| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,460,909 | (C)9→10 | intergenic (+243/‑123) | fadL → / → b2345 | FadL/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,460,900 | 1 | . | C | 76.0% | 495.4 / 167.0 | 205 | intergenic (+234/‑132) | fadL/b2345 | FadL/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (18/31); new base C (87/68); total (106/99) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.17e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 259 total aligned reads displayed.
GTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTA > NC_000913/2460808‑2460991 | gcaTCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑t > 2:1587816/3‑93 (MQ=255)gTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑t < 1:6381858/93‑1 (MQ=255)gTATCCACAGACAAACCTGAAGGGAAAGGCATAGTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑t < 1:4219625/93‑1 (MQ=255) tATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑c > 1:1148018/1‑93 (MQ=255) tATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑c < 1:9500942/93‑1 (MQ=255) aTCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑cc < 2:772245/93‑1 (MQ=255) tCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑ccc > 2:8208889/1‑93 (MQ=255) acaGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑cccccc < 2:8667357/93‑1 (MQ=255) acaGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑cccccc > 2:4292250/1‑93 (MQ=255) acaGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑cccccc > 1:4128235/1‑93 (MQ=255) caGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑ccccccc > 2:9771498/1‑93 (MQ=255) aGACAAACCTGAAGGGAAAGGCAGATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑cccccccc < 1:6072488/93‑1 (MQ=255) aCAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑cccccccccc < 2:991111/93‑2 (MQ=255) cAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑cccccccccct < 2:2152270/93‑3 (MQ=255) aaCCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑cccccccccctgg < 2:9930683/93‑5 (MQ=255) aaCCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑ccccccccccctg > 1:9787210/1‑89 (MQ=255) ccTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑t > 1:571863/1‑93 (MQ=255) cTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑tt > 2:723844/1‑92 (MQ=255) tGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TAt > 2:7974543/1‑93 (MQ=255) tGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TAt < 1:1771386/93‑1 (MQ=255) aaGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TCGC‑TATtg > 1:8507690/1‑93 (MQ=255) aGGTAAAGGCATATTTTCAGGCCTTTTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTCCATTTCCAGGA‑T‑C‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATtgt < 2:6421962/93‑1 (MQ=255) aGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATtgt < 2:2044513/93‑1 (MQ=255) ggtaaaGGCATTTTTTCAGGCGTTCTTCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATtgtg < 1:4322832/90‑1 (MQ=255) gAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑CCCCCCCCC‑TGGC‑TATTGTgcgc < 1:5132976/93‑1 (MQ=255) aaaGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTgcgc > 2:1567710/1‑93 (MQ=255) aGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCa < 1:9774662/93‑1 (MQ=255) ggCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCa < 1:6205088/93‑1 (MQ=255) atatTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATac < 2:9977938/93‑1 (MQ=255) tatTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑CGGC‑TATTGTGCGCTCATcca > 1:7598404/1‑93 (MQ=255) tatTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATacac > 2:9207993/1‑93 (MQ=255) ttttCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGC‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGGGCTCATACACt > 2:934095/1‑93 (MQ=255) taGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCaaa < 1:6912274/92‑1 (MQ=255) cAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCaaa < 2:5962594/93‑1 (MQ=255) cggCGTTCTTCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑ACCC‑C‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCaaa < 2:5320009/92‑1 (MQ=255) aGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑ACCC‑C‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCaaa < 2:3176052/93‑1 (MQ=255) ggCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTa > 2:7622361/1‑93 (MQ=255) ttCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TCCCCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTAAAAATaaa > 2:4342614/1‑93 (MQ=255) ttCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATCCACTCCAATTtaaa > 2:4129562/1‑92 (MQ=255) tCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑CCCCCCCCCATGGG‑TATTGTTCGCTCGTACAGTCAAGTTAACGa > 1:4870590/1‑93 (MQ=255) tCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGAt < 1:4845040/93‑1 (MQ=255) gtGCTCGTACTTCTCAAAGAGTTTACTTGTCTGCATTTCCAGGA‑G‑A‑‑CGC‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGAt < 1:2804892/92‑1 (MQ=255) tcTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑AC‑C‑C‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAg < 1:1752179/92‑1 (MQ=255) gCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAg > 2:8283327/1‑93 (MQ=255) ctctTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGt < 1:4625644/93‑1 (MQ=255) cTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑AC‑C‑C‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAgg < 2:9020227/93‑1 (MQ=255) tCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGt < 1:6947752/93‑1 (MQ=255) tCGGCCTTCCCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑ACCC‑C‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAgg < 2:7881931/93‑1 (MQ=255) cGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGtt < 1:1299927/93‑1 (MQ=255) gTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTc < 2:7051149/93‑1 (MQ=255) gTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTc < 2:2334308/93‑1 (MQ=255) gTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCt > 2:1731994/1‑93 (MQ=255) gTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCt > 1:8779054/1‑93 (MQ=255) tCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATT‑C‑‑C‑C‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCt < 1:6749795/93‑1 (MQ=255) tCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCta > 1:7242253/1‑93 (MQ=255) cTTCTCAAAAATTTTTCTTTTCTGCATTTCCAGGA‑T‑AC‑C‑C‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCtaa < 2:1910093/93‑1 (MQ=255) ttCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTTTGCGCTCATACACTCAAATTAAAGATAGGTTTtaaa > 1:7468330/1‑93 (MQ=255) ttCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCtaaa > 2:2952702/1‑93 (MQ=255) ttCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCtaaa > 1:3172239/1‑93 (MQ=255) cAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑AC‑C‑C‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCtaaataaa < 2:5455885/93‑1 (MQ=255) cAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCtaaataaa > 1:2072873/1‑93 (MQ=255) aaaGAGTTTTCTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TCCCCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCtaaataaa < 1:988860/93‑1 (MQ=255) aaaGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TCCCCCCCCCCC‑TGGC‑AATTGTGCGCCCTTCCACTGCAATTAAAGATAGATTCtaaataat > 1:4949799/1‑92 (MQ=255) aaaGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTaaataaat < 2:1432264/93‑1 (MQ=255) aaaGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTaaataaat < 2:1154255/93‑1 (MQ=255) aaGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTTTGCGCTCATACACTCAAATTAAAGATAGGTTCTaaataaata > 2:9254596/1‑92 (MQ=255) agagTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTTTGCGCTCATACACTCAAATTAAAGATAGGTTTTAAATAAATGa > 2:814196/1‑93 (MQ=255) agagTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGGTATGTGCTaaataaataa > 2:5802615/1‑91 (MQ=255) gagTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAg > 2:5120404/1‑93 (MQ=255) gagTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAg > 2:5728497/1‑93 (MQ=255) agTTTACTTTTCTGCATTTCCAGGA‑T‑AC‑C‑C‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGc < 2:2764034/93‑1 (MQ=255) gTTTACTTTTGTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCg < 1:9233892/93‑1 (MQ=255) gTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TCCCCCCCCCCC‑CGCCTTTTTGTGCGCCCATACACTCAAATTAAAAATGGTTTTTAAATAAATGAg > 2:3411051/1‑93 (MQ=255) tttACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGt > 1:8147653/1‑93 (MQ=255) tttACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGt > 1:5882185/1‑93 (MQ=255) tACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑GGGC‑ATTTGGGGGCCCAAACCCCCAAA‑TAAAGATAGGGTTTAAATAAAAGGACGtttt > 2:2805047/1‑93 (MQ=255) tACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGtttt > 1:7827177/1‑93 (MQ=255) ttttGTGCATTTCCAGGA‑T‑C‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGtttttt < 1:2503263/93‑1 (MQ=255) ttttCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGtttttt > 2:4458926/1‑93 (MQ=255) ttCTGCATTTCCAGGA‑TCC‑‑C‑C‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGa < 1:8392782/93‑1 (MQ=255) ttCTGCATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGa < 2:8473245/93‑1 (MQ=255) tCTGCATTTCCAGGA‑T‑A‑‑CGC‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGAt < 2:9853284/93‑1 (MQ=255) cTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAg < 2:4608966/93‑1 (MQ=255) cATTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTc < 1:1072790/93‑1 (MQ=255) aTTTCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAACTTACCGCTGGGTTCTAAATAAATCAGGGTTTTTTGAAATTCt > 1:6258657/1‑93 (MQ=255) tttCCCGGA‑T‑AC‑C‑C‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTa < 2:6557580/93‑1 (MQ=255) tttCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACCCTCAAATTAAAGATAGGTTCTAAATAAATAAGGGTTTTTTGATAGtttt > 2:8357586/1‑90 (MQ=255) tttCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCtt > 2:4474642/1‑92 (MQ=255) tttCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTa < 2:5478547/93‑1 (MQ=255) tttCCAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTa < 2:3003061/93‑1 (MQ=255) tttCCAGGA‑T‑A‑‑C‑T‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTAt < 1:6014176/93‑1 (MQ=255) ccAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCCTACACTCAAATTAAAAAAAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTAttt > 2:6114847/1‑93 (MQ=255) ccAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTAttt < 1:6151995/93‑1 (MQ=255) ccAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTAttt > 1:2702186/1‑93 (MQ=255) ccAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTAttt > 1:1001249/1‑93 (MQ=255) cAGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑CATTTTGCGCTCATACACTCAAATTAAAAATAAGGTCTAAATAAAATAGGGTTTTTTTTTAGTTTAtttt > 2:67278/1‑92 (MQ=255) aGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCa > 1:3462800/1‑93 (MQ=255) aGGA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCa < 2:367525/93‑1 (MQ=255) gA‑T‑A‑‑C‑TC‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCAtt > 1:4472611/1‑93 (MQ=255) t‑A‑‑C‑T‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAgg > 1:5640375/1‑93 (MQ=255) | GTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGA‑T‑A‑‑C‑T‑‑CCCCCCCCC‑TGGC‑TATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTA > NC_000913/2460808‑2460991 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |