BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,008,421	+T	coding (504/516 nt)	b4555 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,008,421	1	.	T	100.0%	676.7 / NA	186	L168F (TTG→TTT)	b4555	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (0/0); new base T (80/106); total (80/106)

Only 100 of 190 total aligned reads displayed.

TCTGGAAGTGATGGCGGGCGGCGTTTC‑AAAGGCCATGCGCTGGAAG‑GCTGGCG‑‑‑‑AACT‑GGCTACAG‑CTGAAGGATTG‑ATTGC‑GTT‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GG‑G‑‑AAA‑GCTGCATTATGGGCAGTGGCCACCAGCGTCT  >  NC_000913/4008346‑4008503

tCTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtt                                                                                   <  2:6362410/93‑1 (MQ=255)

tCTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtt                                                                                   <  1:7177307/93‑1 (MQ=255)

tCTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtt                                                                                   <  1:2396856/93‑1 (MQ=255)

 cTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑Gttt                                                                                  <  1:1148820/93‑2 (MQ=255)

 cTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑Gttt                                                                                  >  2:3112731/1‑92 (MQ=255)

  tGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtttg                                                                                 >  1:6088940/1‑91 (MQ=255)

  tGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtttg                                                                                 >  1:4350676/1‑91 (MQ=255)

   ggAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtttgg                                                                                >  1:1532792/1‑90 (MQ=255)

   ggAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtttgg                                                                                <  2:2132599/93‑4 (MQ=255)

   ggAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtttgg                                                                                <  2:5823044/93‑4 (MQ=255)

   ggAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtttgg                                                                                <  2:3772049/93‑4 (MQ=255)

    gAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑Gtttggt                                                                               <  2:4966347/93‑5 (MQ=255)

          aTGGCGGGCGGCGTTTCGAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACggg                                                                         <  1:8977973/93‑1 (MQ=255)

          aTGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACggg                                                                         >  1:750883/1‑93 (MQ=255)

          aTGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACggg                                                                         >  2:3448880/1‑93 (MQ=255)

           tGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGa                                                                        <  2:2881758/93‑1 (MQ=255)

           tGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGa                                                                        <  2:8409837/93‑1 (MQ=255)

           tGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGa                                                                        <  1:1803182/93‑1 (MQ=255)

           tGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGa                                                                        <  1:7474635/93‑1 (MQ=255)

            ggcgggcgGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGAt                                                                       <  1:3963700/93‑1 (MQ=255)

            ggcgggcgGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGAt                                                                       <  2:1818924/93‑1 (MQ=255)

             gcgggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATg                                                                      <  2:8626408/93‑1 (MQ=255)

             gcgggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATg                                                                      <  2:6051594/93‑1 (MQ=255)

               gggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGaa                                                                    <  1:9500316/93‑1 (MQ=255)

                ggcggcGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAac                                                                   <  2:7374816/93‑1 (MQ=255)

                ggcggcGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAac                                                                   >  1:8626918/1‑93 (MQ=255)

                ggcggcGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAac                                                                   <  1:10002085/93‑1 (MQ=255)

                ggcggcGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAac                                                                   >  1:5145751/1‑93 (MQ=255)

                ggcggcGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAac                                                                   <  2:4349308/93‑1 (MQ=255)

                 gcggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAacg                                                                  >  1:2907039/1‑93 (MQ=255)

                 gcggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGAGTGTATTGCGGTTG‑GTGACGGGATGAacg                                                                  >  1:6401998/1‑93 (MQ=255)

                  cggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAacga                                                                 <  1:10033062/93‑1 (MQ=255)

                  cggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAacga                                                                 <  2:641982/93‑1 (MQ=255)

                   ggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAacgac                                                                >  1:2739865/1‑93 (MQ=255)

                   ggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAacgac                                                                <  2:8753943/93‑1 (MQ=255)

                    gcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAacgacg                                                               >  2:5876638/1‑93 (MQ=255)

                    gcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAacgacg                                                               >  1:9759049/1‑93 (MQ=255)

                     cgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGc                                                              <  1:4552484/93‑1 (MQ=255)

                      gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGcc                                                             >  1:7202564/1‑93 (MQ=255)

                      gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGcc                                                             >  1:8630491/1‑93 (MQ=255)

                      gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGcc                                                             <  2:795387/93‑1 (MQ=255)

                      gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGcc                                                             <  1:6408410/93‑1 (MQ=255)

                      gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTNGGTGACGGGATGAACGACGcg                                                             >  1:8760513/1‑92 (MQ=255)

                        ttcaaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGa                                                           >  1:4004406/5‑93 (MQ=255)

                        ttcaaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGa                                                           >  2:3275038/5‑93 (MQ=255)

                        ttcaaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGa                                                           >  1:2638946/5‑93 (MQ=255)

                         tcaaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGaa                                                          >  2:5931017/4‑93 (MQ=255)

                         tcaaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGaa                                                          >  2:7064425/4‑93 (MQ=255)

                          caaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGaaa                                                         <  2:6578561/91‑1 (MQ=255)

                          caaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGaaa                                                         <  1:2353815/91‑1 (MQ=255)

                          caaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGaaa                                                         <  2:6411942/91‑1 (MQ=255)

                           aaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAAt                                                        >  1:865711/2‑93 (MQ=255)

                           aaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAAt                                                        >  2:8595104/2‑93 (MQ=255)

                           aaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAAt                                                        >  2:6351003/2‑93 (MQ=255)

                            aaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATg                                                       <  2:5419476/93‑1 (MQ=255)

                            aaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATg                                                       >  1:160295/1‑93 (MQ=255)

                             aaGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGc                                                      <  1:2939580/93‑1 (MQ=255)

                              aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGcg                                                     >  2:7669372/1‑92 (MQ=255)

                              aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCt                                                     >  1:5588572/1‑93 (MQ=255)

                               ggCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTg                                                    <  2:7244493/93‑1 (MQ=255)

                               ggCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTg                                                    >  1:1345442/1‑93 (MQ=255)

                                                            actgggCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATggg                    <  1:8996608/89‑1 (MQ=255)

                                                            actgggCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATggg                    <  2:10047426/89‑1 (MQ=255)

                                                            actgggCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATggg                    >  1:7427623/5‑93 (MQ=255)

                                                            actgggCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATggg                    >  1:7644453/5‑93 (MQ=255)

                                                             ctgggCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGCAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATCGGc                   >  2:7442846/4‑93 (MQ=255)

                                                             ctgggCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGc                   <  1:3790479/90‑1 (MQ=255)

                                                             ctgggCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGc                   >  1:5283558/4‑93 (MQ=255)

                                                              tgggCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCa                  <  2:9225273/91‑1 (MQ=255)

                                                              tgggCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCa                  <  1:6431365/91‑1 (MQ=255)

                                                               gggCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAATGCTGCATTATGGGCAg                 <  2:9560886/92‑1 (MQ=255)

                                                                 gCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTg               <  2:9885562/93‑1 (MQ=255)

                                                                 gCTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGAAGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTg               <  1:6885365/93‑1 (MQ=255)

                                                                  cTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTgc              >  1:7893199/1‑92 (MQ=255)

                                                                  cTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTgc              <  1:6556074/93‑2 (MQ=255)

                                                                  cTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTgc              >  2:7560954/1‑92 (MQ=255)

                                                                  cTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTgc              >  2:3591843/1‑92 (MQ=255)

                                                                  cTACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTgc              <  2:1340347/93‑2 (MQ=255)

                                                                   tACAGCCTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTgcg             <  1:6646566/93‑3 (MQ=255)

                                                                       gccTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCgcacc         <  2:9121825/91‑1 (MQ=255)

                                                                       gccTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCgcacc         <  1:2179859/91‑1 (MQ=255)

                                                                        ccTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCgcacca        >  2:2557917/2‑93 (MQ=255)

                                                                         cTGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAg       <  1:467010/93‑1 (MQ=255)

                                                                          tGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGc      >  2:2119997/1‑93 (MQ=255)

                                                                          tGAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGc      >  1:4394163/1‑93 (MQ=255)

                                                                           gAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGTTGCATTATGGGCAGTGCGCACCAGCg     >  1:2268480/1‑93 (MQ=255)

                                                                           gAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCg     >  2:2587365/1‑93 (MQ=255)

                                                                           gAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCg     >  1:338086/1‑93 (MQ=255)

                                                                           gAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCg     >  2:6486777/1‑93 (MQ=255)

                                                                           gAAGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCg     <  2:4683520/93‑1 (MQ=255)

                                                                            aaGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGt    <  2:1114875/93‑1 (MQ=255)

                                                                            aaGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGt    <  1:3151164/93‑1 (MQ=255)

                                                                            aaGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGt    >  1:7039115/1‑93 (MQ=255)

                                                                            aaGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGt    <  2:5732570/93‑1 (MQ=255)

                                                                            aaGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGt    >  1:8016447/1‑93 (MQ=255)

                                                                             aGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTc   >  2:7801316/1‑93 (MQ=255)

                                                                             aGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTc   <  1:2424306/93‑1 (MQ=255)

                                                                             aGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGG‑G‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTc   <  1:2050830/93‑1 (MQ=255)

                                                                             aGGATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGCG‑‑AAAGGCTGCATTATGGGCAGTGCGCACCAGCGTc   >  1:9231384/1‑93 (MQ=255)

                                                                              ggATTGTATTGC‑GTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATTGC‑GG‑GGCAAG‑GCTGCATTATGGGCAGTGCGCACCAGCGTCt  >  2:4046463/1‑93 (MQ=255)

TCTGGAAGTGATGGCGGGCGGCGTTTC‑AAAGGCCATGCGCTGGAAG‑GCTGGCG‑‑‑‑AACT‑GGCTACAG‑CTGAAGGATTG‑ATTGC‑GTT‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GG‑G‑‑AAA‑GCTGCATTATGGGCAGTGGCCACCAGCGTCT  >  NC_000913/4008346‑4008503

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`