| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,008,400 | +GAAA | coding (483/516 nt) | b4555 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,008,398 | 1 | . | A | 98.3% | 425.8 / ‑0.6 | 118 | coding (481/516 nt) | b4555 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (0/2); new base A (50/66); total (50/68) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.07e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.10e-01 | |||||||||||
| * | NC_000913 | 4,008,398 | 2 | . | A | 98.3% | 427.6 / ‑0.6 | 118 | coding (481/516 nt) | b4555 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (0/2); new base A (50/66); total (50/68) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.07e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.36e-01 | |||||||||||
| * | NC_000913 | 4,008,398 | 3 | . | G | 98.3% | 371.7 / ‑0.9 | 118 | coding (481/516 nt) | b4555 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (0/2); new base G (50/66); total (50/68) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.07e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.90e-01 | |||||||||||
| * | NC_000913 | 4,008,398 | 4 | . | A | 98.3% | 423.3 / ‑0.6 | 118 | coding (481/516 nt) | b4555 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (0/2); new base A (50/66); total (50/68) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.07e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.52e-01 | |||||||||||
Only 100 of 132 total aligned reads displayed.
GCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTTC‑AAAGGCCATGCGCTGGAAG‑GCTGGCG‑‑‑‑AA‑‑‑‑CT‑GGCTACAG‑CTGAAGGATTG‑ATTGC‑GTT‑‑GTGACGGGATGAACGACGCCGAAATGCTG > NC_000913/4008309‑4008458 |||| gCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCG‑‑‑‑a < 1:712134/93‑1 (MQ=255)gCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTTCAAAAAGCCATGCGCTGGAAGCGGTGGCG‑‑‑‑a > 1:7950130/1‑93 (MQ=255) cGATCGCGTCAATGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGGGTCAAAAGGCCATGCGCTGGAAGCGGTGGCG‑‑‑‑aa > 2:8947093/1‑93 (MQ=255) cGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGTGCTGGAAGCGGTGGCG‑‑‑‑aa < 2:6364701/93‑1 (MQ=255) cGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCG‑‑‑‑aa < 1:2607125/93‑1 (MQ=255) cGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCG‑‑‑‑aa < 2:8640424/93‑1 (MQ=255) gATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGCTTCAAAAGGCCATGCGCTGGAAGCGGTGGCG‑‑‑‑aag > 1:6295637/1‑92 (MQ=255) aTCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCCTGCGCTGGAAGCGGTGGCG‑‑‑‑aaga > 1:9955995/1‑91 (MQ=255) tCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGGAGCGGTGGCG‑‑‑‑aagaa > 1:6062766/1‑90 (MQ=255) cgcgTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCG‑‑‑‑aagaaa < 2:8301252/93‑5 (MQ=255) cgcgTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCG‑‑‑‑aagaaa < 2:2434993/93‑5 (MQ=255) tCTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtt < 2:6362410/93‑1 (MQ=255) tCTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtt < 1:7177307/93‑1 (MQ=255) cTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑Gttt > 2:3112731/1‑92 (MQ=255) cTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑Gttt > 2:5960747/1‑92 (MQ=255) cTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑Gttt < 1:1148820/93‑2 (MQ=255) cTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑Gttt > 2:2016160/1‑92 (MQ=255) tGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtttg > 1:9334969/1‑91 (MQ=255) tGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtttg > 1:6088940/1‑91 (MQ=255) tGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtttg < 2:3652544/93‑3 (MQ=255) ggAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtttgg < 2:5823044/93‑4 (MQ=255) ggAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtttgg < 2:2132598/93‑4 (MQ=255) ggAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtttgg > 1:1532792/1‑90 (MQ=255) gAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtttggt < 1:6573968/93‑5 (MQ=255) gAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtttggt < 1:6889041/93‑5 (MQ=255) gAAGTGATGGCGGGCGGCGTGTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtttggt < 2:861771/93‑5 (MQ=255) aTGGCGGGCGGCGTTTCGAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACggg < 1:8977973/93‑1 (MQ=255) aTGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACggg > 1:750883/1‑93 (MQ=255) aTGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACggg > 2:3448880/1‑93 (MQ=255) tGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGa < 2:2881758/93‑1 (MQ=255) tGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGa < 2:8409837/93‑1 (MQ=255) ggcgggcgGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGAt < 2:1818924/93‑1 (MQ=255) ggcgggcgGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGAt < 1:3963700/93‑1 (MQ=255) ggcgggcgGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGAt > 1:3153169/1‑93 (MQ=255) ggcgggcgGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGAt > 2:8863266/1‑93 (MQ=255) ggcgggcgGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGAt < 2:4646743/93‑1 (MQ=255) gcgggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATg < 2:3031378/93‑1 (MQ=255) gcgggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATg < 2:8626408/93‑1 (MQ=255) gggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGaa < 1:9500316/93‑1 (MQ=255) gggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGaa < 1:3076046/93‑1 (MQ=255) gggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGaa < 2:7651843/93‑1 (MQ=255) gggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGaa > 1:1242716/1‑93 (MQ=255) ggcggcGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAac < 1:10002085/93‑1 (MQ=255) ggcggcGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAac < 2:4349308/93‑1 (MQ=255) ggcggcGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAac > 1:8626919/1‑93 (MQ=255) ggcggcGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAac > 1:8626918/1‑93 (MQ=255) ggcggcGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAac < 2:7374816/93‑1 (MQ=255) ggcggcGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAac > 1:5145751/1‑93 (MQ=255) gcggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAacg > 1:2907039/1‑93 (MQ=255) gcggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAacg < 2:5280233/93‑1 (MQ=255) gcggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGAGTGTATTGCGGTTG‑GTGACGGGATGAacg > 1:6401998/1‑93 (MQ=255) cggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAacga < 2:641982/93‑1 (MQ=255) cggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAacga > 1:4095124/1‑93 (MQ=255) cggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAacga < 1:10033062/93‑1 (MQ=255) ggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAacgac < 2:1182648/93‑1 (MQ=255) ggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAacgac > 1:2739865/1‑93 (MQ=255) ggcgTTTCAAAAGGCCATGCGCTGGAAGCGGGGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAacgac > 1:2868802/1‑93 (MQ=255) gcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAacgacg > 2:3783878/1‑93 (MQ=255) gcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAacgacg > 2:5876638/1‑93 (MQ=255) gcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAacgacg > 1:9759049/1‑93 (MQ=255) cgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGc < 1:648139/93‑1 (MQ=255) cgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGc < 1:4552484/93‑1 (MQ=255) gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGcc < 1:6408410/93‑1 (MQ=255) gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGcc > 1:7202564/1‑93 (MQ=255) gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGcc > 1:2422851/1‑93 (MQ=255) gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGcc > 1:8630491/1‑93 (MQ=255) gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTNGGTGACGGGATGAACGACGcg > 1:8760513/1‑92 (MQ=255) gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCG‑‑‑‑AAGAATCTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTGGGTGACGGGATGAACGACGcc < 2:9151104/93‑1 (MQ=255) ttcaaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGCCGCCGa > 2:3275039/5‑93 (MQ=255) ttcaaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGa > 1:2638946/5‑93 (MQ=255) ttcaaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGa > 1:4004406/5‑93 (MQ=255) ttcaaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGa > 1:4615904/5‑93 (MQ=255) tcaaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGaa > 2:5931017/4‑93 (MQ=255) tcaaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGaa < 2:776121/90‑1 (MQ=255) tcaaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGaa > 2:6112688/4‑93 (MQ=255) tcaaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGaa > 2:7328160/4‑93 (MQ=255) tcaaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGaa > 2:7064425/4‑93 (MQ=255) tcaaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGaa < 1:1680756/90‑1 (MQ=255) taaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGaaa < 1:8741687/91‑1 (MQ=255) caaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGaaa < 1:2353815/91‑1 (MQ=255) caaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGaaa < 2:6411942/91‑1 (MQ=255) caaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGaaa < 2:6578561/91‑1 (MQ=255) caaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGaaa < 2:318095/91‑1 (MQ=255) caaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGaaa < 2:6578560/91‑1 (MQ=255) aaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAAt > 2:6351003/2‑93 (MQ=255) aaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAAt > 1:865711/2‑93 (MQ=255) aaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAAt > 1:798070/2‑93 (MQ=255) aaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATg > 2:2286238/1‑93 (MQ=255) aaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATg > 2:6404630/1‑93 (MQ=255) aaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATg > 1:160295/1‑93 (MQ=255) aaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATg < 2:5419476/93‑1 (MQ=255) aaaGGCCATGCGCTGGAAGCGGTGGCG‑‑‑‑AAGAATCTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATg < 1:181652/93‑1 (MQ=255) aaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGc < 2:7954981/93‑1 (MQ=255) aaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGc < 1:2939580/93‑1 (MQ=255) aGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGcg > 2:7669372/1‑92 (MQ=255) aGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCt > 1:5588573/1‑93 (MQ=255) aGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCt < 1:2133690/93‑1 (MQ=255) aGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCt > 1:5588572/1‑93 (MQ=255) aGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCt < 1:9889411/93‑1 (MQ=255) ggCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTg < 2:7244493/93‑1 (MQ=255) |||| GCGATCGCGTCAACGTCAGTTTCTCTACCTTAACCTGTCTGGAAGTGATGGCGGGCGGCGTTTC‑AAAGGCCATGCGCTGGAAG‑GCTGGCG‑‑‑‑AA‑‑‑‑CT‑GGCTACAG‑CTGAAGGATTG‑ATTGC‑GTT‑‑GTGACGGGATGAACGACGCCGAAATGCTG > NC_000913/4008309‑4008458 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |