BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,008,404	+G	coding (487/516 nt)	b4555 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,008,402	1	.	G	100.0%	384.4 / NA	118	L162R (CTG→CGG)	b4555	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (0/0); new base G (50/68); total (50/68)

Only 100 of 118 total aligned reads displayed.

TCTGGAAGTGATGGCGGGCGGC‑GTTTC‑AAAGGCCATGCGCTGGAAG‑GCTGGCG‑‑‑‑AA‑‑‑‑CT‑GGCTACAG‑CTGAAGGATTG‑ATTGC‑GTT‑‑GTGACGGGATGAACGACGCCGAAATGCTG  >  NC_000913/4008346‑4008458

tCTGGAAGTGATGGCGGGCGGC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtt                                 <  2:6362410/93‑1 (MQ=255)

tCTGGAAGTGATGGCGGGCGGC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtt                                 <  1:7177307/93‑1 (MQ=255)

tCTGGAAGTGATGGCGGGCGGC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtt                                 >  1:2676227/1‑93 (MQ=255)

tCTGGAAGTGATGGCGGGCGGC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtt                                 <  1:2396856/93‑1 (MQ=255)

 cTGGAAGTGATGGCGGGCGGC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑Gttt                                <  1:1148820/93‑2 (MQ=255)

 cTGGAAGTGATGGCGGGCGGC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑Gttt                                <  1:8582882/93‑2 (MQ=255)

 cTGGAAGTGATGGCGGGCGGC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑Gttt                                >  2:3112731/1‑92 (MQ=255)

 cTGGAAGTGATGGCGGGCGGC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑Gttt                                >  2:5960747/1‑92 (MQ=255)

  tGGAAGTGATGGCGGGCGGC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtttg                               >  1:9334969/1‑91 (MQ=255)

  tGGAAGTGATGGCGGGCGGC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtttg                               >  1:6088940/1‑91 (MQ=255)

  tGGAAGTGATGGCGGGCGGC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtttg                               <  2:3652544/93‑3 (MQ=255)

   ggAAGTGATGGCGGGCGGC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtttgg                              <  1:6426558/93‑4 (MQ=255)

   ggAAGTGATGGCGGGCGGC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtttgg                              <  2:5823044/93‑4 (MQ=255)

   ggAAGTGATGGCGGGCGGC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtttgg                              <  1:864717/93‑4 (MQ=255)

   ggAAGTGATGGCGGGCGGC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtttgg                              <  1:5231951/93‑4 (MQ=255)

   ggAAGTGATGGCGGGCGGC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtttgg                              <  2:3772049/93‑4 (MQ=255)

   ggAAGTGATGGCGGGCGGC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtttgg                              <  2:2132599/93‑4 (MQ=255)

   ggAAGTGATGGCGGGCGGC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtttgg                              <  2:2132598/93‑4 (MQ=255)

   ggAAGTGATGGCGGGCGGC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtttgg                              >  1:1532792/1‑90 (MQ=255)

    gAAGTGATGGCGGGCGGC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtttggt                             <  1:6889041/93‑5 (MQ=255)

    gAAGTGATGGCGGGCGGC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtttggt                             <  2:4966347/93‑5 (MQ=255)

    gAAGTGATGGCGGGCGGC‑GTGTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtttggt                             <  2:861771/93‑5 (MQ=255)

          aTGGCGGGCGGC‑GTTTCGAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACggg                       <  1:8977973/93‑1 (MQ=255)

          aTGGCGGGCGGC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACggg                       >  2:3448880/1‑93 (MQ=255)

           tGGCGGGCGGCAGTTCA‑AAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGa                      <  1:9596275/93‑1 (MQ=255)

           tGGCGGGCGGC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGa                      <  2:8409837/93‑1 (MQ=255)

           tGGCGGGCGGC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGa                      <  1:1803182/93‑1 (MQ=255)

           tGGCGGGCGGC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGa                      <  1:7474635/93‑1 (MQ=255)

           tGGCGGGCGGC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGa                      <  2:2881758/93‑1 (MQ=255)

            ggcgggcgGC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGAt                     <  1:7120218/93‑1 (MQ=255)

            ggcgggcgGC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGAt                     <  2:1818924/93‑1 (MQ=255)

            ggcgggcgGC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGAt                     <  2:4646743/93‑1 (MQ=255)

            ggcgggcgGC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGAt                     <  1:3963700/93‑1 (MQ=255)

            ggcgggcgGC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGAt                     >  1:3153169/1‑93 (MQ=255)

            ggcgggcgGC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGAt                     >  2:8863266/1‑93 (MQ=255)

             gcgggcggC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATg                    <  2:6051594/93‑1 (MQ=255)

             gcgggcggC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATg                    <  2:8626408/93‑1 (MQ=255)

             gcgggcggC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATg                    <  2:3031378/93‑1 (MQ=255)

               gggcggC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGaa                  <  1:8916742/93‑1 (MQ=255)

               gggcggC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGaa                  <  1:3076046/93‑1 (MQ=255)

               gggcggC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGaa                  <  2:7651843/93‑1 (MQ=255)

               gggcggC‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGaa                  >  1:1242716/1‑93 (MQ=255)

                ggcggc‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAac                 <  1:10002085/93‑1 (MQ=255)

                ggcggc‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAac                 >  1:8626919/1‑93 (MQ=255)

                ggcggc‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAac                 >  1:8626918/1‑93 (MQ=255)

                ggcggc‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAac                 <  2:4349308/93‑1 (MQ=255)

                ggcggc‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAac                 >  1:5145751/1‑93 (MQ=255)

                ggcggc‑GTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAac                 <  2:7374816/93‑1 (MQ=255)

                 gcggc‑gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAacg                <  2:5280233/93‑1 (MQ=255)

                 gcggc‑gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAacg                >  1:2907039/1‑93 (MQ=255)

                 gcggc‑gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGAGTGTATTGCGGTTG‑GTGACGGGATGAacg                >  1:6401998/1‑93 (MQ=255)

                  cggc‑gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAacga               <  2:641982/93‑1 (MQ=255)

                  cggc‑gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAacga               <  1:10033062/93‑1 (MQ=255)

                  cggc‑gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAacga               <  2:175524/93‑1 (MQ=255)

                  cggc‑gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAacga               >  1:4095124/1‑93 (MQ=255)

                   ggc‑gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAacgac              >  1:2739865/1‑93 (MQ=255)

                   ggc‑gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAacgac              <  2:1182648/93‑1 (MQ=255)

                   ggc‑gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAacgac              <  2:8753943/93‑1 (MQ=255)

                   ggc‑gTTTCAAAAGGCCATGCGCTGGAAGCGGGGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAacgac              >  1:2868802/1‑93 (MQ=255)

                    gc‑gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAacgacg             >  1:6196121/1‑93 (MQ=255)

                    gc‑gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAacgacg             >  2:5876638/1‑93 (MQ=255)

                    gc‑gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAacgacg             >  1:9759049/1‑93 (MQ=255)

                     c‑gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGc            <  1:648139/93‑1 (MQ=255)

                     c‑gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGc            <  1:4552484/93‑1 (MQ=255)

                       gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGcc           >  1:7202564/1‑93 (MQ=255)

                       gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGcc           <  1:6408410/93‑1 (MQ=255)

                       gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGcc           <  2:6448755/93‑1 (MQ=255)

                       gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGcc           <  2:795387/93‑1 (MQ=255)

                       gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGcc           >  1:8630491/1‑93 (MQ=255)

                       gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTNGGTGACGGGATGAACGACGcg           >  1:8760513/1‑92 (MQ=255)

                       gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCG‑‑‑‑AAGAATCTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTGGGTGACGGGATGAACGACGcc           <  2:9151104/93‑1 (MQ=255)

                         ttcaaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGCCGCCGa         >  2:3275039/5‑93 (MQ=255)

                         ttcaaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGa         >  1:2638946/5‑93 (MQ=255)

                         ttcaaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGa         >  1:4004406/5‑93 (MQ=255)

                         ttcaaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGa         >  1:4615904/5‑93 (MQ=255)

                         ttcaaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGa         >  2:3275038/5‑93 (MQ=255)

                          tcaaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGaa        >  2:7328160/4‑93 (MQ=255)

                          tcaaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGaa        <  1:1680756/90‑1 (MQ=255)

                          tcaaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGaa        >  2:7064425/4‑93 (MQ=255)

                          tcaaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGaa        <  2:776121/90‑1 (MQ=255)

                          tcaaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGaa        >  2:6112688/4‑93 (MQ=255)

                          tcaaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGaa        >  2:5931017/4‑93 (MQ=255)

                           taaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGaaa       <  1:8741687/91‑1 (MQ=255)

                           caaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGaaa       <  2:6578560/91‑1 (MQ=255)

                           caaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGaaa       <  1:2353815/91‑1 (MQ=255)

                           caaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGaaa       <  2:6411942/91‑1 (MQ=255)

                            aaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAAt      >  1:798070/2‑93 (MQ=255)

                             aaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATg     >  2:6404630/1‑93 (MQ=255)

                             aaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATg     >  2:2286238/1‑93 (MQ=255)

                             aaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATg     <  2:5419476/93‑1 (MQ=255)

                             aaaGGCCATGCGCTGGAAGCGGTGGCG‑‑‑‑AAGAATCTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATg     <  1:181652/93‑1 (MQ=255)

                              aaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGc    <  1:2939580/93‑1 (MQ=255)

                              aaGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGc    <  2:7954981/93‑1 (MQ=255)

                               aGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGcg   >  2:7669372/1‑92 (MQ=255)

                               aGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCt   <  1:2133690/93‑1 (MQ=255)

                               aGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCt   >  1:5588572/1‑93 (MQ=255)

                               aGGCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCt   <  1:9889411/93‑1 (MQ=255)

                                ggCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTg  <  2:7244493/93‑1 (MQ=255)

                                ggCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTg  <  2:7244492/93‑1 (MQ=255)

                                ggCCATGCGCTGGAAGCGGTGGCGAAGAAA‑‑‑‑CTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTg  >  1:1345442/1‑93 (MQ=255)

TCTGGAAGTGATGGCGGGCGGC‑GTTTC‑AAAGGCCATGCGCTGGAAG‑GCTGGCG‑‑‑‑AA‑‑‑‑CT‑GGCTACAG‑CTGAAGGATTG‑ATTGC‑GTT‑‑GTGACGGGATGAACGACGCCGAAATGCTG  >  NC_000913/4008346‑4008458

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`