Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,184,181 (T)5→6 intergenic (+200/‑22) ygiL → / → yi215 putative fimbrial‑like protein/IS2 hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,184,1761.T100.0% 304.6 / NA 94intergenic (+195/‑27)ygiL/yi215putative fimbrial‑like protein/IS2 hypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base T (60/34);  total (60/34)

Only 100 of 156 total aligned reads displayed.

AAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TT‑TTTAGACTAGTCATTGGAGAACA  >  NC_000913/3184084‑3184201
                                                                                             |                          
aaaaTATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAg                             >  2:6155498/1‑93 (MQ=255)
aaaaTATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAg                             <  2:7461723/93‑1 (MQ=255)
aaaaTATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAg                             >  1:1503109/1‑93 (MQ=255)
 aaaTATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑t                           <  1:7091790/93‑1 (MQ=255)
 aaaTATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑t                           >  1:4683787/1‑93 (MQ=255)
  aaTATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt                          <  1:9509021/93‑1 (MQ=255)
  aaTATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt                          >  1:6066134/1‑93 (MQ=255)
  aaTATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt                          >  1:6066133/1‑93 (MQ=255)
  aaTATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt                          >  1:4985632/1‑93 (MQ=255)
   atatTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt‑t                        >  1:635610/1‑93 (MQ=255)
   atatTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt‑t                        >  2:2454160/1‑93 (MQ=255)
   atatTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt‑t                        >  2:6434531/1‑93 (MQ=255)
    tatttattGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt‑tt                       <  1:1713306/93‑1 (MQ=255)
    tatttattGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt‑tt                       <  1:367504/93‑1 (MQ=255)
    tatttattGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt‑tt                       <  2:4539410/93‑1 (MQ=255)
    tatttattGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt‑tt                       >  1:7344303/1‑93 (MQ=255)
     atttattGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt‑ttt                      >  1:8712218/1‑93 (MQ=255)
     atttattGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt‑ttt                      <  1:2023478/93‑1 (MQ=255)
     atttattGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt‑ttt                      <  2:2402697/93‑1 (MQ=255)
     atttattGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt‑ttt                      >  2:2222940/1‑93 (MQ=255)
     atttattGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt‑ttt                      <  2:5251773/93‑1 (MQ=255)
     atttattGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt‑ttt                      <  2:6165557/93‑1 (MQ=255)
      tttattGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt‑tttt                     <  1:8713080/93‑2 (MQ=255)
      tttattGTGCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACACCCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt‑tttt                     <  2:454249/93‑2 (MQ=255)
       ttattGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt‑tttta                    >  2:8632385/1‑91 (MQ=255)
       ttattGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt‑tttta                    <  1:4784062/93‑3 (MQ=255)
       ttattGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt‑tttta                    <  2:7793877/93‑3 (MQ=255)
       ttattGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt‑tttta                    >  1:5964604/1‑91 (MQ=255)
       ttattGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt‑tttta                    <  2:7793876/93‑3 (MQ=255)
       ttattGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt‑tttta                    <  1:2635877/93‑3 (MQ=255)
         attGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt‑ttttaga                  <  1:7310379/93‑5 (MQ=255)
         attGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt‑ttttaga                  <  2:9119157/93‑5 (MQ=255)
         attGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt‑ttttaga                  >  2:1608329/1‑89 (MQ=255)
         attGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt‑ttttaga                  <  1:1915112/93‑5 (MQ=255)
         attGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt‑ttttaga                  <  2:4899278/93‑5 (MQ=255)
         attGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt‑ttttaga                  <  2:3944406/93‑5 (MQ=255)
         attGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt‑ttttaga                  <  2:6565543/93‑5 (MQ=255)
         attGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt‑ttttaga                  >  1:2373047/1‑89 (MQ=255)
         attGTTCATTATCCGATATTAGACTGGCCCCATGAATCTCCTGACAACCAATATCACTTAAATAAGTGATAGTCTTTATAATAG‑tt‑ttttagg                  <  2:8981837/93‑5 (MQ=17)
           tGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACt                 >  1:3277363/1‑93 (MQ=255)
           tGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACt                 >  1:9420842/1‑93 (MQ=255)
           tGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACt                 <  1:9711907/93‑1 (MQ=255)
           tGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACt                 >  1:3160922/1‑93 (MQ=255)
           tGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACt                 >  1:8371663/1‑93 (MQ=255)
            gTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTa                <  1:5104296/93‑1 (MQ=255)
             ttCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAg               >  1:2686984/1‑93 (MQ=255)
             ttCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAg               <  2:1018624/93‑1 (MQ=255)
              tCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGt              >  2:5856774/1‑93 (MQ=255)
              tCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGt              >  2:3457165/1‑93 (MQ=255)
              tCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGt              >  2:5300359/1‑93 (MQ=255)
              tCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGt              >  1:7155873/1‑93 (MQ=255)
              tCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGt              <  2:4454888/93‑1 (MQ=255)
              tCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGt              <  2:4582340/93‑1 (MQ=255)
              tCATTATCCGCTATTAGACTGGCCCCCTGAATCTCCAGGCAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGt              >  2:4078416/1‑93 (MQ=14)
               cATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTc             >  2:7197761/1‑93 (MQ=255)
               cATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTc             <  1:6236106/93‑1 (MQ=255)
               cATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTc             >  1:569507/1‑93 (MQ=255)
               cATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTc             <  1:5262214/93‑1 (MQ=255)
               cATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTc             >  2:2028820/1‑93 (MQ=255)
               cATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTc             >  1:3760334/1‑93 (MQ=255)
                aTTCTCCGTTATTAGACTGGCCCCCTGAATATCCAGACAACCAATATCACTTCAATAAGTAATAGTCTTAATACTAGTTT‑TTTAGACTAGTCa            >  2:7638520/1‑93 (MQ=14)
                aTTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCa            <  2:4623022/93‑1 (MQ=255)
                aTTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCa            >  2:146358/1‑93 (MQ=255)
                aTTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCa            >  1:5555117/1‑93 (MQ=255)
                aTTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCa            <  1:3983999/93‑1 (MQ=255)
                aTTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCa            <  1:230085/93‑1 (MQ=255)
                 ttATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCAt           <  1:6201802/93‑1 (MQ=255)
                 ttATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCAt           >  1:5035467/1‑93 (MQ=255)
                 ttATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCAt           >  2:4207835/1‑93 (MQ=255)
                 ttATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCAt           >  2:9194909/1‑93 (MQ=255)
                 ttATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCAt           >  1:1500091/1‑93 (MQ=255)
                  tATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCAtt          <  1:9088017/93‑1 (MQ=255)
                  gaTCCGGTATGAGACTGTCCCCCTGAATCTCCAGACAACCAACATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTGTTTAGACTTGTCAtt          >  2:8981754/2‑93 (MQ=11)
                   aTCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCATTg         <  2:9495762/93‑1 (MQ=255)
                   aTCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCATTg         >  1:9999951/1‑93 (MQ=255)
                   aTCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCATTg         >  2:3359150/1‑93 (MQ=255)
                   aTCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCATTg         >  2:1964167/1‑93 (MQ=255)
                   aTCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCATTg         <  2:1781470/93‑1 (MQ=255)
                    tCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCATTgg        >  2:5929674/1‑93 (MQ=255)
                    tCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCATTgg        <  2:1509304/93‑1 (MQ=255)
                     ccGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCATTGga       <  1:2505565/93‑1 (MQ=255)
                     ccGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCATTGga       <  2:7558365/93‑1 (MQ=255)
                       gTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCATTGgaga     >  2:363820/1‑93 (MQ=255)
                       gTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCATTGgaga     >  2:3152533/1‑93 (MQ=255)
                       gTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCATTGgaga     >  2:3122361/1‑93 (MQ=255)
                       gTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCATTGgaga     <  1:5871287/93‑1 (MQ=255)
                       gTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCATTGgaga     >  2:8104587/1‑93 (MQ=255)
                        ttattaGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCATTGGAGaa    >  1:1410368/1‑93 (MQ=16)
                        ttattaGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCATTGGAGaa    >  1:4224337/1‑93 (MQ=16)
                        ttattaGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCATTGGAGaa    >  1:9067036/1‑93 (MQ=16)
                        ttattaGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCATTGGAGaa    <  2:6550923/93‑1 (MQ=16)
                         tattaGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCATTGGAGAAc   >  1:8120721/1‑93 (MQ=12)
                         tattaGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCATTGGAGAAc   >  1:8120720/1‑93 (MQ=12)
                         tattaGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCATTGGAGAAc   >  1:139237/1‑93 (MQ=12)
                         tattaGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCATTGGAGAAc   <  1:2182647/93‑1 (MQ=12)
                          attaGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCATTGGAGAACa  <  2:7961988/93‑1 (MQ=9)
                          attaGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCATTGGAGAACa  >  1:7657199/1‑93 (MQ=9)
                          attaGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCATTGGAGAACa  >  2:5446156/1‑93 (MQ=9)
                          attaGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCATTGGAGAACa  >  2:3775792/1‑93 (MQ=9)
                          attaGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTT‑TTTAGACTAGTCATTCGAGAACa  >  1:7713382/1‑93 (MQ=255)
                                                                                             |                          
AAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TT‑TTTAGACTAGTCATTGGAGAACA  >  NC_000913/3184084‑3184201

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑