| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,980,940 | +C | coding (1/363 nt) coding (627/627 nt) |
araH ← araH ← |
ABC‑type arabinose transport system permease component ABC‑type arabinose transport system permease component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,980,939 | 1 | . | C | 99.6% | 780.7 / ‑4.4 | 246 | coding (2/363 nt) | araH | ABC‑type arabinose transport system permease component |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base C (126/119); total (126/120) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.88e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 275 total aligned reads displayed.
CCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGG‑CTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACG > NC_000913/1980847‑1981024 | cAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGG‑c < 1:9495756/93‑1 (MQ=255) cAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGG‑c < 2:3098346/93‑1 (MQ=255) aGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGG‑cc > 2:5656056/1‑92 (MQ=255) aGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGG‑cc > 2:7660330/1‑92 (MQ=255) gAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGG‑cct < 2:4009561/93‑3 (MQ=255) gAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGG‑cct > 1:1831286/1‑91 (MQ=255) gAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGG‑cct < 1:8269505/93‑3 (MQ=255) aataatTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGG‑cctc > 1:4420418/1‑90 (MQ=255) ataatTCCGGCAATCGCTGATACAAGGCCTGAGAGAACAAAAATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGG‑cctct < 2:9244334/93‑5 (MQ=255) aatTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTc < 2:2149338/93‑1 (MQ=255) ccGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTc > 1:394441/1‑93 (MQ=255) cGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTcc < 1:8082591/93‑1 (MQ=255) cGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTcc > 2:1256853/1‑93 (MQ=255) ggCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTccc > 1:8830909/1‑93 (MQ=255) gCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCg > 2:3237009/1‑93 (MQ=255) cTATCCCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGc < 1:9091714/93‑1 (MQ=255) tATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGcc > 2:839530/1‑93 (MQ=255) tATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGcc < 2:8734600/93‑1 (MQ=255) tCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCaa < 1:5089634/93‑1 (MQ=255) cGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAAt < 1:10020609/93‑1 (MQ=255) cTGATACCAGGCCTGAGAGAACAAAGATAATAATTGTGGTGCGAACAACCGGTACACCCGCCCGACGCGGCGG‑CTCTTCGTTCCCGCCGATCg > 2:5162163/1‑93 (MQ=255) gATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGcc < 1:4508198/93‑1 (MQ=255) aTACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCa > 2:5400519/1‑93 (MQ=255) tcccAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAg < 2:5011860/91‑1 (MQ=255) tACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAg < 1:5258584/93‑1 (MQ=255) tACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAg < 1:1945356/93‑1 (MQ=255) aCCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAgg < 2:2533655/93‑1 (MQ=255) ccAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAggg < 2:1746092/93‑1 (MQ=255) cAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGgt < 1:1379913/93‑1 (MQ=255) ggCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGgtgt < 2:5918677/93‑1 (MQ=255) gCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGtt < 1:2837694/93‑1 (MQ=255) gCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGtt > 1:685076/1‑93 (MQ=255) gCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGtt > 2:6326455/1‑93 (MQ=255) ccTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTa > 1:4949432/1‑93 (MQ=255) ccTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTa > 2:9078882/1‑93 (MQ=255) ccTGAAAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACCCCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTa < 2:2510910/93‑1 (MQ=255) cTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTAc < 1:3662674/93‑1 (MQ=255) tGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACg > 1:4223668/1‑93 (MQ=255) gagagaACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGa > 1:4598112/1‑93 (MQ=255) gagagaACAAAGATAATAATTTGGGTGCAAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGa < 2:4663002/93‑1 (MQ=255) agagaACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGAc > 1:8342189/1‑93 (MQ=255) aaCTAAGAAAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGCCGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCaaa < 1:1305225/93‑1 (MQ=255) aaCAAAGATAATAATTTTGGTGCGAACAGCCGGCACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCaaa < 1:5059694/93‑1 (MQ=255) aaCAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCaag > 1:3112485/1‑92 (MQ=255) aaCAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCaaa < 2:1039677/93‑1 (MQ=255) aCAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAg < 2:4427195/93‑1 (MQ=255) cAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAgg > 2:3815267/1‑93 (MQ=255) cAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAgg < 2:8125090/93‑1 (MQ=255) cAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAgg > 1:5700935/1‑93 (MQ=255) cAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAgg < 2:5980871/93‑1 (MQ=255) cAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAgg > 1:6368485/1‑93 (MQ=255) aaaaGAAAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAgg < 1:8503053/92‑1 (MQ=255) aaaGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggt < 2:3014256/93‑1 (MQ=255) aaGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggtg < 2:7476480/93‑1 (MQ=255) aaGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggtg < 1:7877759/93‑1 (MQ=255) aaGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggcg > 2:9397606/1‑91 (MQ=255) gATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggtggt > 2:8538314/1‑93 (MQ=255) aataataATTTTGGTGCGACCAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggtggt < 1:9781110/92‑1 (MQ=255) taataaTTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGAGGttt > 2:9462373/1‑93 (MQ=255) taataaTTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGGGTTACGACCAAAGGTGGttt > 2:2757047/1‑93 (MQ=255) taataaTTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGCGTTACGACCAAAGGTGGttt > 1:545330/1‑93 (MQ=255) ataatTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTa < 2:1699289/93‑1 (MQ=255) ataatTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTa < 1:9003000/93‑1 (MQ=255) aatTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTAtt > 2:6187981/1‑93 (MQ=255) atTTTGGTGCGAACAACCGGTACCCCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTc < 2:8314050/93‑1 (MQ=255) atTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTc < 1:1671274/93‑1 (MQ=255) ttttGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTca > 1:5817691/1‑93 (MQ=255) ttttGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTca > 2:3559447/1‑93 (MQ=255) ttttGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGAGGTTTTATTca > 1:4123369/1‑93 (MQ=255) ttGGTGCGAACAACGGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTcagc < 1:3360572/93‑1 (MQ=255) tGGTGCGAACAACCGGTCCCCCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAACGGTGGTTTTATTcaaca < 2:8963119/93‑1 (MQ=255) tGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTcagca > 2:3615496/1‑93 (MQ=255) tGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTcagca < 1:7268267/93‑1 (MQ=255) tGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTcagca < 1:9583329/93‑1 (MQ=255) ggTGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTcagcag > 1:2115960/1‑93 (MQ=255) tGCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAgcagca < 1:4538451/93‑1 (MQ=255) gCGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCaa < 2:5391278/93‑1 (MQ=255) cGAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCaaa < 1:6565104/93‑1 (MQ=255) gAACAACCGGTACACCCGCCCGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCACAGGTGGTTTTATTCATCAGCaacc > 1:6068845/1‑91 (MQ=255) gAACAACCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAAc > 2:4461888/1‑93 (MQ=255) acaacCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCa > 1:7486465/1‑93 (MQ=255) acaacCGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCa > 1:293616/1‑93 (MQ=255) cacccGGTCCACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCaa < 2:3901148/90‑1 (MQ=255) ccGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGa < 2:6827798/93‑1 (MQ=255) cGGTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGAt < 2:2011401/93‑1 (MQ=255) ggTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATa > 2:9735910/1‑93 (MQ=255) ggTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATa < 1:4761138/93‑1 (MQ=255) gTACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATaa > 2:9612994/1‑93 (MQ=255) tACACCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAAt < 2:4227133/93‑1 (MQ=255) cacCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCa > 2:1566810/1‑93 (MQ=255) acCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATcca > 2:7157057/1‑91 (MQ=255) acCCGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCACCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAg > 1:9180068/1‑93 (MQ=255) cccGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGa > 1:2084921/1‑93 (MQ=255) ccGCCAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGac < 1:541653/93‑1 (MQ=255) cGCCAGCCGC‑ACGTCCTCTTCGTGCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGacc < 2:6511314/93‑2 (MQ=255) ccAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACAcg < 2:4709793/93‑1 (MQ=255) cAGACGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACAcgc > 2:2847693/1‑93 (MQ=255) aCGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGAc < 1:9257336/93‑1 (MQ=255) aCGC‑GCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGAc < 1:4993529/93‑1 (MQ=255) cgc‑gcgGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACg > 2:3454389/1‑93 (MQ=255) | CCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGC‑GCGG‑CTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACG > NC_000913/1980847‑1981024 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |