| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,501,888 | +C | coding (618/2496 nt) | b2383 ← | putative PTS system enzyme IIA component, enzyme I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,501,884 | 1 | . | C | 99.0% | 617.0 / ‑1.6 | 197 | coding (622/2496 nt) | b2383 | putative PTS system enzyme IIA component, enzyme I |
| Reads supporting (aligned to +/- strand): ref base . (2/0); new base C (98/97); total (100/97) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.98e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01 | |||||||||||
Only 100 of 235 total aligned reads displayed.
AATGTCGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑CC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGT > NC_000913/2501792‑2501971 | aaTGTCGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAg > 2:7412509/1‑93 (MQ=255) aTGTCGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑c < 1:7038548/93‑1 (MQ=255) aTGTCGCTAACACGTTCGCGCAGATAAGCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑c < 1:6010949/93‑1 (MQ=255) cGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑cc‑ccc > 2:4619191/1‑92 (MQ=255) cGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑cc‑ccc > 1:2278184/1‑92 (MQ=255) cGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑cc‑ccc < 1:4786155/93‑2 (MQ=255) gCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑cc‑ccct < 2:6301005/93‑3 (MQ=255) gCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑cc‑ccct < 2:4935330/93‑3 (MQ=255) cTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑cc‑ccctg > 1:9106514/1‑90 (MQ=255) tAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑cc‑ccctga < 1:5171570/93‑5 (MQ=255) tAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑cc‑ccctga > 2:5319302/1‑89 (MQ=255) tAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑cc‑ccctga > 2:2320157/1‑89 (MQ=255) tAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑cc‑ccctga > 2:8377080/1‑89 (MQ=255) acacGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATg > 2:282701/1‑93 (MQ=255) acacGTTCGCGCAAATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATg < 1:6498179/93‑1 (MQ=255) ttCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGtt > 2:8479189/1‑93 (MQ=255) ttCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGtt > 1:2849140/1‑93 (MQ=255) cgcAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGt > 2:9114632/1‑93 (MQ=255) gcAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGtc < 2:7303610/93‑1 (MQ=255) aGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGtcat < 1:8511953/93‑1 (MQ=255) aGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGtcat < 1:1702453/93‑1 (MQ=255) aGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGtcat < 2:9013052/93‑1 (MQ=255) gATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGtcatc > 2:1206754/1‑93 (MQ=255) gATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGtcatc > 2:6534689/1‑93 (MQ=255) aTAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGtcatca > 1:8090432/1‑93 (MQ=255) aTCGCTGGCATAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGc > 1:9886678/1‑93 (MQ=255) aTCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGc > 1:5939571/1‑93 (MQ=255) tCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCg < 1:2385786/93‑1 (MQ=255) tCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCg > 2:1347028/1‑93 (MQ=255) cGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGa < 2:1967155/93‑1 (MQ=255) gCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGAc < 1:7299758/93‑1 (MQ=255) gCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGAc > 2:5841392/1‑93 (MQ=255) gCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGAc > 1:4362581/1‑93 (MQ=255) gCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGAc > 1:3103724/1‑93 (MQ=255) tGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACgg > 2:3571007/1‑93 (MQ=255) tGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACgg > 2:4313211/1‑93 (MQ=255) tGGCAGAGGCAGAAAGTTTGGAGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACgg > 1:9514901/1‑93 (MQ=255) ggcagaggcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑CCACCTGATGCTGTTCTGTCATCAGGCGACGGa > 2:897139/1‑93 (MQ=255) gcagaggcagaAAGTTTGGCCCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGat < 2:2691541/93‑1 (MQ=255) cagaggcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCTCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGata < 1:4091546/93‑1 (MQ=255) cagaggcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGata < 2:6247052/93‑1 (MQ=255) agaggcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGatat < 1:365884/93‑1 (MQ=255) gaggcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATAtt > 2:872147/1‑93 (MQ=255) gaggcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATAtt > 2:7237627/1‑93 (MQ=255) ggcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGc < 2:6243220/93‑1 (MQ=255) ggcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGc > 2:6351132/1‑93 (MQ=255) gcagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGcc > 2:1422710/1‑93 (MQ=255) cagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCt < 2:5594426/93‑1 (MQ=255) cagaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTAATCAGGCGACGGATATTGCCt < 2:6025519/93‑1 (MQ=255) agaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTg > 2:8206989/1‑93 (MQ=255) agaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTg > 1:1515242/1‑93 (MQ=255) gaAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGc < 1:5519027/93‑1 (MQ=255) gTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAAt > 2:2912988/1‑93 (MQ=255) gTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCACGCGACGGATATTGACTGCAAAt > 2:1107497/1‑93 (MQ=255) tttGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAAtt > 1:4856642/1‑93 (MQ=255) gttcgcgcAAACCTGCTTCATATTGCTGATGATCGCCCTCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAAtt < 1:6735028/89‑1 (MQ=255) tGGCGCAAACCTGCTTCATATTGCTGAGGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCCGGCAACAGGCGACGGATATTGCCTGCAAATtca < 2:5262125/93‑1 (MQ=255) tGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATtca < 2:6680411/93‑1 (MQ=255) ggCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATtcat < 1:4811240/93‑1 (MQ=255) ggCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATtcat < 1:10023951/93‑1 (MQ=255) cgcAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATtcatca < 1:1021307/93‑1 (MQ=255) cgcAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATtcatca < 2:6796460/93‑1 (MQ=255) cgcAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATtcatca < 1:9553160/93‑1 (MQ=255) gcAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTcatcat < 1:6166676/93‑1 (MQ=255) gcAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTcatcat > 2:939521/1‑93 (MQ=255) cAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCatcatc > 2:904791/1‑93 (MQ=255) cAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGAGACGGATATTGCCTGCAAATTCatcatc > 1:2470532/1‑93 (MQ=255) aaaCCTGCTCCATATTGCTGATGATCGCCTCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATcc < 1:9783346/93‑1 (MQ=255) aaaCCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATcc < 2:3824226/93‑1 (MQ=255) aaaCCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATcc > 2:1649865/1‑93 (MQ=255) aaCCTGCTCCATATTGCTGATTGTCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCt > 1:1832866/1‑93 (MQ=255) aaCCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCt > 2:3307517/1‑93 (MQ=255) aaCCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCt > 2:5838339/1‑93 (MQ=255) aCCTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTg > 1:8433528/1‑93 (MQ=255) ccTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGa < 1:7400396/93‑1 (MQ=255) cTGCTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGaa > 2:9328715/1‑93 (MQ=255) cTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCa > 1:3199999/1‑93 (MQ=255) cTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCa < 1:4607174/93‑1 (MQ=255) cTCCATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCa < 1:6621388/93‑1 (MQ=255) ccATATTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGc < 1:9346670/93‑1 (MQ=255) atatTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGa > 2:3502603/1‑93 (MQ=255) tatTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGAc > 2:3855378/1‑93 (MQ=255) atTGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACa < 2:9729345/93‑1 (MQ=255) tGCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACaaa < 1:5422930/93‑1 (MQ=255) gCTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAAt < 1:7584181/93‑1 (MQ=255) cTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATg < 1:3358009/93‑1 (MQ=255) cTGATGATCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATg < 2:5713459/93‑1 (MQ=255) gatgatCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATggg > 2:4057395/1‑93 (MQ=255) atgatCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGgc < 2:2248395/93‑1 (MQ=255) gatCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGgcgc < 1:714673/93‑1 (MQ=255) gatCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGgcgc > 1:2974750/1‑93 (MQ=255) gatCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGgcgc > 1:2001473/1‑93 (MQ=255) gatCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGgcgc < 2:145941/93‑1 (MQ=255) tCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTg > 1:4450479/1‑93 (MQ=255) tCGCCGCCCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTg < 2:7938681/93‑1 (MQ=255) gccgccCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGGGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAg > 1:2815735/1‑93 (MQ=255) gccgccCCCAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAg < 1:8377081/93‑1 (MQ=255) ccccAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAg < 1:8293147/93‑1 (MQ=255) ccccAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAg < 2:8102287/93‑1 (MQ=255) cccAGCCC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGt > 2:9179703/1‑93 (MQ=255) | AATGTCGCTAACACGTTCGCGCAGATAATCGCTGGCAGAGGCAGAAAGTTTGGCGCAAACCTGCTCCATATTGCTGATGATCGCCGCCCCCAG‑CC‑CCTGATGCTGTTCTGTCATCAGGCGACGGATATTGCCTGCAAATTCATCATCCTGAATCAGCGACAAATGGGCGCTGAGGATAGT > NC_000913/2501792‑2501971 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |