BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,008,375	+A	coding (458/516 nt)	b4555 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,008,372	1	.	A	98.1%	570.8 / 1.6	158	coding (455/516 nt)	b4555	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (2/1); new base A (49/105); total (51/107)
Fisher's exact test for biased strand distribution p-value = 2.47e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 201 total aligned reads displayed.

GCTGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑C‑AAAGGCCATGCGCTGGAAG‑GCTGGCG‑‑‑‑AA‑‑‑‑CT‑GGCTACAG‑CTGAAGGATTG‑ATTGCGTT‑‑GTGACGGGATGAACGACGCC  >  NC_000913/4008280‑4008449

gCTGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑GTT‑c                                                                                              >  2:5943215/1‑93 (MQ=255)

  tGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAAGGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑C‑aa                                                                                           <  1:6307172/93‑1 (MQ=255)

  tGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑C‑aa                                                                                           <  1:607375/93‑1 (MQ=255)

  tGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑C‑aa                                                                                           <  2:7740648/93‑1 (MQ=255)

   ggAGCAGGCGTTTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTCCCTTAACCTGTCTGGGGGTGATGGCGGGCGGCG‑TTT‑C‑aaa                                                                                          <  2:8945073/93‑1 (MQ=255)

   ggAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑C‑aaa                                                                                          <  2:4930466/93‑1 (MQ=255)

    gAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑C‑aaaa                                                                                         <  1:9826993/93‑2 (MQ=255)

    gAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑C‑aaaa                                                                                         <  1:9678155/93‑2 (MQ=255)

    gAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑C‑aaaa                                                                                         <  2:6833418/93‑2 (MQ=255)

    gAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑C‑aaaa                                                                                         <  2:8059425/93‑2 (MQ=255)

    gAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑C‑aaaa                                                                                         <  1:1237007/93‑2 (MQ=255)

     aGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑C‑aaaag                                                                                        <  2:677629/93‑3 (MQ=255)

     aGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑C‑aaaag                                                                                        <  1:4282229/93‑3 (MQ=255)

      gCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑T‑aaaagg                                                                                       >  1:2270325/1‑90 (MQ=255)

         ggCGATTAACGCTCGTTGTGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCa                                                                                     <  1:8785594/93‑1 (MQ=255)

         ggCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCa                                                                                     <  2:4090441/93‑1 (MQ=255)

         ggCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCa                                                                                     <  2:183463/93‑1 (MQ=255)

         ggCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCa                                                                                     <  2:6182202/93‑1 (MQ=255)

         ggCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCa                                                                                     <  2:8919856/93‑1 (MQ=255)

         ggCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCa                                                                                     <  1:8437857/93‑1 (MQ=255)

          gCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGTGGCG‑TTT‑CGAAACGCCAt                                                                                    >  1:8647458/1‑93 (MQ=255)

          gCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTTCC‑AAAAGCCAt                                                                                    >  1:7266781/1‑93 (MQ=255)

          gCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCAt                                                                                    <  2:5294134/93‑1 (MQ=255)

          gCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCAt                                                                                    <  1:2491276/93‑1 (MQ=255)

          gCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCAt                                                                                    >  2:9852274/1‑93 (MQ=255)

           cGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCATg                                                                                   <  2:2170840/93‑1 (MQ=255)

            gATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGGG‑TTT‑CAAAAGGCCACgc                                                                                  >  1:3202988/1‑93 (MQ=255)

            gATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCATgc                                                                                  >  2:1240487/1‑93 (MQ=255)

            gATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑GTT‑CAAAAGGCCATgc                                                                                  >  2:1418269/1‑93 (MQ=255)

             aTTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGACATgcg                                                                                 >  1:2140043/1‑93 (MQ=255)

              ttAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCATgcgc                                                                                <  2:7068623/93‑1 (MQ=255)

              ttAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTCTCTCTACCTTACCCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCATgcgc                                                                                <  1:5995156/93‑1 (MQ=255)

               tAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCATGCGCt                                                                               >  1:9560887/1‑93 (MQ=255)

               tAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCATGCGCt                                                                               <  1:9168250/93‑1 (MQ=255)

               tAACCCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTGCCTTAGCCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCATGCGCt                                                                               <  2:5214774/93‑1 (MQ=255)

                aaCGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCATGCGCTg                                                                              >  2:2314600/1‑93 (MQ=255)

                aaCGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCATGCGCTg                                                                              <  2:9660288/93‑1 (MQ=255)

                 aCGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCATGCGCTgg                                                                             <  2:7609607/93‑1 (MQ=255)

                  cGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTTT‑A‑AAAAGCCATGGGCTGGa                                                                            >  1:3897479/1‑93 (MQ=255)

                  cGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCATGCGCTGGa                                                                            <  2:4425046/93‑1 (MQ=255)

                  cGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCATGCGCTGGa                                                                            <  1:8726461/93‑1 (MQ=255)

                   gCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCATGCGCTggga                                                                           >  2:741301/1‑91 (MQ=255)

                   gCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCATGCGCTGGaa                                                                           >  2:10034834/1‑93 (MQ=255)

                   gCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCATGCGCTGGaa                                                                           <  1:6357130/93‑1 (MQ=255)

                   gCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑GTT‑CAAAAGGCCATGCGCttgga                                                                           >  1:4683521/1‑89 (MQ=255)

                    cTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCATGCGCTGGAAg                                                                          >  1:4507462/1‑93 (MQ=255)

                    cTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCATGCGCTGGAAg                                                                          <  2:2482841/93‑1 (MQ=255)

                    cTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCATGCGCTGGAAg                                                                          <  1:1318727/93‑1 (MQ=255)

                    cTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCATGCGCTGGAAg                                                                          <  1:6670447/93‑1 (MQ=255)

                    cTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCATGCGCTGGAAg                                                                          <  1:7056936/93‑1 (MQ=255)

                    cTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCCCCCTTAACCTGTCTGGAAGTTATGGCGGGCGGCG‑TTT‑CAAAAGGCCATGCGCTTGAAg                                                                          <  1:1199456/93‑1 (MQ=255)

                     tCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGGG‑GTT‑CAAAAAGGCATGCGCTGGAAg‑g                                                                        >  1:5581611/1‑93 (MQ=255)

                     tCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCATGCGCTGGAAgc                                                                         <  1:5453039/93‑2 (MQ=255)

                      cGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCATGCGCTGGAAgcg                                                                        >  1:6826772/1‑91 (MQ=255)

                       gTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCATGCGCTGGAAgcgg                                                                       <  1:1946549/93‑4 (MQ=255)

                       gTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCATGCGCTGGAAgcgg                                                                       >  1:7448318/1‑90 (MQ=255)

                       gTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCATGCGCTGGAAgcgg                                                                       <  1:944310/93‑4 (MQ=255)

                       gTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCATGCGCTGGAAgcgg                                                                       <  1:5802827/93‑4 (MQ=255)

                       gTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑GTT‑CAAAAAGCCATGCGCTGGAAgcgg                                                                       >  2:4173649/1‑90 (MQ=255)

                        ttGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGGG‑TTTCC‑AAAGGACATGCGCTGGAAgcgtg                                                                      >  1:1114875/1‑89 (MQ=255)

                        ttGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCATGCGCTGGAAgcggt                                                                      <  1:4344178/93‑5 (MQ=255)

                        ttGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑GTT‑CAAAAGGCCATGCGCTGGAAgcggg                                                                      >  2:7298651/1‑89 (MQ=255)

                             gCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCG‑‑‑‑a                                                             <  1:712134/93‑1 (MQ=255)

                             gCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAAGCCATGCGCTGGAAGCGGTGGCG‑‑‑‑a                                                             >  1:7950130/1‑93 (MQ=255)

                              cGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCATGTGCTGGAAGCGGTGGCG‑‑‑‑aa                                                            <  2:6364701/93‑1 (MQ=255)

                              cGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCG‑‑‑‑aa                                                            <  1:2607125/93‑1 (MQ=255)

                                                                  tCTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGCGtt                        <  1:7177307/93‑1 (MQ=255)

                                                                   cTGGAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGCGttt                       >  2:3112731/1‑92 (MQ=255)

                                                                     ggAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGCGtttgg                     <  1:5231951/93‑4 (MQ=255)

                                                                     ggAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGCGtttgg                     <  2:2132598/93‑4 (MQ=255)

                                                                     ggAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGCGtttgg                     <  2:3772049/93‑4 (MQ=255)

                                                                     ggAAGTGATGGCGGGCGGCG‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGCGtttgg                     <  2:5825414/93‑4 (MQ=255)

                                                                            aTGGCGGGCGGCG‑TTT‑CGAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACggg              <  1:8977973/93‑1 (MQ=255)

                                                                            aTGGCGGGCGGCG‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACggg              >  2:3448880/1‑93 (MQ=255)

                                                                            aTGGCGGGCGGCG‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACggg              >  1:750883/1‑93 (MQ=255)

                                                                             tGGCGGGCGGCG‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGa             <  2:2881758/93‑1 (MQ=255)

                                                                             tGGCGGGCGGCG‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGa             <  2:8409837/93‑1 (MQ=255)

                                                                             tGGCGGGCGGCG‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGa             <  1:1803182/93‑1 (MQ=255)

                                                                              ggcgggcgGCG‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGAt            >  1:3153169/1‑93 (MQ=255)

                                                                              ggcgggcgGCG‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGAt            <  2:4646743/93‑1 (MQ=255)

                                                                               gcgggcggCG‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATg           <  2:3031378/93‑1 (MQ=255)

                                                                               gcgggcggCG‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATg           <  2:6051594/93‑1 (MQ=255)

                                                                               gcgggcggCG‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATg           <  2:8626408/93‑1 (MQ=255)

                                                                                  ggcggcG‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAac        <  1:10002085/93‑1 (MQ=255)

                                                                                  ggcggcG‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAac        <  2:4349308/93‑1 (MQ=255)

                                                                                  ggcggcG‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAac        >  1:8626918/1‑93 (MQ=255)

                                                                                   gcggcg‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacg       >  1:2925418/1‑93 (MQ=255)

                                                                                    cggcg‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacga      <  2:175524/93‑1 (MQ=255)

                                                                                    cggcg‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacga      <  2:641982/93‑1 (MQ=255)

                                                                                    cggcg‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacga      >  1:4095124/1‑93 (MQ=255)

                                                                                     ggcg‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacgac     >  1:2739865/1‑93 (MQ=255)

                                                                                     ggcg‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacgac     <  2:8753943/93‑1 (MQ=255)

                                                                                     ggcg‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGGGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacgac     >  1:2868802/1‑93 (MQ=255)

                                                                                      gcg‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacgacg    >  1:6196121/1‑93 (MQ=255)

                                                                                      gcg‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAacgacg    >  2:5876638/1‑93 (MQ=255)

                                                                                       cg‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGc   <  1:648139/93‑1 (MQ=255)

                                                                                        g‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGcc  >  1:2422851/1‑93 (MQ=255)

                                                                                        g‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGcc  <  1:6408410/93‑1 (MQ=255)

                                                                                        g‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGcc  >  1:8630491/1‑93 (MQ=255)

                                                                                        g‑TTT‑CAAAAGGCCATGCGCTGGAAGCGGTGGCG‑‑‑‑AAGAATCTGGGCTACAGCCTGAAGGATTGTATTGCGTTGGGTGACGGGATGAACGACGcc  <  2:9151104/93‑1 (MQ=255)

GCTGGAGCAGGCGATTAACGCTCGTTGGGGCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCG‑TTT‑C‑AAAGGCCATGCGCTGGAAG‑GCTGGCG‑‑‑‑AA‑‑‑‑CT‑GGCTACAG‑CTGAAGGATTG‑ATTGCGTT‑‑GTGACGGGATGAACGACGCC  >  NC_000913/4008280‑4008449

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`