Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,458,650 +G intergenic (‑161/+20) b2342 ← / ← b2343 putative acyltransferase/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,458,6461.G99.2% 858.3 / ‑1.9 267intergenic (‑157/+24)b2342/b2343putative acyltransferase/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (1/1);  new base G (133/132);  total (134/133)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01

Only 100 of 299 total aligned reads displayed.

ACATTTAGCCAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCC  >  NC_000913/2458554‑2458733
                                                                                              |                                                                                        
aCATTTAGCCAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACa                                                                                           >  2:9688794/1‑93 (MQ=255)
aCATTTAGCCAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACa                                                                                           >  1:4344970/1‑93 (MQ=255)
  aTTTAGCCAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAgg                                                                                        <  2:5235499/93‑1 (MQ=255)
   tttAGCCAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAggg                                                                                       >  2:4216586/1‑93 (MQ=255)
    ttggCCAAGTGGAGAAAAGGGAAAGGGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAgggg                                                                                      <  2:2203295/90‑1 (MQ=255)
    ttAGCCAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAgggg                                                                                      <  2:2752549/93‑1 (MQ=255)
     tAGCCAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAggggg                                                                                     <  2:812973/93‑2 (MQ=255)
      aGCCAAGTGGATAAAAGGGAAAGTGGGAGCTATTACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAgggggc                                                                                    <  1:9347317/93‑3 (MQ=255)
        ccAAGTGGAGAAAAGGGAAAGTTGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCAAGCAACTGACAgggggcgt                                                                                  >  1:1837000/1‑89 (MQ=255)
           aGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGcgtacg                                                                               >  2:3717600/1‑93 (MQ=255)
               gagaAAAGAGAAGGGGGGAGCAATCACCCAGAAAAAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTAcc                                                                           <  1:3911104/93‑1 (MQ=255)
                agaAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTAccc                                                                          >  1:2809217/1‑93 (MQ=255)
                agaAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTAccc                                                                          >  1:3116698/1‑93 (MQ=255)
                  aaaaGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCga                                                                        <  1:6102391/93‑1 (MQ=255)
                    aaGGGAAAGGTGGGAGCAAGGACAAAGAGAAAAAAAAAAAAAAAAAAAAAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCgag                                                                       <  2:1952999/93‑1 (MQ=255)
                    aaGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCgaga                                                                      >  1:3847273/1‑93 (MQ=255)
                    aaGGGAAAGGGGGGGCAAAGACACAGAAAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCgaga                                                                      <  2:8041836/93‑1 (MQ=255)
                     aGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGagag                                                                     >  2:5034904/1‑93 (MQ=255)
                     aGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGagag                                                                     >  2:2339041/1‑93 (MQ=255)
                     aGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGagag                                                                     >  2:739160/1‑93 (MQ=255)
                        gAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGaa                                                                  <  2:3420814/93‑1 (MQ=255)
                         aaaGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAAt                                                                 <  2:8318953/93‑1 (MQ=255)
                             gTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTaa                                                              >  1:9914332/1‑93 (MQ=255)
                              tGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAAc                                                             >  1:3493703/1‑93 (MQ=255)
                              tGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAAc                                                             >  1:3189590/1‑93 (MQ=255)
                               gggAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACg                                                            >  2:6543038/1‑93 (MQ=255)
                                ggtgCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGc                                                           >  2:8544594/4‑93 (MQ=255)
                                 gAGCTATGACACAGAGATAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCa                                                          <  1:6504873/93‑1 (MQ=255)
                                 gAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCa                                                          <  2:2643611/93‑1 (MQ=255)
                                  aGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAg                                                         <  2:4871335/93‑1 (MQ=255)
                                  aGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAg                                                         <  1:10033432/93‑1 (MQ=255)
                                   gCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGa                                                        >  1:7253823/1‑93 (MQ=255)
                                    cTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGAc                                                       <  2:8680843/93‑1 (MQ=255)
                                     tATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGAcc                                                      >  2:3056038/1‑93 (MQ=255)
                                      aTGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGAccc                                                     >  2:2401601/1‑93 (MQ=255)
                                       tGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCa                                                    <  2:4586767/93‑1 (MQ=255)
                                          cacaGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCt                                                 >  2:9222126/1‑93 (MQ=255)
                                            caGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTgg                                               <  1:6641031/93‑1 (MQ=255)
                                            caGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTgg                                               >  2:6405523/1‑93 (MQ=255)
                                             agagagAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGa                                              >  1:2529796/1‑93 (MQ=255)
                                             agagagAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGa                                              >  1:5735711/1‑93 (MQ=255)
                                              gagagaAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTggca                                             >  2:2035006/1‑91 (MQ=255)
                                              gagagaAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGaa                                             >  1:1390503/1‑93 (MQ=255)
                                              gagagaAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGaa                                             <  1:4711827/93‑1 (MQ=255)
                                               agagaAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGaaa                                            <  1:2547625/93‑1 (MQ=255)
                                                gagaAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGaaaa                                           >  1:916885/1‑93 (MQ=255)
                                                gagaAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGaaaa                                           >  1:7009535/1‑93 (MQ=255)
                                                 agaAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAAt                                          >  1:3427242/1‑93 (MQ=255)
                                                 agaAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAAt                                          >  1:8392833/1‑93 (MQ=255)
                                                 agaAAAAAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAAt                                          <  2:4475352/93‑1 (MQ=255)
                                                       gaagaagaGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCAt                                    >  2:9383911/1‑93 (MQ=255)
                                                       gaagaagaGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCAt                                    >  2:6341883/1‑93 (MQ=255)
                                                        aagaagaGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCAtt                                   >  2:7899601/1‑93 (MQ=255)
                                                        aagaagaAAAAAAAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCAtt                                   <  1:5534403/93‑1 (MQ=255)
                                                         agaagaGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCAttt                                  >  2:1496726/1‑93 (MQ=255)
                                                         agaagaGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCAttt                                  >  1:5840141/1‑93 (MQ=255)
                                                          gaagaGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTc                                 <  2:1289961/93‑1 (MQ=255)
                                                          gaagaGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCACCATTTc                                 >  1:633091/1‑93 (MQ=255)
                                                           aagaGAGAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCa                                >  2:7206955/1‑93 (MQ=255)
                                                           aagaGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCa                                >  1:1019260/1‑93 (MQ=255)
                                                            agagAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAg                               >  1:7843034/1‑93 (MQ=255)
                                                             gagaAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGTCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGc                              <  1:8020377/93‑1 (MQ=255)
                                                                 aaagaaaaCGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCg                          <  1:50611/93‑1 (MQ=255)
                                                                 aaagaaaaCGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCg                          >  1:6011100/1‑93 (MQ=255)
                                                                 aaagaaaaCGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCg                          >  1:9628378/1‑93 (MQ=255)
                                                                 aaagaaaaCGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCg                          <  1:8480700/93‑1 (MQ=255)
                                                                  aagaaaaCGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGc                         >  2:8075311/1‑93 (MQ=255)
                                                                   ataaaaCGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCa                        <  1:3663763/91‑1 (MQ=255)
                                                                   agaaaaCGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCa                        >  1:2201464/1‑93 (MQ=255)
                                                                   agaaaaCGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCa                        <  1:200458/93‑1 (MQ=255)
                                                                   agaaaaCGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCa                        >  2:180581/1‑93 (MQ=255)
                                                                      aaaCGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGc                     <  2:758617/93‑1 (MQ=255)
                                                                        aCGCCCCTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCaa                   >  1:7423087/1‑93 (MQ=255)
                                                                           ccccTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAg                <  2:2770952/93‑1 (MQ=255)
                                                                           ccccTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAg                >  2:7766544/1‑93 (MQ=255)
                                                                           ccccTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAg                >  2:7055575/1‑93 (MQ=255)
                                                                            cccTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAgg               >  1:5314417/1‑92 (MQ=255)
                                                                            cccTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGt               >  1:1127736/1‑93 (MQ=255)
                                                                            cccTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGt               >  2:8924100/1‑93 (MQ=255)
                                                                             ccTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGCAAATCAGCATTTCAGCTTCGCAGGCAAAAGTg              >  1:7150420/1‑93 (MQ=255)
                                                                             ccTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTg              >  2:5520426/1‑93 (MQ=255)
                                                                             ccTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTg              >  2:6124175/1‑93 (MQ=255)
                                                                              cTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGa             <  1:5905502/93‑1 (MQ=255)
                                                                              cTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGa             <  1:3270112/93‑1 (MQ=255)
                                                                              cTGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGa             <  2:3661400/93‑1 (MQ=255)
                                                                               tGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGaa            >  2:5605716/1‑93 (MQ=255)
                                                                               tGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGaa            >  1:6174810/1‑93 (MQ=255)
                                                                               tGCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGAATTTCAGCTTCGCAGGCAAAGGTGaa            >  1:240164/1‑93 (MQ=255)
                                                                                gCCAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGaaa           >  1:1740147/1‑93 (MQ=255)
                                                                                  cAGCAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATc         <  2:6757073/93‑1 (MQ=255)
                                                                                    gCAACTAACAGGGGGCGTACGTACCCGAGTGGAATTAACGCAGACCCAGCTGGAAAATGAGTAATTGAGCTTCGCAGGCAAAAGTTAAAACGa       >  2:6038659/1‑93 (MQ=255)
                                                                                     cAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGat      <  1:4558361/93‑1 (MQ=255)
                                                                                     cAACTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGat      <  2:3271481/93‑1 (MQ=255)
                                                                                      aaCTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGata     <  1:2955430/93‑1 (MQ=255)
                                                                                      aaCTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGata     <  1:8820885/93‑1 (MQ=255)
                                                                                       aCTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGatat    >  1:1621106/1‑93 (MQ=255)
                                                                                        cTGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATc   >  1:6785143/1‑93 (MQ=255)
                                                                                         tGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATcc  <  2:9871182/93‑1 (MQ=255)
                                                                                         tGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATcc  <  2:8840073/93‑1 (MQ=255)
                                                                                         tGACAGGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATcc  >  2:1184336/1‑93 (MQ=255)
                                                                                              |                                                                                        
ACATTTAGCCAAGTGGAGAAAAGGGAAAGTGGGAGCTATGACACAGAGAGAAAAGAAGAAGAGAAAAGAAAACGCCCCTGCCAGCAACTGACAGGGGCGTACGTACCCGAGAGGAATTAACGCAGACCCAGCTGGAAAATCAGCATTTCAGCTTCGCAGGCAAAAGTGAAATCGATATCC  >  NC_000913/2458554‑2458733

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: