:5323135/1‑92 (MQ=255)

 gCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑gc                                                                                              <  2:6551169/93‑2 (MQ=255)

 gCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAATA‑C‑gc                                                                                              >  1:8309601/1‑92 (MQ=255)

  cTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑gct                                                                                             <  1:9730714/93‑3 (MQ=255)

   tcatcaGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑gctg                                                                                            <  1:9509232/93‑4 (MQ=255)

      tcaGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGgcg                                                                                         >  2:5888111/1‑93 (MQ=255)

       caGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGgcgc                                                                                        <  2:5295275/93‑1 (MQ=255)

        aGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCt                                                                                       >  2:8722881/1‑93 (MQ=255)

         gCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCta                                                                                      <  1:8068102/93‑1 (MQ=255)

          caccacCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCtat                                                                                     >  1:9219809/1‑93 (MQ=255)

          caccacCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAAATTGAAGTA‑C‑GCTGGCGCtat                                                                                     >  2:1890105/1‑93 (MQ=255)

           accaccATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCtata                                                                                    <  2:5675382/93‑1 (MQ=255)

           accaccATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCtata                                                                                    >  2:7922249/1‑93 (MQ=255)

           accaccATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCtata                                                                                    >  2:4181691/1‑93 (MQ=255)

           accaccATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCtata                                                                                    <  1:1669352/93‑1 (MQ=255)

           accaccATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCtata                                                                                    >  1:6098288/1‑93 (MQ=255)

           accaccATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGCAATAAATCAAATTGAAAGA‑C‑GATGGCGCtata                                                                                    >  1:10004813/1‑93 (MQ=255)

            ccaccaTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATAc                                                                                   <  1:6021078/93‑1 (MQ=255)

            ccaccaTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGGA‑C‑GCTGGCGCTATAc                                                                                   >  2:8198527/1‑93 (MQ=255)

            ccaccaTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTCGAAGTA‑C‑GCTGGCGCTATAc                                                                                   <  2:7017374/93‑1 (MQ=255)

            ccaccaGAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATAc                                                                                   <  1:1215288/93‑1 (MQ=255)

             caccaTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCtataac                                                                                  >  2:3974453/1‑91 (MQ=255)

               ccaTAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATAcccc                                                                                <  2:981177/93‑1 (MQ=255)

                 aTAAAGAAAAACGACCAGATCACCCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTTAAGTA‑C‑GCTGGCGCTATACCCCaa                                                                              <  2:7220375/93‑1 (MQ=255)

                   aaaGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCaaaa                                                                            >  1:424022/1‑92 (MQ=255)

                       aaaaaCGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCacataaaa                                                                        >  2:4464733/1‑93 (MQ=255)

                         aaaCGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCaaataaaata                                                                      >  1:8775750/1‑93 (MQ=255)

                          aaCGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAaataaaataa                                                                     <  1:4359015/93‑1 (MQ=255)

                            cGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGCGCACGTAGTAAATCAACTTGAAGTA‑C‑GCGGGCGCTATACCCCAAATAAAATAAGc                                                                   <  1:5737955/93‑1 (MQ=255)

                             gACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCAGGTAGGAAATCAACTTGAATTA‑CAC‑TGGCTCTATACACCAaataaaataaaag                                                                  >  1:2009258/1‑90 (MQ=255)

                             gACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCg                                                                  >  1:290855/1‑93 (MQ=255)

                              aCCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCgg                                                                 >  1:5894275/1‑93 (MQ=255)

                               ccAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTTGCGCTATACCCCAAATAAAATAAGCGGc                                                                >  2:4593638/1‑93 (MQ=255)

                               ccAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGc                                                                <  2:8289713/93‑1 (MQ=255)

                                cAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCa                                                               >  2:4885251/1‑93 (MQ=255)

                                 aGATCACGCGATGCGTCAGGATTTCATCGGCGTGCATGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATCCCCCAAATAAAATAAGCGGCaa                                                              <  1:5238681/93‑1 (MQ=255)

                                 aGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGGGCTATACCCCAAATAAAATAAGCGGCaa                                                              >  1:9977484/1‑93 (MQ=255)

                                 aGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCaa                                                              <  1:3206510/93‑1 (MQ=255)

                                 aGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCaa                                                              >  1:2151765/1‑93 (MQ=255)

                                 aGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCaa                                                              >  2:1092281/1‑93 (MQ=255)

                                  gATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCaaa                                                             >  1:145224/1‑92 (MQ=255)

                                  gATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAAATTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAag                                                             >  2:2548234/1‑93 (MQ=255)

                                   aTCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAaga                                                            <  2:9385827/93‑1 (MQ=255)

                                   aTCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAaga                                                            <  2:243603/93‑1 (MQ=255)

                                   aTCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAaga                                                            >  2:8066183/1‑93 (MQ=255)

                                      aCGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCg                                                         <  1:1932531/93‑1 (MQ=255)

                                        gcgATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAg                                                       <  2:3271008/93‑1 (MQ=255)

                                        gcgATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAg                                                       >  1:890952/1‑93 (MQ=255)

                                        gcgATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAAT‑AACTTTAAGGACC‑G‑TTGGGCTATAACCCAAATAAAAAAAACCGCGAGAACGAgg                                                      >  2:6131923/1‑92 (MQ=255)

                                         cgATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGt                                                      <  1:723307/93‑1 (MQ=255)

                                         cgATGCGTCAGGATTTAATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAga                                                      >  2:2184366/1‑92 (MQ=255)

                                           aTGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTaa                                                    >  2:22660/1‑93 (MQ=255)

                                           aTGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTaa                                                    >  1:5053143/1‑93 (MQ=255)

                                           aTGCGTCAGGATTTCATCGGCGGGCACGGAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTaa                                                    <  1:556028/93‑1 (MQ=255)

                                            tGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAAt                                                   <  1:7702115/93‑1 (MQ=255)

                                             gCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATa                                                  <  2:1213056/93‑1 (MQ=255)

                                             gCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATa                                                  <  2:6257125/93‑1 (MQ=255)

                                              cGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATAc                                                 <  1:6421224/93‑1 (MQ=255)

                                                tCAGGATTTCATCGGCGGGCTCGCAGTAAATCAACTTGAAGTA‑C‑GCCTGCGCTATACCCCTAAAAAAATAAGCTGCTAGAGCGAGGAATACGc                                               >  2:9264854/1‑93 (MQ=255)

                                                tCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGc                                               <  2:15796/93‑1 (MQ=255)

                                                tCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGc                                               >  2:7079535/1‑93 (MQ=255)

                                                tCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGc                                               <  2:3737298/93‑1 (MQ=255)

                                                  aGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑A‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGccc                                             >  1:4007498/1‑93 (MQ=255)

                                                   ggATTTCATCGGCGGGCCCGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGGAAGAGCGAGGAATAGGccgt                                            >  2:1777783/1‑91 (MQ=255)

                                                   ggATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCt                                            >  2:4349375/1‑93 (MQ=255)

                                                   ggATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCt                                            >  1:4669314/1‑93 (MQ=255)

                                                    gATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTg                                           >  2:884113/1‑93 (MQ=255)

                                                     aTTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGc                                          <  2:9089001/93‑1 (MQ=255)

                                                     aTTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGc                                          >  2:291922/1‑93 (MQ=255)

                                                     aTTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGc                                          >  2:1373953/1‑93 (MQ=255)

                                                       ttCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCcg                                        >  2:7936720/1‑93 (MQ=255)

                                                        tCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCcgc                                       <  2:96548/93‑1 (MQ=255)

                                                           tCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCgtt                                    <  1:6854728/93‑1 (MQ=255)

                                                           tCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCgtt                                    >  1:2602917/1‑93 (MQ=255)

                                                            cggcggGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCgttt                                   <  1:9655462/93‑1 (MQ=255)

                                                             ggcggGCACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCgtttg                                  <  2:7623181/93‑1 (MQ=255)

                                                                   cACGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATAAGCCCTGCCGCGTTTGTTTTGc                            <  1:1849370/93‑1 (MQ=255)

                                                                    aCGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGca                           <  1:9152872/93‑1 (MQ=255)

                                                                    aCGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGca                           <  1:7132533/93‑1 (MQ=255)

                                                                     cGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcat                          >  2:6342110/1‑93 (MQ=255)

                                                                     cGTAGTAAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcat                          <  1:2364653/93‑1 (MQ=255)

                                                                      gtagtaAATCAACTTGAAGTA‑C‑GCTGGCGCTATCCCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcatc                         <  2:6289524/93‑1 (MQ=255)

                                                                      gtagtaAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcatc                         <  1:6278341/93‑1 (MQ=255)

                                                                      gtagtaAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcatc                         <  1:54347/93‑1 (MQ=255)

                                                                          taAATCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGcatccatc                     >  1:7349227/1‑93 (MQ=255)

                                                                              tCAAGTTGAAGTA‑CTC‑TGGCGCTATACCGCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGa                 <  1:5724745/93‑1 (MQ=255)

                                                                              tCAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGa                 <  1:6671170/93‑1 (MQ=255)

                                                                               cAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGaa                <  1:3522289/93‑1 (MQ=255)

                                                                               cAACTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGaa                <  2:7403956/93‑1 (MQ=255)

                                                                                aaCTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAAt               >  1:8518309/1‑93 (MQ=255)

                                                                                 aCTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATa              >  2:8089816/1‑93 (MQ=255)

                                                                                 aCTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATa              >  2:8383167/1‑93 (MQ=255)

                                                                                 aCTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATa              <  2:3480055/93‑1 (MQ=255)

                                                                                 aCTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAACAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATa              <  2:2895390/93‑1 (MQ=255)

                                                                                  cTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATAc             <  2:4064470/93‑1 (MQ=255)

                                                                                  cTTGAAGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATAc             >  1:9424774/1‑93 (MQ=255)

                                                                                      aaGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCAt         >  1:3650492/1‑93 (MQ=255)

                                                                                       aGTA‑C‑GCTGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCAtt        <  2:5491839/93‑1 (MQ=255)

TGCTCATCAGCACCACCATAAAGAAAAACGACCAGATCACGCGATGCGTCAGGATTTCATCGGCGGGCACGTAGTAAATCAACTTGAAGTA‑C‑G‑TGGCGCTATACCCCAAATAAAATAAGCGGCAAGAGCGAGTAATACGCCCTGCCGCGTTTGTTTTGCATCCATCGGGAATACTCATTTTTAAT  >  NC_000913/4001625‑4001809

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`