BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,013,717	+G	coding (3/999 nt)	ysgA ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,013,717	1	.	G	99.8%	1579.9 / ‑4.7	491	coding (3/999 nt)	ysgA	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (1/0); new base G (296/194); total (297/194)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 525 total aligned reads displayed.

TAAGCAGGCATGTTATCCCCTTGTG‑AAGGGATAGAGGTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGC‑AT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑C‑CTTATAAAAATGTTGCGCAATGTTAACTATA  >  NC_000913/4013625‑4013802

aaaGCAGCCATGTTACCCCTTTGTG‑AGGGGAGAGAGGTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGc                                                                                           <  2:8393280/92‑1 (MQ=255)

  aGCAGGCATGTTATCCCCTTGTG‑AAGGGATAGAGGTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGcga                                                                                         >  2:1784925/1‑91 (MQ=255)

   gCAGGCATGTTATCCCCTTGTG‑AAGGGATAGAGGTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGcgat                                                                                        >  2:358494/1‑90 (MQ=255)

      ggCATGTTATCCCCTTGTG‑AAGGGATAGAGGTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGcgat                                                                                        >  1:284156/1‑87 (MQ=255)

      ggCATGTTATCCCCTTGTG‑AAGGGATAGAGGTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑gca                                                                                    >  1:4936977/1‑93 (MQ=255)

       gCATGTTATCCCCTTGTG‑AAGGGATAGAGGTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑gcag                                                                                   >  1:624505/1‑93 (MQ=255)

        cATGTTATCCCCTTGTG‑AAGGGATAGAGGTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑gcagc                                                                                  >  2:5930971/1‑93 (MQ=255)

        cATGTTACCCCCTTGTG‑AGGGGATAGAGGTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑gcagc                                                                                  <  1:7662949/93‑1 (MQ=255)

         aTGTTATCCCCTTGTG‑AAGGGATAGAGGTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑gcagca                                                                                 >  2:10007536/1‑93 (MQ=255)

         aTGTTACCCCCTTGTG‑AGGGGATAGAGTTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑gcagca                                                                                 <  2:5392145/93‑1 (MQ=255)

         aTGTTA‑CCCCTTGGGAAAGGGATAGAGGGAAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑gcagca                                                                                 <  1:3931807/93‑1 (MQ=255)

          tGTTATCCCCTTGTG‑AAGGGATAGAGGTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑Gcagcag                                                                                >  2:8254732/1‑93 (MQ=255)

          tGTTATCCCCTTGTG‑AAGGGATAGAGGTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑Gcagcag                                                                                >  1:2765604/1‑93 (MQ=255)

           gTTATCCCCTTGTG‑AAGGGATAGAGGTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAgg                                                                               >  1:4225757/1‑93 (MQ=255)

             tATCCCCTTGTG‑AAGGGATAGAGGTGAACCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTg                                                                             <  1:8772664/93‑1 (MQ=255)

              aTCCCCTTGTG‑AAGGGATAGAGGTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGc                                                                            >  2:34285/1‑93 (MQ=255)

               tCCCCTTGTG‑AAGGGATAGAGGTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCa                                                                           >  1:247179/1‑93 (MQ=255)

                ccccTTGTG‑AAGGGATAGAGGTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCaa                                                                          >  2:9815108/1‑93 (MQ=255)

                ccccTTGTG‑AAGGGATAGAGGTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAG‑GCAGCAGAGGCaa                                                                          >  1:2088423/1‑93 (MQ=255)

                 cccTTGTG‑AAGGGATAGAGGTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCaaa                                                                         >  1:9273579/1‑93 (MQ=255)

                   cTTGTG‑AAGGGATAGAGGTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATc                                                                       >  2:8936306/1‑93 (MQ=255)

                    ttGTG‑AAGGGATAGAGGTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATcc                                                                      >  1:2197759/1‑93 (MQ=255)

                     tgtg‑AAGGGATAGAGGTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCa                                                                     >  1:6042134/1‑93 (MQ=255)

                       tg‑AAGGGATAGAGGTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAgt                                                                   >  1:750785/1‑92 (MQ=255)

                        g‑AAGGGATAGAGGTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGAt                                                                  >  1:778337/1‑93 (MQ=255)

                        g‑AAGGGATAGAGGTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGAt                                                                  >  1:1084368/1‑93 (MQ=255)

                          aaGGGATAGAGGTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGAtt                                                                 >  2:4687017/1‑93 (MQ=255)

                            gggATAGAGGTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGAttgt                                                               <  2:3292620/93‑1 (MQ=255)

                             ggATAGAGGTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGAttgtt                                                              >  1:1591592/1‑93 (MQ=255)

                             ggATAGAGGTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGGGCAAATCCAGAttgtt                                                              >  2:7259997/1‑93 (MQ=255)

                               aTAGAGGTACAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATtgttgt                                                            <  2:6510259/93‑1 (MQ=255)

                                tAGAGGTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATtgttgtg                                                           >  2:8845888/1‑93 (MQ=255)

                                tAGAGGTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATtgttgtg                                                           >  1:7225406/1‑93 (MQ=255)

                                tAGAGGTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATtgttgtg                                                           >  1:7409225/1‑93 (MQ=255)

                                  gagGTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGCTGCAAATCCAGATtgttgtgtt                                                         >  2:9547797/1‑93 (MQ=255)

                                    ggTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAACCGAGAGGCGAT‑GCGGCAGGGGCAAATCCAGATTgttgttttgt                                                       >  1:7997034/1‑93 (MQ=255)

                                     gTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTgttgtt                                                      >  2:8554692/1‑93 (MQ=255)

                                     gTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTgttgtt                                                      >  1:830748/1‑93 (MQ=255)

                                     gTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGC‑GTAGCAGCAGGTGCAAATCCAGATTgttgtgttgtg                                                      >  1:9674493/1‑92 (MQ=255)

                                     gTGAACCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTgttgtt                                                      <  2:4873112/93‑1 (MQ=255)

                                      tGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGttgttg                                                     >  2:4314344/1‑93 (MQ=255)

                                         accccGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCa                                                  <  1:8954743/91‑1 (MQ=255)

                                         aGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCa                                                  >  1:530090/1‑93 (MQ=255)

                                           cccGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATg                                                >  2:4083147/1‑93 (MQ=255)

                                           cccGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATg                                                >  1:9830571/1‑93 (MQ=255)

                                           cccGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATg                                                <  1:1494664/93‑1 (MQ=255)

                                            ccGCCACAATCGCGTCGTCCGGGGTCTGAACGGTGGTCGAAGCTAGAGGCGAG‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATgg                                               <  1:9059595/93‑1 (MQ=255)

                                            ccGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATgg                                               <  2:6276869/93‑1 (MQ=255)

                                            ccGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATgg                                               >  1:6431225/1‑93 (MQ=255)

                                             cGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGt                                              >  2:2542470/1‑93 (MQ=255)

                                               ccACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTAt                                            >  1:1929761/1‑93 (MQ=255)

                                                cacaATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTAtt                                           <  2:2090987/93‑1 (MQ=255)

                                                cacaATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTAtt                                           >  1:8450058/1‑93 (MQ=255)

                                                 acaATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATtc                                          >  2:1431113/1‑93 (MQ=255)

                                                 acaATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATtc                                          <  1:4420393/93‑1 (MQ=255)

                                                  caATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATtct                                         >  2:2786687/1‑93 (MQ=255)

                                                   aaTCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATtctc                                        <  1:922019/93‑1 (MQ=255)

                                                   aaTCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATtctc                                        <  1:2683789/93‑1 (MQ=255)

                                                   aaTCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATtctc                                        <  2:7925995/93‑1 (MQ=255)

                                                   aaTCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATtctc                                        >  2:1514048/1‑93 (MQ=255)

                                                    aTCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTcc                                       >  2:2428393/1‑93 (MQ=255)

                                                     tCGCGTCGTCCGGTGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCTGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCg                                      <  2:9697300/93‑1 (MQ=255)

                                                       gcgTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTa                                    <  2:1120110/93‑1 (MQ=255)

                                                       gcgTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTa                                    >  1:859109/1‑93 (MQ=255)

                                                         gtcgtcCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑c‑c                                >  1:128748/1‑93 (MQ=255)

                                                           cgtcCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑c‑cct                              <  1:3050505/93‑3 (MQ=255)

                                                            gtcCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑c‑cctt                             <  1:575094/93‑4 (MQ=255)

                                                            gtcCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑c‑cctt                             >  1:3502647/1‑90 (MQ=255)

                                                             tcCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑c‑cgtta                            <  1:5867619/93‑5 (MQ=255)

                                                             tcCGGGGTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑c‑cctta                            >  2:6892587/1‑89 (MQ=255)

                                                                ggggTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATaa                          <  1:5131062/93‑1 (MQ=255)

                                                                ggggTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATaa                          >  2:3854621/1‑93 (MQ=255)

                                                                ggggTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATaa                          >  2:6668144/1‑93 (MQ=255)

                                                                ggggTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATaa                          <  1:1663746/93‑1 (MQ=255)

                                                                ggggTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATaa                          >  1:170852/1‑93 (MQ=255)

                                                                 gggTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATaaa                         <  2:2845245/93‑1 (MQ=255)

                                                                  ggTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATaaaa                        <  1:9479369/93‑1 (MQ=255)

                                                                   gTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATaaaaa                       <  2:5241699/93‑1 (MQ=255)

                                                                   gTCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATaaaaa                       <  1:3738288/93‑1 (MQ=255)

                                                                   gTCTGAACGATGATCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATaaaaa                       <  2:574661/93‑1 (MQ=255)

                                                                    tCTGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATaaaaag                      >  2:914828/1‑92 (MQ=255)

                                                                      tGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGt                    <  1:6581985/93‑1 (MQ=255)

                                                                      tGAACGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑CGCTTATAAAAATGt                    >  1:5625456/1‑93 (MQ=255)

                                                                         aCGATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTgc                 <  2:200465/93‑1 (MQ=255)

                                                                           gATGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTgcgc               >  2:8116775/1‑93 (MQ=255)

                                                                            aTGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCa              <  1:10030753/93‑1 (MQ=255)

                                                                            aTGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCa              >  1:6996895/1‑93 (MQ=255)

                                                                            aTGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCa              >  1:3128041/1‑93 (MQ=255)

                                                                             tGGTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCaa             <  2:9265763/93‑1 (MQ=255)

                                                                              ggTCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAAt            <  2:7673021/93‑1 (MQ=255)

                                                                                tCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGt          >  1:6927078/1‑93 (MQ=255)

                                                                                tCGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGt          >  2:156625/1‑93 (MQ=255)

                                                                                 cGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGtt         <  1:466916/93‑1 (MQ=255)

                                                                                 cGAAGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGtt         <  1:6811352/93‑1 (MQ=255)

                                                                                   aaGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTaa       <  2:7859364/93‑1 (MQ=255)

                                                                                   aaGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTaa       >  2:9460658/1‑93 (MQ=255)

                                                                                    aGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAAc      <  2:1181032/93‑1 (MQ=255)

                                                                                    aGCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAAc      >  1:3640485/1‑93 (MQ=255)

                                                                                     gCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACt     >  2:312874/1‑93 (MQ=255)

                                                                                     gCGAGAGGCGAT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTACC‑CTTATAAAAATGTTGCGCAATGTTAACt     >  2:5084427/1‑93 (MQ=255)

TAAGCAGGCATGTTATCCCCTTGTG‑AAGGGATAGAGGTGAAGCCCGCCACAATCGCGTCGTCCGGGGTCTGAACGATGGTCGAAGCGAGAGGC‑AT‑GCAGCAGGTGCAAATCCAGATTGTTGTGTTGTTGCCATGGTATTCTCCGTA‑C‑CTTATAAAAATGTTGCGCAATGTTAACTATA  >  NC_000913/4013625‑4013802

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`