BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,005,601	+C	coding (237/282 nt)	b4568 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,005,600	1	.	C	98.6%	1153.0 / 5.1	356	coding (236/282 nt)	b4568	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (4/1); new base C (194/157); total (198/158)
Fisher's exact test for biased strand distribution p-value = 3.87e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 404 total aligned reads displayed.

CGTAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GG‑CTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTG  >  NC_000913/4005508‑4005687

cgTAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑gg                                                                                          >  1:5402156/1‑93 (MQ=255)

cgTAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑gg                                                                                          <  1:8457755/93‑1 (MQ=255)

  tAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GG‑cc                                                                                       <  2:8341556/93‑2 (MQ=255)

  tAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GG‑cc                                                                                       <  1:5316905/93‑2 (MQ=255)

  tAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GG‑cc                                                                                       <  1:6287531/93‑2 (MQ=255)

   aaTGGTTTGGGCTGGGATTGGGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GG‑cct                                                                                      <  2:1259696/93‑3 (MQ=255)

   aaTGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GG‑cct                                                                                      >  1:8706774/1‑91 (MQ=255)

    aTGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GG‑cctg                                                                                     >  1:4714649/1‑90 (MQ=255)

     tGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GG‑cctgt                                                                                    >  1:2258045/1‑89 (MQ=255)

     tGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GG‑cctgt                                                                                    <  2:1195939/93‑5 (MQ=255)

     tGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GG‑cctgt                                                                                    >  1:7820543/1‑89 (MQ=255)

     tGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GG‑cctgt                                                                                    >  2:3577901/1‑89 (MQ=255)

     tGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GG‑cctgt                                                                                    >  1:4761872/1‑89 (MQ=255)

     tGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GG‑cctgt                                                                                    <  2:5247102/93‑5 (MQ=255)

     tGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GG‑cctgt                                                                                    >  1:4604174/1‑89 (MQ=255)

       gTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTAt                                                                                   >  2:6647824/1‑93 (MQ=255)

        tttGGGCTGGGATTGCGCTTCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGTGT‑ATTGTGTGT‑GG‑T‑GGCCTGTAtc                                                                                  >  1:8933249/1‑93 (MQ=255)

        tttGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTAtc                                                                                  >  2:1100461/1‑93 (MQ=255)

        tctGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTAtc                                                                                  <  1:9451578/91‑1 (MQ=255)

         ttGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTAtct                                                                                 <  1:1479017/93‑1 (MQ=255)

          tGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTAtctc                                                                                <  2:4374255/93‑1 (MQ=255)

              cTGGGATTGCGCTGCTTGGCCTGCATGTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTctgct                                                                            <  2:6542522/93‑1 (MQ=255)

              cTGGGATTGCGCTGCTCGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTctgct                                                                            <  2:946253/93‑1 (MQ=255)

               tGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGTTT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTctgctg                                                                           >  1:7679842/1‑93 (MQ=255)

                 ggATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGa                                                                         <  2:8485399/93‑1 (MQ=255)

                  gATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGAt                                                                        <  2:2192074/93‑1 (MQ=255)

                    ttGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GGTT‑GC‑CTGTATCTCTGCTGGATgg                                                                      >  1:10000472/1‑93 (MQ=255)

                    ttGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATgg                                                                      >  1:3715376/1‑93 (MQ=255)

                      gcgcTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGt                                                                    >  2:4718344/1‑93 (MQ=255)

                      gcgcTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGt                                                                    <  2:6462178/93‑1 (MQ=255)

                        gctgctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTa                                                                  >  2:3986473/1‑93 (MQ=255)

                         ctgctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTAc                                                                 <  1:8578436/93‑1 (MQ=255)

                          tgctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTAcc                                                                >  1:5690937/1‑93 (MQ=255)

                          tgctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTACATACGCTGATT‑ATGGTGGGC‑GG‑TGGG‑CTGTATCTCTGCTGGATGGGTTAcc                                                                >  2:3774513/1‑93 (MQ=255)

                           gctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCa                                                               >  2:4887101/1‑93 (MQ=255)

                           gctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCa                                                               >  2:277239/1‑93 (MQ=255)

                            ctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAg                                                              >  1:3929881/1‑93 (MQ=255)

                            ctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAg                                                              <  1:7554331/93‑1 (MQ=255)

                            ctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAg                                                              >  2:8717084/1‑93 (MQ=255)

                            ctTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGCC‑GG‑T‑GGCCTGTATCTCTGCTGGGTGGGGTACCAg                                                              >  2:1690244/1‑93 (MQ=255)

                             ttGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGa                                                             <  1:201903/93‑1 (MQ=255)

                             ttGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGa                                                             <  1:1140008/93‑1 (MQ=255)

                             ttGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGa                                                             <  1:4950000/93‑1 (MQ=255)

                             ttGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGa                                                             >  1:3026701/1‑93 (MQ=255)

                               ggCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATg                                                           >  2:7907341/1‑93 (MQ=255)

                               ggCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATg                                                           >  1:1225058/1‑93 (MQ=255)

                                 ccTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCt                                                         <  1:7910053/93‑1 (MQ=255)

                                 ccTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCt                                                         >  1:481897/1‑93 (MQ=255)

                                  cTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTa                                                        >  2:6819525/1‑93 (MQ=255)

                                    gCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACg                                                      >  2:7525654/1‑93 (MQ=255)

                                    gCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACg                                                      <  2:9838489/93‑1 (MQ=255)

                                      tttttATTATCGAAAAATTGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACTAGATGCTACgtg                                                    >  2:8961608/2‑93 (MQ=255)

                                      aTTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgtg                                                    >  1:4184584/1‑93 (MQ=255)

                                       tttGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgtgg                                                   <  2:882966/93‑1 (MQ=255)

                                         tGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACgtggtg                                                 >  1:9223166/1‑93 (MQ=255)

                                          gATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGc                                                <  2:2610251/93‑1 (MQ=255)

                                          gATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGc                                                >  2:2464658/1‑93 (MQ=255)

                                           aTTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCa                                               >  1:8110204/1‑93 (MQ=255)

                                             tATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACt                                             >  2:6504315/1‑93 (MQ=255)

                                             tATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACt                                             <  1:3398037/93‑1 (MQ=255)

                                                     aaaTGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAag                                     >  2:7212833/1‑93 (MQ=255)

                                                      aaTGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAaga                                    >  1:4311602/1‑93 (MQ=255)

                                                      aaTGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAaga                                    <  2:6046134/93‑1 (MQ=255)

                                                       aTGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAagag                                   >  1:1859941/1‑93 (MQ=255)

                                                        tGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAgg                                  >  2:2304161/1‑93 (MQ=255)

                                                        tGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAgg                                  >  1:283225/1‑93 (MQ=255)

                                                         ggCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGc                                 <  2:3276978/93‑1 (MQ=255)

                                                         ggCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGc                                 <  2:2006347/93‑1 (MQ=255)

                                                         ggCCTGGCGGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGc                                 <  2:9643366/93‑1 (MQ=255)

                                                           ccTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCgg                               >  2:5175121/1‑93 (MQ=255)

                                                            cTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGt                              >  2:5437667/1‑93 (MQ=255)

                                                             tGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGtt                             >  1:3287608/1‑93 (MQ=255)

                                                             tGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGtt                             >  1:9654413/1‑93 (MQ=255)

                                                              tgCTTCATACGGTGATTAATGGTGGCC‑GT‑T‑GC‑CTTGTTCTTTTGTTGAATGGTTTCCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGttt                            <  2:4591133/92‑1 (MQ=255)

                                                              ggCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGttt                            <  1:5558957/93‑1 (MQ=255)

                                                               gCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTc                           <  2:622774/93‑1 (MQ=255)

                                                               gCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTc                           <  2:1441338/93‑1 (MQ=255)

                                                                  gCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGc                        >  1:6838493/1‑93 (MQ=255)

                                                                  gCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGGTTCTGc                        >  1:6736122/1‑93 (MQ=255)

                                                                    aTACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCAc                      >  1:6112677/1‑93 (MQ=255)

                                                                     tACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCAcc                     >  1:7235615/1‑93 (MQ=255)

                                                                     tACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCAcc                     >  2:9270655/1‑93 (MQ=255)

                                                                     tACGCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCAcc                     >  1:5899984/1‑93 (MQ=255)

                                                                        gCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTgc                  <  1:2371814/93‑1 (MQ=255)

                                                                        gCTGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTgc                  <  1:1740161/93‑1 (MQ=255)

                                                                          tGATT‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTgcgc                >  1:4516082/1‑93 (MQ=255)

                                                                             tt‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCcac             >  2:350985/1‑93 (MQ=255)

                                                                              t‑ATGGTGGGCGGG‑T‑GC‑CTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGTCGGTTTCTGCACCTGCGCcaca            <  2:2890877/93‑1 (MQ=255)

                                                                              t‑ATGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCcaca            >  1:6499822/1‑93 (MQ=255)

                                                                                aTGGTGGGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAg           >  2:8086615/1‑93 (MQ=255)

                                                                                 tggtggGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAgg          >  1:7027295/1‑93 (MQ=255)

                                                                                   gtggGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTc        >  2:3016868/1‑93 (MQ=255)

                                                                                   gtggGC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTc        <  2:2656211/93‑1 (MQ=255)

                                                                                     gggC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGa      >  2:5743531/1‑93 (MQ=255)

                                                                                      ggC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAg     >  2:3874466/1‑93 (MQ=255)

                                                                                      ggC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAg     >  1:9338847/1‑93 (MQ=255)

                                                                                      ggC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAg     <  1:985884/93‑1 (MQ=255)

                                                                                       gC‑GG‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGc    <  1:8842207/93‑1 (MQ=255)

                                                                                          gg‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTg  <  1:6603017/93‑1 (MQ=255)

                                                                                          gg‑T‑GGCCTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTg  >  1:8249656/1‑93 (MQ=255)

CGTAATGGTTTGGGCTGGGATTGCGCTGCTTGGCCTGCATTTGATTATCGAAAAAATGGCCTGGCTGCATACGCTGATT‑ATGGTGGGC‑GG‑T‑GG‑CTGTATCTCTGCTGGATGGGTTACCAGATGCTACGTGGTGCACTGAAAAAAGAGGCGGTTTCTGCACCTGCGCCACAGGTCGAGCTG  >  NC_000913/4005508‑4005687

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`